| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119358426
Identifier: 119358426
GI number: 119358426
Start: 3055606
End: 3055830
Strand: Reverse
Name: 119358426
Synonym: Cpha266_2662
Alternate gene names: NA
Gene position: 3055830-3055606 (Counterclockwise)
Preceding gene: 119358427
Following gene: 119358425
Centisome position: 97.51
GC content: 54.67
Gene sequence:
>225_bases ATGGAAAAAAACAGGCCCTGCATCATACTGGAGCAGCCGGGAACCAGATACTACTGCGCATGCGGAAAATCCGGCACCCA GCCCCACTGCGACGGATCGCACAAAGGCAGCGGTCTGCACCCATGGAAAGTTGAAATCGAAACCGAAAAAAAGGTAGCCA TCTGCACCTGCGGGATCTCCAAAAAACTCCCCTTCTGCGACGGAGCCCATAAAACGCTCGGCTGA
Upstream 100 bases:
>100_bases TTTAGGCCGACGGAGAGCTAAAGAGCCCTCGCTGAAAAAGCGGGGGCAGAGAAGAACCGGCAAAAAACCGGCAGAACAGA ACCGAAAAGGAAGGCGACCC
Downstream 100 bases:
>100_bases GTGCCGCGCGCTCATCATGGTGCATGACCAGGAACCGCATCAGAGAGCGCAAAAGCCGATAATTATTAATACTAAACGAC GAATGACGTTATGGCACGCC
Product: zinc finger CDGSH-type domain-containing protein
Products: NA
Alternate protein names: Zinc Finger CDGSH-Type Domain-Containing Protein; Iron Sulfur Domain-Containing CDGSH-Type; CDGSH-Type Iron Sulfur Domain-Containing Protein; Ferredoxin-Dependent Glutamate Synthase; Zinc Finger Cdgsh-Type Domain Protein; Conserved Region In Glutamate Synthase Family; Glutamate Synthetase; Zn-Finger CDGSH Type
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MEKNRPCIILEQPGTRYYCACGKSGTQPHCDGSHKGSGLHPWKVEIETEKKVAICTCGISKKLPFCDGAHKTLG
Sequences:
>Translated_74_residues MEKNRPCIILEQPGTRYYCACGKSGTQPHCDGSHKGSGLHPWKVEIETEKKVAICTCGISKKLPFCDGAHKTLG >Mature_74_residues MEKNRPCIILEQPGTRYYCACGKSGTQPHCDGSHKGSGLHPWKVEIETEKKVAICTCGISKKLPFCDGAHKTLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8074; Mature: 8074
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 9.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 10.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNRPCIILEQPGTRYYCACGKSGTQPHCDGSHKGSGLHPWKVEIETEKKVAICTCGIS CCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC KKLPFCDGAHKTLG CCCCCCCCCCCCCC >Mature Secondary Structure MEKNRPCIILEQPGTRYYCACGKSGTQPHCDGSHKGSGLHPWKVEIETEKKVAICTCGIS CCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC KKLPFCDGAHKTLG CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA