Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386799

Identifier: 119386799

GI number: 119386799

Start: 1247347

End: 1247706

Strand: Direct

Name: 119386799

Synonym: Pden_4092

Alternate gene names: NA

Gene position: 1247347-1247706 (Clockwise)

Preceding gene: 119386793

Following gene: 119386802

Centisome position: 72.1

GC content: 60.28

Gene sequence:

>360_bases
ATGCAAGCGATTGTTCTGGCTCTGGTGGTGGCGGTCGCAGGGTGCGCGTCGAGCATCATGCAGTCCTATGTCGGCAAGGA
CATTACCGAGGCGGCTATGGACTATGGGCCGCCGGCCGGCGTGATGGATCTTCCTGACGGTCGCCGCGCGTTCATGTGGC
GGATGACGCAGGGCGCCGTCATGCCGCAAACTACAAACTACAGCGCGGTTCAGTCTGGCAATTGGGTGACCGGATCGGCA
ACGACTTACGGAGGCGGTGTGTCAACTTGGCAATGCACCTACACCCTGATCGGGCAGAGGAACCCGAAAGGCAGCTATAC
AGTGGTGGATTTCCGCAAGCCCAGCCTGTCTTGCGAGTGA

Upstream 100 bases:

>100_bases
AAAGCTAACGATGGTGGTCATGGGCGCTCCATGCAAAAAGCCCGCTCGAAAGCGGGCCGGATCGTGGTAACGGTGGGGTG
AGATTCGCTAGGAGGTTGAT

Downstream 100 bases:

>100_bases
TTGCGGCATCCCCCGGCCCGGTGTAGGATCGGGGGATGGTCATTTCAGATAGCATGCTCTACGGCGCACTGATCGTCATC
GTGTTTGTCATCGTAGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MQAIVLALVVAVAGCASSIMQSYVGKDITEAAMDYGPPAGVMDLPDGRRAFMWRMTQGAVMPQTTNYSAVQSGNWVTGSA
TTYGGGVSTWQCTYTLIGQRNPKGSYTVVDFRKPSLSCE

Sequences:

>Translated_119_residues
MQAIVLALVVAVAGCASSIMQSYVGKDITEAAMDYGPPAGVMDLPDGRRAFMWRMTQGAVMPQTTNYSAVQSGNWVTGSA
TTYGGGVSTWQCTYTLIGQRNPKGSYTVVDFRKPSLSCE
>Mature_119_residues
MQAIVLALVVAVAGCASSIMQSYVGKDITEAAMDYGPPAGVMDLPDGRRAFMWRMTQGAVMPQTTNYSAVQSGNWVTGSA
TTYGGGVSTWQCTYTLIGQRNPKGSYTVVDFRKPSLSCE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12685; Mature: 12685

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAIVLALVVAVAGCASSIMQSYVGKDITEAAMDYGPPAGVMDLPDGRRAFMWRMTQGAV
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCC
MPQTTNYSAVQSGNWVTGSATTYGGGVSTWQCTYTLIGQRNPKGSYTVVDFRKPSLSCE
CCCCCCCCEECCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MQAIVLALVVAVAGCASSIMQSYVGKDITEAAMDYGPPAGVMDLPDGRRAFMWRMTQGAV
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCC
MPQTTNYSAVQSGNWVTGSATTYGGGVSTWQCTYTLIGQRNPKGSYTVVDFRKPSLSCE
CCCCCCCCEECCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA