| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119385768
Identifier: 119385768
GI number: 119385768
Start: 224252
End: 225097
Strand: Direct
Name: 119385768
Synonym: Pden_3046
Alternate gene names: NA
Gene position: 224252-225097 (Clockwise)
Preceding gene: 119385763
Following gene: 119385770
Centisome position: 12.96
GC content: 67.61
Gene sequence:
>846_bases ATGAGCCAGGTGGTCAAGGGACGGGCCGCAGGCAGCCACTACAGCGCATCGGGCGGGCTGCCCTTCGTCGCTGGCATCGA CGGTGTTGGTCGCCTTGATGACGGGCGCCGGGTCTGGTTCGTCCTGCCGCGCGATCCCTTTGGCAGCATGGCAGAGCAGA CGGTGGTGCCAGTGGCGCAGTGCCTTGTCTTGCCGGACGATCTCGATGACCTGACGGCGGCGGCCATCGCCAACCCGGGC ATGTCATCCTGGGTCACCTATACCGAGCGGGCGCGGCTTCAGCCTGGCGAGACCGTTCTCGTCAACGGCGCTACCGGAAC CTCGGGCAGGCTTGCCGTCCAGATCGCCAGGCACCTGGGGGCGGGGAAGATCATCGCCACCGGCCGCGACGCCGAGGCTT TGCGCGAGGTCGCCGCTTTGGGCGCGGACGTGACGATCCCGCTTACGGAGGATGCGGCTGCCCTCGAGGAGAGGTTCAAA GAGCAGTTCGCGCAAGGCGTCGATGTGGTCGTCGACTACCTTTGGGGGATGAGCGCGGAATGCCTGCTGATCGCTGGGGC CAAGACCGGACGGCCCGGCACTCCGATCCGCGTGATCCAGATCGGCTCGGTCAGCGGCGCGACCATCACCCTTCCGAGCG CGGTTCTGCGGGCTTCCGCGATCGAACTCATGGGCGCCGGTCATGGCGCCGTCCCGCTCGACCGTCATCTTGCGGCGGTG GAGGCGCTGCTGAAGGCGGTGGCGCCCGCGAACCTGAAAATCGCGTTCCACGCAGTCCCGCTATCAGACGGCACTCGAGC CTGGGATCGGGACGACAGCCGCAACCGCACGGTGTTCGTGGTCTGA
Upstream 100 bases:
>100_bases CTCTGGTTGTGCAGGACTACGGCCGGTCGCCGGCCTATACCGATTTCCCCGATCCGGCCGTAGGCCGGGCGAGGTTCGGG TTGCCGTCAACGCCGCCGCG
Downstream 100 bases:
>100_bases CATCCGGCTCGCTCCGGGCCTATCCTACTCGCTTCGGGTAGGCTCGGCGCTCATGCTGTCGGCGAGCATCTTCATCAGCC GGATCAACTCGTCGAAATCG
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: Zinc-Containing Alcohol Dehydrogenase; Quinone Oxidoreductase; Zinc-Containing Alcohol Dehydrogenase Superfamily Protein; LOW QUALITY PROTEIN Quinone Oxidoreductase; NADPH2Quinone Reductase; NADPHQuinone Reductase; Dehydrogenase/Oxidoreductase; NADPHQuinone Reductase Related Zn-Dependent Oxidoreductase; Quinone Oxidoreductase Protein
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSQVVKGRAAGSHYSASGGLPFVAGIDGVGRLDDGRRVWFVLPRDPFGSMAEQTVVPVAQCLVLPDDLDDLTAAAIANPG MSSWVTYTERARLQPGETVLVNGATGTSGRLAVQIARHLGAGKIIATGRDAEALREVAALGADVTIPLTEDAAALEERFK EQFAQGVDVVVDYLWGMSAECLLIAGAKTGRPGTPIRVIQIGSVSGATITLPSAVLRASAIELMGAGHGAVPLDRHLAAV EALLKAVAPANLKIAFHAVPLSDGTRAWDRDDSRNRTVFVV
Sequences:
>Translated_281_residues MSQVVKGRAAGSHYSASGGLPFVAGIDGVGRLDDGRRVWFVLPRDPFGSMAEQTVVPVAQCLVLPDDLDDLTAAAIANPG MSSWVTYTERARLQPGETVLVNGATGTSGRLAVQIARHLGAGKIIATGRDAEALREVAALGADVTIPLTEDAAALEERFK EQFAQGVDVVVDYLWGMSAECLLIAGAKTGRPGTPIRVIQIGSVSGATITLPSAVLRASAIELMGAGHGAVPLDRHLAAV EALLKAVAPANLKIAFHAVPLSDGTRAWDRDDSRNRTVFVV >Mature_280_residues SQVVKGRAAGSHYSASGGLPFVAGIDGVGRLDDGRRVWFVLPRDPFGSMAEQTVVPVAQCLVLPDDLDDLTAAAIANPGM SSWVTYTERARLQPGETVLVNGATGTSGRLAVQIARHLGAGKIIATGRDAEALREVAALGADVTIPLTEDAAALEERFKE QFAQGVDVVVDYLWGMSAECLLIAGAKTGRPGTPIRVIQIGSVSGATITLPSAVLRASAIELMGAGHGAVPLDRHLAAVE ALLKAVAPANLKIAFHAVPLSDGTRAWDRDDSRNRTVFVV
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29321; Mature: 29190
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVVKGRAAGSHYSASGGLPFVAGIDGVGRLDDGRRVWFVLPRDPFGSMAEQTVVPVAQ CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH CLVLPDDLDDLTAAAIANPGMSSWVTYTERARLQPGETVLVNGATGTSGRLAVQIARHLG HEECCCCHHHHHHHHHCCCCHHHHEEHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCC AGKIIATGRDAEALREVAALGADVTIPLTEDAAALEERFKEQFAQGVDVVVDYLWGMSAE CCEEEEECCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC CLLIAGAKTGRPGTPIRVIQIGSVSGATITLPSAVLRASAIELMGAGHGAVPLDRHLAAV EEEEECCCCCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHH EALLKAVAPANLKIAFHAVPLSDGTRAWDRDDSRNRTVFVV HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure SQVVKGRAAGSHYSASGGLPFVAGIDGVGRLDDGRRVWFVLPRDPFGSMAEQTVVPVAQ CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH CLVLPDDLDDLTAAAIANPGMSSWVTYTERARLQPGETVLVNGATGTSGRLAVQIARHLG HEECCCCHHHHHHHHHCCCCHHHHEEHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCC AGKIIATGRDAEALREVAALGADVTIPLTEDAAALEERFKEQFAQGVDVVVDYLWGMSAE CCEEEEECCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC CLLIAGAKTGRPGTPIRVIQIGSVSGATITLPSAVLRASAIELMGAGHGAVPLDRHLAAV EEEEECCCCCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHH EALLKAVAPANLKIAFHAVPLSDGTRAWDRDDSRNRTVFVV HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA