| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386896
Identifier: 119386896
GI number: 119386896
Start: 1346993
End: 1348057
Strand: Direct
Name: 119386896
Synonym: Pden_4191
Alternate gene names: NA
Gene position: 1346993-1348057 (Clockwise)
Preceding gene: 119386891
Following gene: 119386897
Centisome position: 77.86
GC content: 72.96
Gene sequence:
>1065_bases TTGCTTCATGCGCATGGCCTGCGCATCGGAAAGCGGCCCGGGTTCCGTAGCGTCCGCCCGCCGGCATCCGGCAGCGCCGC GGAATGTTTGCCATTCGTCCCGCCAGCGGGCGCGGGAAATTCACGCCGCAATCACAGGCTTGCGCGAAGATCGGGAAAGC CCTCTGCCAAGGACACCCGCGACGCGATGGAAAAACCCGGCCCCCGCGCCCCCGACCTGACCGAAAACTGGCAACGCCAT GACTGGCGCGAAAGCTTCTTTGCCCCCGGCTTCGTCATCCTGCAGGCGCTGACCCGGGACGGCCGCACCGCCAGCGGCGC CGGCCGGAACCGGGACGAAGCCTTCGACCGCTGCATCGGCGAGACCGCCGAGATCCTGGCGCTGGCCGCCTTTCGCGCCG GGGGCGGAGCGTTCGAGCCCTGGCGCGACGGGCTGGCGGCGCATCTCGATCCCGGCCCGGCGCGCGAGGCCGCGATGGAC GAGGCCTGCGAACGGCGCGCGGTCGCGGATTGGTGGCTGGGCCGGCGTCCCGCCGTGCCGGTGGCTGCGGAATGGGTTCG GCAGGCCGGGCTGGCCGCACAGCTTGATCGCGCGCGCGACGGGGCGGCGCTGCGGCGGCGCACCGACTGGTGGCAGATCG GGGCCGCGGGCGACCCTCGCATCATGATCTGCCGCAGCATGAGCCCCGAGGGGCAGGACCCGGTGCTGGGCTATGGCGCC CATCGCGATCCGGTGCGGGCGGCCGGGAAAGCCCTGCGCGAGCTGCTGCTGATGGAGTTGAACCTGATGGAGCTGCTGGC CGCCCGCTCCTTCGGCCGCGAGGGCGCGCTGCAAGCGGTGCGCAACCGCATCCGCGGCTATGCCCGCCGCGCCGCCCTGC TGTTCCCCGAGGCCGTCGCCATCCATCCCGCGCCGCCGGGCGATGCGGATGCCGGCGGCTGCTTCGACACCCCGCCCGCC TGCCATGAGATCTCGCCGCCCGAAGGGCCGCTCAGCGTCTGGATCTGCCGTCCCGACGCAGCCGCGCCGCCTTTCACCGA CGAGACGGGCCTGCCCTATCTGTGA
Upstream 100 bases:
>100_bases GCAGCAGGCAGACACCGCGCCGGTCACCGCGGCTCTGTCGCATTGTTTTATGAAAATTCAATGACACCAGTATGTAATAT TCAAATTATGATGTTGTTTC
Downstream 100 bases:
>100_bases GGATTGCGATGCGCGACGACAGCCTGGCCAGAAACCTGCGGGCACCGGGACCGGGGCAAGGCGGCTGCCCCATGGGCTGC GCGCCGCTGATGGGGTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MLHAHGLRIGKRPGFRSVRPPASGSAAECLPFVPPAGAGNSRRNHRLARRSGKPSAKDTRDAMEKPGPRAPDLTENWQRH DWRESFFAPGFVILQALTRDGRTASGAGRNRDEAFDRCIGETAEILALAAFRAGGGAFEPWRDGLAAHLDPGPAREAAMD EACERRAVADWWLGRRPAVPVAAEWVRQAGLAAQLDRARDGAALRRRTDWWQIGAAGDPRIMICRSMSPEGQDPVLGYGA HRDPVRAAGKALRELLLMELNLMELLAARSFGREGALQAVRNRIRGYARRAALLFPEAVAIHPAPPGDADAGGCFDTPPA CHEISPPEGPLSVWICRPDAAAPPFTDETGLPYL
Sequences:
>Translated_354_residues MLHAHGLRIGKRPGFRSVRPPASGSAAECLPFVPPAGAGNSRRNHRLARRSGKPSAKDTRDAMEKPGPRAPDLTENWQRH DWRESFFAPGFVILQALTRDGRTASGAGRNRDEAFDRCIGETAEILALAAFRAGGGAFEPWRDGLAAHLDPGPAREAAMD EACERRAVADWWLGRRPAVPVAAEWVRQAGLAAQLDRARDGAALRRRTDWWQIGAAGDPRIMICRSMSPEGQDPVLGYGA HRDPVRAAGKALRELLLMELNLMELLAARSFGREGALQAVRNRIRGYARRAALLFPEAVAIHPAPPGDADAGGCFDTPPA CHEISPPEGPLSVWICRPDAAAPPFTDETGLPYL >Mature_354_residues MLHAHGLRIGKRPGFRSVRPPASGSAAECLPFVPPAGAGNSRRNHRLARRSGKPSAKDTRDAMEKPGPRAPDLTENWQRH DWRESFFAPGFVILQALTRDGRTASGAGRNRDEAFDRCIGETAEILALAAFRAGGGAFEPWRDGLAAHLDPGPAREAAMD EACERRAVADWWLGRRPAVPVAAEWVRQAGLAAQLDRARDGAALRRRTDWWQIGAAGDPRIMICRSMSPEGQDPVLGYGA HRDPVRAAGKALRELLLMELNLMELLAARSFGREGALQAVRNRIRGYARRAALLFPEAVAIHPAPPGDADAGGCFDTPPA CHEISPPEGPLSVWICRPDAAAPPFTDETGLPYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38363; Mature: 38363
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHAHGLRIGKRPGFRSVRPPASGSAAECLPFVPPAGAGNSRRNHRLARRSGKPSAKDTR CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHH DAMEKPGPRAPDLTENWQRHDWRESFFAPGFVILQALTRDGRTASGAGRNRDEAFDRCIG HHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ETAEILALAAFRAGGGAFEPWRDGLAAHLDPGPAREAAMDEACERRAVADWWLGRRPAVP HHHHHHHHHHHHCCCCCCCHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC VAAEWVRQAGLAAQLDRARDGAALRRRTDWWQIGAAGDPRIMICRSMSPEGQDPVLGYGA HHHHHHHHHCHHHHHHHHHCCHHHHHCCCCEEECCCCCCCEEEEECCCCCCCCCEECCCC HRDPVRAAGKALRELLLMELNLMELLAARSFGREGALQAVRNRIRGYARRAALLFPEAVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE IHPAPPGDADAGGCFDTPPACHEISPPEGPLSVWICRPDAAAPPFTDETGLPYL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLHAHGLRIGKRPGFRSVRPPASGSAAECLPFVPPAGAGNSRRNHRLARRSGKPSAKDTR CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHH DAMEKPGPRAPDLTENWQRHDWRESFFAPGFVILQALTRDGRTASGAGRNRDEAFDRCIG HHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ETAEILALAAFRAGGGAFEPWRDGLAAHLDPGPAREAAMDEACERRAVADWWLGRRPAVP HHHHHHHHHHHHCCCCCCCHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC VAAEWVRQAGLAAQLDRARDGAALRRRTDWWQIGAAGDPRIMICRSMSPEGQDPVLGYGA HHHHHHHHHCHHHHHHHHHCCHHHHHCCCCEEECCCCCCCEEEEECCCCCCCCCEECCCC HRDPVRAAGKALRELLLMELNLMELLAARSFGREGALQAVRNRIRGYARRAALLFPEAVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE IHPAPPGDADAGGCFDTPPACHEISPPEGPLSVWICRPDAAAPPFTDETGLPYL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA