| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is pyrG
Identifier: 119358425
GI number: 119358425
Start: 3053818
End: 3055515
Strand: Reverse
Name: pyrG
Synonym: Cpha266_2661
Alternate gene names: 119358425
Gene position: 3055515-3053818 (Counterclockwise)
Preceding gene: 119358426
Following gene: 119358420
Centisome position: 97.5
GC content: 54.18
Gene sequence:
>1698_bases ATGGCACGCCCTAAAAATGTAAAGCATATTTTTGTTACCGGAGGGGTCATCTCCTCTCTTGGCAAAGGTATACTGTCGGC GTCGCTCGGCATGCTGCTGAAATCAAGAGGGCTCAAAGTAGCCATACAGAAATACGACCCCTATATCAACGTCGATCCCG GCACCATGTCCCCCTACCAGCACGGAGAGGTCTATGTAACCGACGACGGCGCTGAAACCGACCTTGATCTCGGCCACTAC GAGCGATTCCTCGACGAAGCCACCTCCCAGGCATCGAACCTCACTATGGGAAGAGTCTACAAATCCGTCATCGACAAAGA ACGGAGCGGCGAATATCTCGGCGGAACCGTGCAGGTCGTACCGCACGTCATCGACGAGATCAAAGACAGAATGGCCGAAC TCGCCAAAAACGGCAACCTCGACGTACTCATCACCGAAATAGGCGGAACCATCGGCGACATCGAGTCCCTTCCCTTCCTC GAAGCGATGCGGCAGATGAAGCTTGAAATGGGAGAGCGCAACCTGCTCAACATCCACCTCACCTTCGTGCCCTATATCAA GGCCGCCTGCGAGCTCAAAACCAAGCCGACGCAGCACAGCGTCAAAATGCTCCTTGAAACCGGCATACAGCCCGATATTC TCGTCTGCCGCAGCGAAAAACCGCTCTCCAGAGAGATCAAAAACAAGGTCGGCCACTTCTGCAACGTCAACGAACTCGAC GTCATCGGGCTCAACGACTGCGACACCATCTACGAAGTGCCGCTCATGCTGCTCAAGGAGAAGCTCGACCTGCGCGTCAT GAAAAAGCTCGGTCTCAAAAAATTCAGGGAACCGAACCTCGAATACTGGAGAGACTTCTGCAACAAGGTACTGCACCCCA CAGAGGGCGAAGTAACCATCGGCGTCTGCGGCAAATACACCGAATACCCCGACGCCTACAAATCCATTCTCGAAGCATTT ATCCATGCCGGCGCAAGCAACAACGTACGCGTCACCATCAAGCTGCTCCGGGCCGAAGACGCCGAAGCGGGATCGTTCGA CTTCAAAAAAGAGATGCAGGGGGTCAGCGGAGTACTTGTAGCGCCCGGATTCGGCGATCGCGGCATCGAAGGTAAAATAA GCTTCATCCGGTACGCCAGGGAGCAGAACATCCCCTTTTTCGGAATCTGTCTCGGCATGCAGTGCGCCACCATCGAGTTT GCCCGCAACGTCTGCGGCCTGCATGACGCCAACTCCACCGAATTCAACAAACGAACCCGCTTTCCCGTTATCGACCTCAT GGAACAGCAGAAAAAGGTCAAGGAAAAAGGCGGAACCATGCGGCTCGGCAGCTACCCCTGCATCATCAAAGAGGGCTCCA AAGCCTACGACATCTACAAAAAATTTCTTATCAACGAACGGCACCGCCACCGCTTCGAATTCAACAACACCTATCGTAGC GCGCTTGAAGAGCAGGGGATGGTCTTTTCCGGAACCTCGCCCAACGGCGAACTTGTCGAAATCATTGAACTCAAGGATCA CCGCTGGTTTGTAGGGGTGCAGTTCCATCCCGAACTCAAATCGAGAGTGCAGCAGGTACACCCTCTCTTTCACGGCTTCG TTGCCGCGGCAAAAGAGTACGAGAAAGGTTCCCGCCAGATGGAACTCACCGTCGACATGCCATCCTTCATGCCTGTTGAA AACGAACCGGCGCAATAA
Upstream 100 bases:
>100_bases GCTCGGCTGAGTGCCGCGCGCTCATCATGGTGCATGACCAGGAACCGCATCAGAGAGCGCAAAAGCCGATAATTATTAAT ACTAAACGACGAATGACGTT
Downstream 100 bases:
>100_bases CGCGCCGAATCCACAAAAAGCAGCCATACGGCCACGCTCACGCAGGAATCCCGACCCCCGTCGGGATTCCTCTGTTTCCG CCCATTCCAGCCTGAATTCC
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MARPKNVKHIFVTGGVISSLGKGILSASLGMLLKSRGLKVAIQKYDPYINVDPGTMSPYQHGEVYVTDDGAETDLDLGHY ERFLDEATSQASNLTMGRVYKSVIDKERSGEYLGGTVQVVPHVIDEIKDRMAELAKNGNLDVLITEIGGTIGDIESLPFL EAMRQMKLEMGERNLLNIHLTFVPYIKAACELKTKPTQHSVKMLLETGIQPDILVCRSEKPLSREIKNKVGHFCNVNELD VIGLNDCDTIYEVPLMLLKEKLDLRVMKKLGLKKFREPNLEYWRDFCNKVLHPTEGEVTIGVCGKYTEYPDAYKSILEAF IHAGASNNVRVTIKLLRAEDAEAGSFDFKKEMQGVSGVLVAPGFGDRGIEGKISFIRYAREQNIPFFGICLGMQCATIEF ARNVCGLHDANSTEFNKRTRFPVIDLMEQQKKVKEKGGTMRLGSYPCIIKEGSKAYDIYKKFLINERHRHRFEFNNTYRS ALEEQGMVFSGTSPNGELVEIIELKDHRWFVGVQFHPELKSRVQQVHPLFHGFVAAAKEYEKGSRQMELTVDMPSFMPVE NEPAQ
Sequences:
>Translated_565_residues MARPKNVKHIFVTGGVISSLGKGILSASLGMLLKSRGLKVAIQKYDPYINVDPGTMSPYQHGEVYVTDDGAETDLDLGHY ERFLDEATSQASNLTMGRVYKSVIDKERSGEYLGGTVQVVPHVIDEIKDRMAELAKNGNLDVLITEIGGTIGDIESLPFL EAMRQMKLEMGERNLLNIHLTFVPYIKAACELKTKPTQHSVKMLLETGIQPDILVCRSEKPLSREIKNKVGHFCNVNELD VIGLNDCDTIYEVPLMLLKEKLDLRVMKKLGLKKFREPNLEYWRDFCNKVLHPTEGEVTIGVCGKYTEYPDAYKSILEAF IHAGASNNVRVTIKLLRAEDAEAGSFDFKKEMQGVSGVLVAPGFGDRGIEGKISFIRYAREQNIPFFGICLGMQCATIEF ARNVCGLHDANSTEFNKRTRFPVIDLMEQQKKVKEKGGTMRLGSYPCIIKEGSKAYDIYKKFLINERHRHRFEFNNTYRS ALEEQGMVFSGTSPNGELVEIIELKDHRWFVGVQFHPELKSRVQQVHPLFHGFVAAAKEYEKGSRQMELTVDMPSFMPVE NEPAQ >Mature_564_residues ARPKNVKHIFVTGGVISSLGKGILSASLGMLLKSRGLKVAIQKYDPYINVDPGTMSPYQHGEVYVTDDGAETDLDLGHYE RFLDEATSQASNLTMGRVYKSVIDKERSGEYLGGTVQVVPHVIDEIKDRMAELAKNGNLDVLITEIGGTIGDIESLPFLE AMRQMKLEMGERNLLNIHLTFVPYIKAACELKTKPTQHSVKMLLETGIQPDILVCRSEKPLSREIKNKVGHFCNVNELDV IGLNDCDTIYEVPLMLLKEKLDLRVMKKLGLKKFREPNLEYWRDFCNKVLHPTEGEVTIGVCGKYTEYPDAYKSILEAFI HAGASNNVRVTIKLLRAEDAEAGSFDFKKEMQGVSGVLVAPGFGDRGIEGKISFIRYAREQNIPFFGICLGMQCATIEFA RNVCGLHDANSTEFNKRTRFPVIDLMEQQKKVKEKGGTMRLGSYPCIIKEGSKAYDIYKKFLINERHRHRFEFNNTYRSA LEEQGMVFSGTSPNGELVEIIELKDHRWFVGVQFHPELKSRVQQVHPLFHGFVAAAKEYEKGSRQMELTVDMPSFMPVEN EPAQ
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=549, Percent_Identity=44.2622950819672, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI28559085, Length=556, Percent_Identity=42.9856115107914, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI28559083, Length=556, Percent_Identity=42.9856115107914, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI221316689, Length=556, Percent_Identity=42.9856115107914, Blast_Score=432, Evalue=1e-121, Organism=Escherichia coli, GI1789142, Length=544, Percent_Identity=51.2867647058823, Blast_Score=540, Evalue=1e-154, Organism=Caenorhabditis elegans, GI25148299, Length=626, Percent_Identity=36.9009584664537, Blast_Score=389, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6322563, Length=565, Percent_Identity=41.4159292035398, Blast_Score=419, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6319432, Length=565, Percent_Identity=40.353982300885, Blast_Score=409, Evalue=1e-115, Organism=Drosophila melanogaster, GI24664469, Length=551, Percent_Identity=46.4609800362976, Blast_Score=458, Evalue=1e-129, Organism=Drosophila melanogaster, GI21357815, Length=495, Percent_Identity=44.2424242424242, Blast_Score=385, Evalue=1e-107,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_CHLPD (A1BJR8)
Other databases:
- EMBL: CP000492 - RefSeq: YP_913069.1 - ProteinModelPortal: A1BJR8 - SMR: A1BJR8 - STRING: A1BJR8 - GeneID: 4568765 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_2661 - NMPDR: fig|290317.7.peg.2780 - eggNOG: COG0504 - HOGENOM: HBG597806 - OMA: RVTMQKL - ProtClustDB: PRK05380 - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 63732; Mature: 63601
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 390-390 ACT_SITE 516-516 ACT_SITE 518-518
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPKNVKHIFVTGGVISSLGKGILSASLGMLLKSRGLKVAIQKYDPYINVDPGTMSPYQ CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCC HGEVYVTDDGAETDLDLGHYERFLDEATSQASNLTMGRVYKSVIDKERSGEYLGGTVQVV CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHH PHVIDEIKDRMAELAKNGNLDVLITEIGGTIGDIESLPFLEAMRQMKLEMGERNLLNIHL HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE TFVPYIKAACELKTKPTQHSVKMLLETGIQPDILVCRSEKPLSREIKNKVGHFCNVNELD EHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEE VIGLNDCDTIYEVPLMLLKEKLDLRVMKKLGLKKFREPNLEYWRDFCNKVLHPTEGEVTI EEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHCCCCCCCEEE GVCGKYTEYPDAYKSILEAFIHAGASNNVRVTIKLLRAEDAEAGSFDFKKEMQGVSGVLV EECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHCCCCEEEE APGFGDRGIEGKISFIRYAREQNIPFFGICLGMQCATIEFARNVCGLHDANSTEFNKRTR ECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCC FPVIDLMEQQKKVKEKGGTMRLGSYPCIIKEGSKAYDIYKKFLINERHRHRFEFNNTYRS CCHHHHHHHHHHHHHCCCEEEECCCCEEEECCCHHHHHHHHHHHCHHHHHCCCCCHHHHH ALEEQGMVFSGTSPNGELVEIIELKDHRWFVGVQFHPELKSRVQQVHPLFHGFVAAAKEY HHHHCCEEEECCCCCCCEEEEEEECCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH EKGSRQMELTVDMPSFMPVENEPAQ HCCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure ARPKNVKHIFVTGGVISSLGKGILSASLGMLLKSRGLKVAIQKYDPYINVDPGTMSPYQ CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCC HGEVYVTDDGAETDLDLGHYERFLDEATSQASNLTMGRVYKSVIDKERSGEYLGGTVQVV CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHH PHVIDEIKDRMAELAKNGNLDVLITEIGGTIGDIESLPFLEAMRQMKLEMGERNLLNIHL HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE TFVPYIKAACELKTKPTQHSVKMLLETGIQPDILVCRSEKPLSREIKNKVGHFCNVNELD EHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEE VIGLNDCDTIYEVPLMLLKEKLDLRVMKKLGLKKFREPNLEYWRDFCNKVLHPTEGEVTI EEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHCCCCCCCEEE GVCGKYTEYPDAYKSILEAFIHAGASNNVRVTIKLLRAEDAEAGSFDFKKEMQGVSGVLV EECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHCCCCEEEE APGFGDRGIEGKISFIRYAREQNIPFFGICLGMQCATIEFARNVCGLHDANSTEFNKRTR ECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCC FPVIDLMEQQKKVKEKGGTMRLGSYPCIIKEGSKAYDIYKKFLINERHRHRFEFNNTYRS CCHHHHHHHHHHHHHCCCEEEECCCCEEEECCCHHHHHHHHHHHCHHHHHCCCCCHHHHH ALEEQGMVFSGTSPNGELVEIIELKDHRWFVGVQFHPELKSRVQQVHPLFHGFVAAAKEY HHHHCCEEEECCCCCCCEEEEEEECCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH EKGSRQMELTVDMPSFMPVENEPAQ HCCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA