Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386793

Identifier: 119386793

GI number: 119386793

Start: 1241928

End: 1242326

Strand: Direct

Name: 119386793

Synonym: Pden_4086

Alternate gene names: NA

Gene position: 1241928-1242326 (Clockwise)

Preceding gene: 119386788

Following gene: 119386799

Centisome position: 71.78

GC content: 64.41

Gene sequence:

>399_bases
ATGAGTGACGATCTGATTGAGCGGCTGCGCACCATCACAAGCAGCGGCTGCAATCCATATTCGGCGTGCCACGAAGCCGC
CGTTGAACTCGCCCGCCTCCGCGCCGAGGTGGAGAGGCTGCGCGGGGTGCTGCGAAAGCGGACGGAGGAAGCCGACAGAG
CCGACGAACGCGCCGACAAGGCCGAAGCCGCCCTAGCCGACGAGCGGGCGCATGCGGACGCGCTGGCCGCCGCCTTGCAC
AATGCAGTGAAGGCGCTGGAAATGGTCACGGATCAAAACGCGATCAAGAACAGCCGCGTCGATATCGCCTTTGCTGCCTG
CGTCGAGGCGGCATCGATCGGCAGAAAAGCCCTGTCGGATCAAAACCCGATCAAAAACCGCGCCCGGCGTCAGGGGTGA

Upstream 100 bases:

>100_bases
GGCAATGGTGGGAGGGTGGATGGGTTGATAGCATGAGCGAATGGATTGAGCCGCAGCCCACCCACTGGCTTCCCCTCCCC
CAGCCCCCGGAGGACGCGCG

Downstream 100 bases:

>100_bases
CAGCCGGCCTCAAGCTGGTCCAGCAGCCGCAGCCCTGCCCGCTGGGACCGCGCCCCGCCGTCCTCGATCAGCGCGGCAGC
CAGCGCCTTGCGGGACGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSDDLIERLRTITSSGCNPYSACHEAAVELARLRAEVERLRGVLRKRTEEADRADERADKAEAALADERAHADALAAALH
NAVKALEMVTDQNAIKNSRVDIAFAACVEAASIGRKALSDQNPIKNRARRQG

Sequences:

>Translated_132_residues
MSDDLIERLRTITSSGCNPYSACHEAAVELARLRAEVERLRGVLRKRTEEADRADERADKAEAALADERAHADALAAALH
NAVKALEMVTDQNAIKNSRVDIAFAACVEAASIGRKALSDQNPIKNRARRQG
>Mature_131_residues
SDDLIERLRTITSSGCNPYSACHEAAVELARLRAEVERLRGVLRKRTEEADRADERADKAEAALADERAHADALAAALHN
AVKALEMVTDQNAIKNSRVDIAFAACVEAASIGRKALSDQNPIKNRARRQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14393; Mature: 14262

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDLIERLRTITSSGCNPYSACHEAAVELARLRAEVERLRGVLRKRTEEADRADERADK
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEAALADERAHADALAAALHNAVKALEMVTDQNAIKNSRVDIAFAACVEAASIGRKALSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
QNPIKNRARRQG
CCHHHHHHHCCC
>Mature Secondary Structure 
SDDLIERLRTITSSGCNPYSACHEAAVELARLRAEVERLRGVLRKRTEEADRADERADK
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEAALADERAHADALAAALHNAVKALEMVTDQNAIKNSRVDIAFAACVEAASIGRKALSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
QNPIKNRARRQG
CCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA