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The map label for this gene is 119386788

Identifier: 119386788

GI number: 119386788

Start: 1235995

End: 1236432

Strand: Direct

Name: 119386788

Synonym: Pden_4081

Alternate gene names: NA

Gene position: 1235995-1236432 (Clockwise)

Preceding gene: 119386786

Following gene: 119386793

Centisome position: 71.44

GC content: 69.18

Gene sequence:

>438_bases
ATGTCCGACAGCGACCTGATGCAGCTTTATTCGCGGCGCATCCTGGCGCTGGCCTCGGACATCCCGCATCTGGGCAAGCT
TGATCATGCGACGGGCAGCGCGCATCGCCGCTCGCCGCAATGCGGCTCCTCGGTCACGGCGCATGTGGCGATGCGGGACG
GCCATATCGCGGATTTCGCGCAAGAGGTGCGGGCCTGCGCCCTGGGCCAGGCCTCGGCCGGAGTGCTGGGCCGCACCGCG
CTTGGCCGCTCGCGCGACGAGATCGCAAAGGCCCGCGACGAATTGCAGGCCATGCTGAAATCGGACGGCCCCGCCCCGAC
CGCGCCTTTCGACGAACTGGAAGCTCTGCTGCCTGCCCGCGAGTTCCCCAACCGCCATGCCTCGATCCTGCTGGCTTGGG
AGGCGCTGCTGGGCGCGATCGACGCCTCGCCGACCTGA

Upstream 100 bases:

>100_bases
GGCCGTTCGCGTCATATTTCAGGCTTGCGGTGTCGAACATCGGCTTTCCTTTCGGGCTTGCCGCACCTATCTAGACCCGA
CGGCAGCAAGGGAAAAGACC

Downstream 100 bases:

>100_bases
TCGCTTCTCTGTTCTCCAAATACTCCCCCGCCGGAGGCGCCTGCCGGCGCAACCGGCACACGCGCCCGGACAAAGAAAAG
CCGGCCCAAACGGGCCGGCA

Product: NifU-related protein involved in Fe-S cluster formation

Products: NA

Alternate protein names: NifU Domain-Containing Protein; NifU-Like Protein; Nitrogen Fixation Protein; NifU-Like Protein Involved In Fe-S Cluster Formation; NifU-Related Protein Involved In Fe-S Cluster Formation; Nitrogen-Fixing NifU-Like Protein; NifU-Like Involved In Fe-S Cluster Formation; NIFU-Like Protein; NifU-Like N Terminal Domain; Nitrogen-Fixing NifU-Like; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing NifU Domain-Containing Protein; Nifu Protein; Nitrogen Fixation Protein NifU

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSDSDLMQLYSRRILALASDIPHLGKLDHATGSAHRRSPQCGSSVTAHVAMRDGHIADFAQEVRACALGQASAGVLGRTA
LGRSRDEIAKARDELQAMLKSDGPAPTAPFDELEALLPAREFPNRHASILLAWEALLGAIDASPT

Sequences:

>Translated_145_residues
MSDSDLMQLYSRRILALASDIPHLGKLDHATGSAHRRSPQCGSSVTAHVAMRDGHIADFAQEVRACALGQASAGVLGRTA
LGRSRDEIAKARDELQAMLKSDGPAPTAPFDELEALLPAREFPNRHASILLAWEALLGAIDASPT
>Mature_144_residues
SDSDLMQLYSRRILALASDIPHLGKLDHATGSAHRRSPQCGSSVTAHVAMRDGHIADFAQEVRACALGQASAGVLGRTAL
GRSRDEIAKARDELQAMLKSDGPAPTAPFDELEALLPAREFPNRHASILLAWEALLGAIDASPT

Specific function: Unknown

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15421; Mature: 15289

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSDLMQLYSRRILALASDIPHLGKLDHATGSAHRRSPQCGSSVTAHVAMRDGHIADFA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHCCCCHHHHH
QEVRACALGQASAGVLGRTALGRSRDEIAKARDELQAMLKSDGPAPTAPFDELEALLPAR
HHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
EFPNRHASILLAWEALLGAIDASPT
HCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDSDLMQLYSRRILALASDIPHLGKLDHATGSAHRRSPQCGSSVTAHVAMRDGHIADFA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHCCCCHHHHH
QEVRACALGQASAGVLGRTALGRSRDEIAKARDELQAMLKSDGPAPTAPFDELEALLPAR
HHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
EFPNRHASILLAWEALLGAIDASPT
HCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA