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The map label for this gene is ybaR [H]

Identifier: 119385760

GI number: 119385760

Start: 211416

End: 212906

Strand: Direct

Name: ybaR [H]

Synonym: Pden_3036

Alternate gene names: 119385760

Gene position: 211416-212906 (Clockwise)

Preceding gene: 119385758

Following gene: 119385763

Centisome position: 12.22

GC content: 65.26

Gene sequence:

>1491_bases
ATGAATTCTCTTACCTCATACCGGCACGAATGGCTGGGCAACATCCGCGCCGACCTGCTGTCGGGCTTGGTCGTCGCCCT
GGCCCTCATCCCCGAGGCCATCGCCTTCTCGATCATCGCCGGTGTCGATCCGAAGGTGGGGCTTTACGCCTCCTTCTCCA
TCGCGGTCATCACCGCCATCGCCGGCGGGCGGCCCGGCATGATTTCGGCCGCGACCGCGGCAACGGCGGTGCTGATGGTG
ACATTGGTGCGCGACCACGGGTTGCAATACCTGCTGGCCGCCACGGTGCTGGCCGGGCTGGTCCAGATCGGCATGGGGCT
GCTGCGGCTGGGCTTCGTCATGCGCTTCGTGTCGAAATCGGTGATGACCGGCTTCGTCAATGCGCTGGCGATCCTGATCT
TCATGGCGCAGCTGCCGGAACTGGATCCCGCCCGCGTGCCGCCGCTGACCTACCTGCTGGTGGCGGCGGGGCTGGCGATC
ATCTACCTGTTCCCGCTGCTGACCCGCGCCATCCCTTCGCCCCTGGTCACCATCGTCGTGCTGACGGCGCTGAGCCTGGC
CTTCGGCTGGGACGTGCGCACGGTGGGCGACATGGGCGCGCTGCCCGACACGCTGCCCGTCTTTCTGCTTCCCGACGTGC
CGCTGAATCTGGAAACGCTGACGATCATTCTGCCCTATTCGCTGGCGGTCGCCGTGGTCGGGCTGCTGGAAAGCCTAATG
ACCCAGAACCTGGTGGATGAGTTGACCGACACCAGGACCGACCGTAACCAAGAATGCATCGGCCAGGGACTGGCCAATAC
GGCCACCGGCTTCATCGGCGGCATGGCCGGCTGCGCGATGATCGGGCAGTCGATGATCAACGTCAAATCCGGCGGGCGCG
GGCGGCTGTCCTGCTTCGTCGCGGGGGTATTTCTGTTGATCCTCGTCGTGGGTCTGGGCGATCTGGTGGCGCGCATCCCG
ATGCCAGCGCTGGTGGCGGTGATGATCATGGTCTCGGTCGGCACGTTTTCCTGGTCCTCGATCGGGAACCTGCGGACGCA
TCCGCGATCATCCTCGGTGGTGATGCTGGCAACGGTGGCGACAGTGGTCTGGACCCACAACCTGGCCATCGGCGTGCTGA
TCGGTGTGCTGCTCTCGGGCATCTTCTTCGCCGCCAAGATCGCGCAGCTTTTCCGCGTCACCTCGGCCCTGTCGCTGGAC
GGGCGCAGCCGGACCTATCGCGTCGAGGGGCAGCTTTTCTACGGCTCGGTCGAGGACTTCATGGCCGCCTTCGACTTCCG
CGAGGCGCTGGAGCGGGTGGTGATCGACGTTTCCGCCGCCCATATCTGGGATATTTCCAGCGTGCAGGCACTGGACATGG
CGGTGCTGAAGTTCCGCCGCATCGGGGCCGAGGTCGAGGTCGTCGGCCTGAACGAGGCTTCCGAGACCATCCTCGACCGC
CTGGGCAGCCATGACAAACCGGGCGCGCTGGACAGGCTAAACGCACATTGA

Upstream 100 bases:

>100_bases
TGGCTCTTCCGGCCGCCGATCCGCCGGACCATTCTGAACAAACCCGATCCCACAGGCCCGCCCTTTCCCAGGCGGTCTTC
GTCCCGAGTATGGATCACGC

Downstream 100 bases:

>100_bases
CGAGGATGGAGATGAGCGATCGTATCGTCGCCTTGGTGGACGGGTCCGACTATTCCAAAGCACCTGCCGTCATTCCGGCG
AGCTGTCCAAGCCGCTGTGG

Product: sulphate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MNSLTSYRHEWLGNIRADLLSGLVVALALIPEAIAFSIIAGVDPKVGLYASFSIAVITAIAGGRPGMISAATAATAVLMV
TLVRDHGLQYLLAATVLAGLVQIGMGLLRLGFVMRFVSKSVMTGFVNALAILIFMAQLPELDPARVPPLTYLLVAAGLAI
IYLFPLLTRAIPSPLVTIVVLTALSLAFGWDVRTVGDMGALPDTLPVFLLPDVPLNLETLTIILPYSLAVAVVGLLESLM
TQNLVDELTDTRTDRNQECIGQGLANTATGFIGGMAGCAMIGQSMINVKSGGRGRLSCFVAGVFLLILVVGLGDLVARIP
MPALVAVMIMVSVGTFSWSSIGNLRTHPRSSSVVMLATVATVVWTHNLAIGVLIGVLLSGIFFAAKIAQLFRVTSALSLD
GRSRTYRVEGQLFYGSVEDFMAAFDFREALERVVIDVSAAHIWDISSVQALDMAVLKFRRIGAEVEVVGLNEASETILDR
LGSHDKPGALDRLNAH

Sequences:

>Translated_496_residues
MNSLTSYRHEWLGNIRADLLSGLVVALALIPEAIAFSIIAGVDPKVGLYASFSIAVITAIAGGRPGMISAATAATAVLMV
TLVRDHGLQYLLAATVLAGLVQIGMGLLRLGFVMRFVSKSVMTGFVNALAILIFMAQLPELDPARVPPLTYLLVAAGLAI
IYLFPLLTRAIPSPLVTIVVLTALSLAFGWDVRTVGDMGALPDTLPVFLLPDVPLNLETLTIILPYSLAVAVVGLLESLM
TQNLVDELTDTRTDRNQECIGQGLANTATGFIGGMAGCAMIGQSMINVKSGGRGRLSCFVAGVFLLILVVGLGDLVARIP
MPALVAVMIMVSVGTFSWSSIGNLRTHPRSSSVVMLATVATVVWTHNLAIGVLIGVLLSGIFFAAKIAQLFRVTSALSLD
GRSRTYRVEGQLFYGSVEDFMAAFDFREALERVVIDVSAAHIWDISSVQALDMAVLKFRRIGAEVEVVGLNEASETILDR
LGSHDKPGALDRLNAH
>Mature_496_residues
MNSLTSYRHEWLGNIRADLLSGLVVALALIPEAIAFSIIAGVDPKVGLYASFSIAVITAIAGGRPGMISAATAATAVLMV
TLVRDHGLQYLLAATVLAGLVQIGMGLLRLGFVMRFVSKSVMTGFVNALAILIFMAQLPELDPARVPPLTYLLVAAGLAI
IYLFPLLTRAIPSPLVTIVVLTALSLAFGWDVRTVGDMGALPDTLPVFLLPDVPLNLETLTIILPYSLAVAVVGLLESLM
TQNLVDELTDTRTDRNQECIGQGLANTATGFIGGMAGCAMIGQSMINVKSGGRGRLSCFVAGVFLLILVVGLGDLVARIP
MPALVAVMIMVSVGTFSWSSIGNLRTHPRSSSVVMLATVATVVWTHNLAIGVLIGVLLSGIFFAAKIAQLFRVTSALSLD
GRSRTYRVEGQLFYGSVEDFMAAFDFREALERVVIDVSAAHIWDISSVQALDMAVLKFRRIGAEVEVVGLNEASETILDR
LGSHDKPGALDRLNAH

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI4557535, Length=472, Percent_Identity=22.8813559322034, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI94721259, Length=416, Percent_Identity=24.7596153846154, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI94721255, Length=416, Percent_Identity=24.7596153846154, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI94721257, Length=416, Percent_Identity=24.7596153846154, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI94721253, Length=416, Percent_Identity=24.7596153846154, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI262206105, Length=138, Percent_Identity=34.7826086956522, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI262206075, Length=138, Percent_Identity=34.7826086956522, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI262206069, Length=138, Percent_Identity=34.7826086956522, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI262206063, Length=138, Percent_Identity=34.7826086956522, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI4505697, Length=393, Percent_Identity=22.64631043257, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI47131207, Length=510, Percent_Identity=24.9019607843137, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI20336272, Length=510, Percent_Identity=24.9019607843137, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI87081859, Length=518, Percent_Identity=27.027027027027, Blast_Score=142, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI17566848, Length=556, Percent_Identity=23.7410071942446, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI86564196, Length=503, Percent_Identity=21.272365805169, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI193203292, Length=442, Percent_Identity=21.0407239819005, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17562578, Length=391, Percent_Identity=22.2506393861893, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6325260, Length=416, Percent_Identity=22.5961538461538, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6319771, Length=381, Percent_Identity=23.8845144356955, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21355087, Length=143, Percent_Identity=31.4685314685315, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24647160, Length=143, Percent_Identity=31.4685314685315, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI19922482, Length=138, Percent_Identity=36.231884057971, Blast_Score=80, Evalue=5e-15,
Organism=Drosophila melanogaster, GI21358229, Length=140, Percent_Identity=35.7142857142857, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21358633, Length=375, Percent_Identity=23.4666666666667, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24663084, Length=125, Percent_Identity=32.8, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21357695, Length=125, Percent_Identity=32.8, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24649801, Length=121, Percent_Identity=33.8842975206612, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI85815873, Length=124, Percent_Identity=36.2903225806452, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24651449, Length=131, Percent_Identity=31.2977099236641, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 52640; Mature: 52640

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLTSYRHEWLGNIRADLLSGLVVALALIPEAIAFSIIAGVDPKVGLYASFSIAVITAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AGGRPGMISAATAATAVLMVTLVRDHGLQYLLAATVLAGLVQIGMGLLRLGFVMRFVSKS
CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMTGFVNALAILIFMAQLPELDPARVPPLTYLLVAAGLAIIYLFPLLTRAIPSPLVTIVV
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LTALSLAFGWDVRTVGDMGALPDTLPVFLLPDVPLNLETLTIILPYSLAVAVVGLLESLM
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHEEEEHHHHHHHHHHHHHHHHH
TQNLVDELTDTRTDRNQECIGQGLANTATGFIGGMAGCAMIGQSMINVKSGGRGRLSCFV
HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AGVFLLILVVGLGDLVARIPMPALVAVMIMVSVGTFSWSSIGNLRTHPRSSSVVMLATVA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCEEHHHHHH
TVVWTHNLAIGVLIGVLLSGIFFAAKIAQLFRVTSALSLDGRSRTYRVEGQLFYGSVEDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEEECCHHHH
MAAFDFREALERVVIDVSAAHIWDISSVQALDMAVLKFRRIGAEVEVVGLNEASETILDR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
LGSHDKPGALDRLNAH
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNSLTSYRHEWLGNIRADLLSGLVVALALIPEAIAFSIIAGVDPKVGLYASFSIAVITAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AGGRPGMISAATAATAVLMVTLVRDHGLQYLLAATVLAGLVQIGMGLLRLGFVMRFVSKS
CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMTGFVNALAILIFMAQLPELDPARVPPLTYLLVAAGLAIIYLFPLLTRAIPSPLVTIVV
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LTALSLAFGWDVRTVGDMGALPDTLPVFLLPDVPLNLETLTIILPYSLAVAVVGLLESLM
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHEEEEHHHHHHHHHHHHHHHHH
TQNLVDELTDTRTDRNQECIGQGLANTATGFIGGMAGCAMIGQSMINVKSGGRGRLSCFV
HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AGVFLLILVVGLGDLVARIPMPALVAVMIMVSVGTFSWSSIGNLRTHPRSSSVVMLATVA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCEEHHHHHH
TVVWTHNLAIGVLIGVLLSGIFFAAKIAQLFRVTSALSLDGRSRTYRVEGQLFYGSVEDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEEECCHHHH
MAAFDFREALERVVIDVSAAHIWDISSVQALDMAVLKFRRIGAEVEVVGLNEASETILDR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
LGSHDKPGALDRLNAH
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]