Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385763

Identifier: 119385763

GI number: 119385763

Start: 216885

End: 218168

Strand: Direct

Name: 119385763

Synonym: Pden_3039

Alternate gene names: NA

Gene position: 216885-218168 (Clockwise)

Preceding gene: 119385760

Following gene: 119385768

Centisome position: 12.54

GC content: 59.89

Gene sequence:

>1284_bases
ATGACGTCTTACTGGAATGGCCGACAGGCACGGCCCGACAACCTCCGGCTGTTGACCCATGAGGGTGCCTGGAAGGCGTG
GGCAGATGCTGAAGAACCGATGCCGGCGGATCCAGAGCATCGGCTTCGCGGGTGCCGCTCCATCGTGACGCAGGCACTTC
AGGACGTCTTGCACTCGACTAATGTGATCATCCTGCTCGGCTCAGGCGCATCGTTTTGTGCGCGAAATACGACAGGTCCT
AATGCTCCGGGCATGCGGGATTTATGGGTTGGGGTGCGGGCAGCTTGCGAAGCGCACCGCGCCGGTGAATTCGATGCGGT
AGTGAGGGCGCTGGTTGGAACGGCACCCGGAGTAGATCCGGACGGCAACCCGAAGACTGGCAACATCGAACGACTGCTCA
GCCTGTGCAAAATGCGCCTCGAGCTTCTGTCGGTGAAAGAGGAAACCTTGAAGAATGCGCGATCGCTGGTGGACGATCCC
GGGCCAGAGGAAGCCGCCGCCGTTGCGGAAATGGAAAGTCTCTCAGCGTTCGTGTCGCTGGCAGAGGAAGCGGTCCTAAC
CAAGGTCGGCTTCGTGAATGCGACGACGGAGCTTTCGGCGCATACGGAACTTCTTACGAAATTCGGTCGCAGGAGTGCTG
ACAAGCCCCGGGTCAAGATTTTTACGACGAACTACGACTTGTGTATCGAGGAGGCGGCACTCCGGCTCAATGCGGTTCTC
GTGGATGGATTTTCGCACAGCGCGCGGCAGCGATACAATCGAGACAACTTCGATCATGATATCGTCCGCCGGCGCAACGG
CACCGCACGCGCAGACTTCGTCGACGGTGTCTTCCAACTCTACAAACTGCATGGCTCTGTCGACTGGAGACGTGTCGGCG
ACCACGTCTTCCGCAGTTTGGATATGGATTTTGAGCACGGCGCACCCGTCCTGATCTACCCCCGGTCTACGAAATATCAG
GAGGCGTTCGATAGCCCCTATCTCGATATGTTCGCGGCATTGCAGGCCGGGTTAAGGGAGCCCGATACGACACTGATCAT
CGCGAAGACCCCGCCCCACCGGACGGCGCTGTTGCGCAAATCAGCCGATGACCGGACTTCCCCTTTCCCCGGGCACACCT
ATCCTGCAGCCACGGTCATCGGGATACCGAGTGCTGTGAAGCGGTTGAGGACCGCCGCGCGGATCTGGACCTCTGCCACC
TGGCGGTCGAAGTCTCGCGACATCAGCCGCTGGCCGAGCAGCTTCACGCAGTTCATTTTTGTTTCGACCCTGCTGCGGCG
GTGA

Upstream 100 bases:

>100_bases
CCGAAAGCTCCGGAGGACCGCAGCGTAGCCCAGGCGATAGTGGATTGCGATTGGCGGTGGGCTTTGCTGTAGTCAGGCGA
AGGCACTTCTGAGGGAAGCA

Downstream 100 bases:

>100_bases
TACCCGCTCCAGTTCCGCCAGAGCGCCCGGCCCAAGCGCTTCGATGCTCGCAGGATCTCGTTGCGCGCCCGGGCTCCGGC
TGTGTCCGGCTTCCATGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MTSYWNGRQARPDNLRLLTHEGAWKAWADAEEPMPADPEHRLRGCRSIVTQALQDVLHSTNVIILLGSGASFCARNTTGP
NAPGMRDLWVGVRAACEAHRAGEFDAVVRALVGTAPGVDPDGNPKTGNIERLLSLCKMRLELLSVKEETLKNARSLVDDP
GPEEAAAVAEMESLSAFVSLAEEAVLTKVGFVNATTELSAHTELLTKFGRRSADKPRVKIFTTNYDLCIEEAALRLNAVL
VDGFSHSARQRYNRDNFDHDIVRRRNGTARADFVDGVFQLYKLHGSVDWRRVGDHVFRSLDMDFEHGAPVLIYPRSTKYQ
EAFDSPYLDMFAALQAGLREPDTTLIIAKTPPHRTALLRKSADDRTSPFPGHTYPAATVIGIPSAVKRLRTAARIWTSAT
WRSKSRDISRWPSSFTQFIFVSTLLRR

Sequences:

>Translated_427_residues
MTSYWNGRQARPDNLRLLTHEGAWKAWADAEEPMPADPEHRLRGCRSIVTQALQDVLHSTNVIILLGSGASFCARNTTGP
NAPGMRDLWVGVRAACEAHRAGEFDAVVRALVGTAPGVDPDGNPKTGNIERLLSLCKMRLELLSVKEETLKNARSLVDDP
GPEEAAAVAEMESLSAFVSLAEEAVLTKVGFVNATTELSAHTELLTKFGRRSADKPRVKIFTTNYDLCIEEAALRLNAVL
VDGFSHSARQRYNRDNFDHDIVRRRNGTARADFVDGVFQLYKLHGSVDWRRVGDHVFRSLDMDFEHGAPVLIYPRSTKYQ
EAFDSPYLDMFAALQAGLREPDTTLIIAKTPPHRTALLRKSADDRTSPFPGHTYPAATVIGIPSAVKRLRTAARIWTSAT
WRSKSRDISRWPSSFTQFIFVSTLLRR
>Mature_426_residues
TSYWNGRQARPDNLRLLTHEGAWKAWADAEEPMPADPEHRLRGCRSIVTQALQDVLHSTNVIILLGSGASFCARNTTGPN
APGMRDLWVGVRAACEAHRAGEFDAVVRALVGTAPGVDPDGNPKTGNIERLLSLCKMRLELLSVKEETLKNARSLVDDPG
PEEAAAVAEMESLSAFVSLAEEAVLTKVGFVNATTELSAHTELLTKFGRRSADKPRVKIFTTNYDLCIEEAALRLNAVLV
DGFSHSARQRYNRDNFDHDIVRRRNGTARADFVDGVFQLYKLHGSVDWRRVGDHVFRSLDMDFEHGAPVLIYPRSTKYQE
AFDSPYLDMFAALQAGLREPDTTLIIAKTPPHRTALLRKSADDRTSPFPGHTYPAATVIGIPSAVKRLRTAARIWTSATW
RSKSRDISRWPSSFTQFIFVSTLLRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47525; Mature: 47394

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSYWNGRQARPDNLRLLTHEGAWKAWADAEEPMPADPEHRLRGCRSIVTQALQDVLHST
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
NVIILLGSGASFCARNTTGPNAPGMRDLWVGVRAACEAHRAGEFDAVVRALVGTAPGVDP
CEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
DGNPKTGNIERLLSLCKMRLELLSVKEETLKNARSLVDDPGPEEAAAVAEMESLSAFVSL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AEEAVLTKVGFVNATTELSAHTELLTKFGRRSADKPRVKIFTTNYDLCIEEAALRLNAVL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHEE
VDGFSHSARQRYNRDNFDHDIVRRRNGTARADFVDGVFQLYKLHGSVDWRRVGDHVFRSL
EECCCHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
DMDFEHGAPVLIYPRSTKYQEAFDSPYLDMFAALQAGLREPDTTLIIAKTPPHRTALLRK
CCCCCCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHC
SADDRTSPFPGHTYPAATVIGIPSAVKRLRTAARIWTSATWRSKSRDISRWPSSFTQFIF
CCCCCCCCCCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VSTLLRR
HHHHHCC
>Mature Secondary Structure 
TSYWNGRQARPDNLRLLTHEGAWKAWADAEEPMPADPEHRLRGCRSIVTQALQDVLHST
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
NVIILLGSGASFCARNTTGPNAPGMRDLWVGVRAACEAHRAGEFDAVVRALVGTAPGVDP
CEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
DGNPKTGNIERLLSLCKMRLELLSVKEETLKNARSLVDDPGPEEAAAVAEMESLSAFVSL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AEEAVLTKVGFVNATTELSAHTELLTKFGRRSADKPRVKIFTTNYDLCIEEAALRLNAVL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHEE
VDGFSHSARQRYNRDNFDHDIVRRRNGTARADFVDGVFQLYKLHGSVDWRRVGDHVFRSL
EECCCHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
DMDFEHGAPVLIYPRSTKYQEAFDSPYLDMFAALQAGLREPDTTLIIAKTPPHRTALLRK
CCCCCCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHC
SADDRTSPFPGHTYPAATVIGIPSAVKRLRTAARIWTSATWRSKSRDISRWPSSFTQFIF
CCCCCCCCCCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VSTLLRR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA