Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385768

Identifier: 119385768

GI number: 119385768

Start: 224252

End: 225097

Strand: Direct

Name: 119385768

Synonym: Pden_3046

Alternate gene names: NA

Gene position: 224252-225097 (Clockwise)

Preceding gene: 119385763

Following gene: 119385770

Centisome position: 12.96

GC content: 67.61

Gene sequence:

>846_bases
ATGAGCCAGGTGGTCAAGGGACGGGCCGCAGGCAGCCACTACAGCGCATCGGGCGGGCTGCCCTTCGTCGCTGGCATCGA
CGGTGTTGGTCGCCTTGATGACGGGCGCCGGGTCTGGTTCGTCCTGCCGCGCGATCCCTTTGGCAGCATGGCAGAGCAGA
CGGTGGTGCCAGTGGCGCAGTGCCTTGTCTTGCCGGACGATCTCGATGACCTGACGGCGGCGGCCATCGCCAACCCGGGC
ATGTCATCCTGGGTCACCTATACCGAGCGGGCGCGGCTTCAGCCTGGCGAGACCGTTCTCGTCAACGGCGCTACCGGAAC
CTCGGGCAGGCTTGCCGTCCAGATCGCCAGGCACCTGGGGGCGGGGAAGATCATCGCCACCGGCCGCGACGCCGAGGCTT
TGCGCGAGGTCGCCGCTTTGGGCGCGGACGTGACGATCCCGCTTACGGAGGATGCGGCTGCCCTCGAGGAGAGGTTCAAA
GAGCAGTTCGCGCAAGGCGTCGATGTGGTCGTCGACTACCTTTGGGGGATGAGCGCGGAATGCCTGCTGATCGCTGGGGC
CAAGACCGGACGGCCCGGCACTCCGATCCGCGTGATCCAGATCGGCTCGGTCAGCGGCGCGACCATCACCCTTCCGAGCG
CGGTTCTGCGGGCTTCCGCGATCGAACTCATGGGCGCCGGTCATGGCGCCGTCCCGCTCGACCGTCATCTTGCGGCGGTG
GAGGCGCTGCTGAAGGCGGTGGCGCCCGCGAACCTGAAAATCGCGTTCCACGCAGTCCCGCTATCAGACGGCACTCGAGC
CTGGGATCGGGACGACAGCCGCAACCGCACGGTGTTCGTGGTCTGA

Upstream 100 bases:

>100_bases
CTCTGGTTGTGCAGGACTACGGCCGGTCGCCGGCCTATACCGATTTCCCCGATCCGGCCGTAGGCCGGGCGAGGTTCGGG
TTGCCGTCAACGCCGCCGCG

Downstream 100 bases:

>100_bases
CATCCGGCTCGCTCCGGGCCTATCCTACTCGCTTCGGGTAGGCTCGGCGCTCATGCTGTCGGCGAGCATCTTCATCAGCC
GGATCAACTCGTCGAAATCG

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: Zinc-Containing Alcohol Dehydrogenase; Quinone Oxidoreductase; Zinc-Containing Alcohol Dehydrogenase Superfamily Protein; LOW QUALITY PROTEIN Quinone Oxidoreductase; NADPH2Quinone Reductase; NADPHQuinone Reductase; Dehydrogenase/Oxidoreductase; NADPHQuinone Reductase Related Zn-Dependent Oxidoreductase; Quinone Oxidoreductase Protein

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSQVVKGRAAGSHYSASGGLPFVAGIDGVGRLDDGRRVWFVLPRDPFGSMAEQTVVPVAQCLVLPDDLDDLTAAAIANPG
MSSWVTYTERARLQPGETVLVNGATGTSGRLAVQIARHLGAGKIIATGRDAEALREVAALGADVTIPLTEDAAALEERFK
EQFAQGVDVVVDYLWGMSAECLLIAGAKTGRPGTPIRVIQIGSVSGATITLPSAVLRASAIELMGAGHGAVPLDRHLAAV
EALLKAVAPANLKIAFHAVPLSDGTRAWDRDDSRNRTVFVV

Sequences:

>Translated_281_residues
MSQVVKGRAAGSHYSASGGLPFVAGIDGVGRLDDGRRVWFVLPRDPFGSMAEQTVVPVAQCLVLPDDLDDLTAAAIANPG
MSSWVTYTERARLQPGETVLVNGATGTSGRLAVQIARHLGAGKIIATGRDAEALREVAALGADVTIPLTEDAAALEERFK
EQFAQGVDVVVDYLWGMSAECLLIAGAKTGRPGTPIRVIQIGSVSGATITLPSAVLRASAIELMGAGHGAVPLDRHLAAV
EALLKAVAPANLKIAFHAVPLSDGTRAWDRDDSRNRTVFVV
>Mature_280_residues
SQVVKGRAAGSHYSASGGLPFVAGIDGVGRLDDGRRVWFVLPRDPFGSMAEQTVVPVAQCLVLPDDLDDLTAAAIANPGM
SSWVTYTERARLQPGETVLVNGATGTSGRLAVQIARHLGAGKIIATGRDAEALREVAALGADVTIPLTEDAAALEERFKE
QFAQGVDVVVDYLWGMSAECLLIAGAKTGRPGTPIRVIQIGSVSGATITLPSAVLRASAIELMGAGHGAVPLDRHLAAVE
ALLKAVAPANLKIAFHAVPLSDGTRAWDRDDSRNRTVFVV

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29321; Mature: 29190

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVVKGRAAGSHYSASGGLPFVAGIDGVGRLDDGRRVWFVLPRDPFGSMAEQTVVPVAQ
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
CLVLPDDLDDLTAAAIANPGMSSWVTYTERARLQPGETVLVNGATGTSGRLAVQIARHLG
HEECCCCHHHHHHHHHCCCCHHHHEEHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCC
AGKIIATGRDAEALREVAALGADVTIPLTEDAAALEERFKEQFAQGVDVVVDYLWGMSAE
CCEEEEECCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
CLLIAGAKTGRPGTPIRVIQIGSVSGATITLPSAVLRASAIELMGAGHGAVPLDRHLAAV
EEEEECCCCCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EALLKAVAPANLKIAFHAVPLSDGTRAWDRDDSRNRTVFVV
HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure 
SQVVKGRAAGSHYSASGGLPFVAGIDGVGRLDDGRRVWFVLPRDPFGSMAEQTVVPVAQ
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
CLVLPDDLDDLTAAAIANPGMSSWVTYTERARLQPGETVLVNGATGTSGRLAVQIARHLG
HEECCCCHHHHHHHHHCCCCHHHHEEHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCC
AGKIIATGRDAEALREVAALGADVTIPLTEDAAALEERFKEQFAQGVDVVVDYLWGMSAE
CCEEEEECCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
CLLIAGAKTGRPGTPIRVIQIGSVSGATITLPSAVLRASAIELMGAGHGAVPLDRHLAAV
EEEEECCCCCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EALLKAVAPANLKIAFHAVPLSDGTRAWDRDDSRNRTVFVV
HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA