| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386898
Identifier: 119386898
GI number: 119386898
Start: 1349495
End: 1350223
Strand: Direct
Name: 119386898
Synonym: Pden_4193
Alternate gene names: NA
Gene position: 1349495-1350223 (Clockwise)
Preceding gene: 119386897
Following gene: 119386905
Centisome position: 78.0
GC content: 67.76
Gene sequence:
>729_bases ATGACAGGGACGCGCCGCAAATACATCATCATCGGGGCCGAGGTGGACCAGCCCGAGGCGTGGCTGCACAAGGACGGCAG CATCAACGCCAAAAAGGGCGGCGACGGCGAGCCGCTGAACGTCGAATATATCGGCCGGCTGATGGTCGATCTGTCGCAGC GCGGCAAGTCCGGCGTGCCCAAGGCCGAACTGGACGCGCTGGAGGAACGCATCAAGCGCGCGCTGGTGGTGCAGGATTTC TCGGCTCATGACGGCACGGCGCCGCTGAGCGATGCCGAGCGAGAGGCGATCCTGGACGCCACCACCGTCCGCATCGAGTT CGAAAGCCGCCGCCGCGGCAGCAAAAAGCCCGACCGCAACACCCGCATCCTGGTCGTGCCCTCGGACGAGACGCTGGCCA TCGCCGATGCCATGCTGCGCGCCCAGGGCGAGGCCGAGGGGTTTCGCCCGCCGCTGTCCTATGAACTGGACCGGGCGCTG ATGCTGGCCGGCATGCAGACCGAGATCATGGAGATGGTGCGTGAGTTCGCCGCCCGCGCCGAGCCGGGCTGGACCCCGGC GCTGCAAACCGCGCTGGAGGCGCATGTCGAGCAGGCGATCCGCGAGCGCAGCCGCTTCAAGGACGCCAGCGGCAGGCCGG CCAGGGACGTGAAGAACGAGATCATGTCGAGCCCCCTGCGCGCCTTTCACCGCTCGGTCGGGATCTATGCCACGAACATG TGCCGCTAG
Upstream 100 bases:
>100_bases GTCGTGCTGGCGCCCGAAACCGAAGCGACCGCCGGCCTGCCCCGGCCCGCGACCATGCTGGAACTGATCACGCTTGCCAG GCAATAACGGAGAAACGACC
Downstream 100 bases:
>100_bases GCGTGAAAGCGGCAACTGGACGCGCCGGCCTGTTCCAGCGTCTCGCGCAGCTCTTGCCGCCAGTCTTCGTTGCGCAGGGG AAAGATGGACAGGAACCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTGTRRKYIIIGAEVDQPEAWLHKDGSINAKKGGDGEPLNVEYIGRLMVDLSQRGKSGVPKAELDALEERIKRALVVQDF SAHDGTAPLSDAEREAILDATTVRIEFESRRRGSKKPDRNTRILVVPSDETLAIADAMLRAQGEAEGFRPPLSYELDRAL MLAGMQTEIMEMVREFAARAEPGWTPALQTALEAHVEQAIRERSRFKDASGRPARDVKNEIMSSPLRAFHRSVGIYATNM CR
Sequences:
>Translated_242_residues MTGTRRKYIIIGAEVDQPEAWLHKDGSINAKKGGDGEPLNVEYIGRLMVDLSQRGKSGVPKAELDALEERIKRALVVQDF SAHDGTAPLSDAEREAILDATTVRIEFESRRRGSKKPDRNTRILVVPSDETLAIADAMLRAQGEAEGFRPPLSYELDRAL MLAGMQTEIMEMVREFAARAEPGWTPALQTALEAHVEQAIRERSRFKDASGRPARDVKNEIMSSPLRAFHRSVGIYATNM CR >Mature_241_residues TGTRRKYIIIGAEVDQPEAWLHKDGSINAKKGGDGEPLNVEYIGRLMVDLSQRGKSGVPKAELDALEERIKRALVVQDFS AHDGTAPLSDAEREAILDATTVRIEFESRRRGSKKPDRNTRILVVPSDETLAIADAMLRAQGEAEGFRPPLSYELDRALM LAGMQTEIMEMVREFAARAEPGWTPALQTALEAHVEQAIRERSRFKDASGRPARDVKNEIMSSPLRAFHRSVGIYATNMC R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26944; Mature: 26813
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTRRKYIIIGAEVDQPEAWLHKDGSINAKKGGDGEPLNVEYIGRLMVDLSQRGKSGVP CCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC KAELDALEERIKRALVVQDFSAHDGTAPLSDAEREAILDATTVRIEFESRRRGSKKPDRN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCEEEEEEEEHHHHCCCCCCCCC TRILVVPSDETLAIADAMLRAQGEAEGFRPPLSYELDRALMLAGMQTEIMEMVREFAARA CEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC EPGWTPALQTALEAHVEQAIRERSRFKDASGRPARDVKNEIMSSPLRAFHRSVGIYATNM CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCC CR CC >Mature Secondary Structure TGTRRKYIIIGAEVDQPEAWLHKDGSINAKKGGDGEPLNVEYIGRLMVDLSQRGKSGVP CCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC KAELDALEERIKRALVVQDFSAHDGTAPLSDAEREAILDATTVRIEFESRRRGSKKPDRN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCEEEEEEEEHHHHCCCCCCCCC TRILVVPSDETLAIADAMLRAQGEAEGFRPPLSYELDRALMLAGMQTEIMEMVREFAARA CEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC EPGWTPALQTALEAHVEQAIRERSRFKDASGRPARDVKNEIMSSPLRAFHRSVGIYATNM CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCC CR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA