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The map label for this gene is yqgF [C]

Identifier: 119358338

GI number: 119358338

Start: 2945919

End: 2946347

Strand: Direct

Name: yqgF [C]

Synonym: Cpha266_2570

Alternate gene names: 119358338

Gene position: 2945919-2946347 (Clockwise)

Preceding gene: 119358333

Following gene: 119358339

Centisome position: 94.0

GC content: 52.21

Gene sequence:

>429_bases
ATGGGGCTAACCGAAAAAAAAAGGATTCTGGCAATTGACTACGGAACCAAACGTATTGGCCTTGCGCAAACCGATCCCCT
GCAGCTTTTCGCAAGCGCCGTCGGAACCTTCGAACGAACAACACTCTTTGCGCTCCTTGAAAAAATGGCAGCAAACAATG
AGATCGAAAAAATACTTGTAGGCTATCCGCTCAGCTCCGACAACTCGCCCAATGCCATGACCGCCGTAGTCGACCGCTTC
ATCATGGAGCTGCAACTCGCATTCCCCTCACTTCCAGTCGAAACAGCCGACGAACACCACTCCTCACGCGACGCGCACCA
GATACTGATTGCATCCGGAACGAGAAAAAAAGCCCGAAAAGAAAAAGGACGCATCGACAGCGCGGCAGCATGCGTCATCC
TGCGCGATTACCTTGAGACCCATCGGTAA

Upstream 100 bases:

>100_bases
TGAAGCGATACGGTATTTTATAAACGATAAAGCGCATATCTGCCCGTTTAAACCCTTTGAAGGGCAGCCTGACTTCCCCT
CAACCCTATCGCACGAACTC

Downstream 100 bases:

>100_bases
TAAAAAAGCGGCGCATTGAGCTGAAAGCACCCCCGCAGAGACTTTTTCTCGCAACGATTGTGGAAAACCGGTTCTTTATC
TTTAGCTTATATGACTTGTA

Product: Holliday junction resolvase YqgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MGLTEKKRILAIDYGTKRIGLAQTDPLQLFASAVGTFERTTLFALLEKMAANNEIEKILVGYPLSSDNSPNAMTAVVDRF
IMELQLAFPSLPVETADEHHSSRDAHQILIASGTRKKARKEKGRIDSAAACVILRDYLETHR

Sequences:

>Translated_142_residues
MGLTEKKRILAIDYGTKRIGLAQTDPLQLFASAVGTFERTTLFALLEKMAANNEIEKILVGYPLSSDNSPNAMTAVVDRF
IMELQLAFPSLPVETADEHHSSRDAHQILIASGTRKKARKEKGRIDSAAACVILRDYLETHR
>Mature_141_residues
GLTEKKRILAIDYGTKRIGLAQTDPLQLFASAVGTFERTTLFALLEKMAANNEIEKILVGYPLSSDNSPNAMTAVVDRFI
MELQLAFPSLPVETADEHHSSRDAHQILIASGTRKKARKEKGRIDSAAACVILRDYLETHR

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 15741; Mature: 15610

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLTEKKRILAIDYGTKRIGLAQTDPLQLFASAVGTFERTTLFALLEKMAANNEIEKILV
CCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHEEEE
GYPLSSDNSPNAMTAVVDRFIMELQLAFPSLPVETADEHHSSRDAHQILIASGTRKKARK
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHEEEEECCCHHHHHH
EKGRIDSAAACVILRDYLETHR
HHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLTEKKRILAIDYGTKRIGLAQTDPLQLFASAVGTFERTTLFALLEKMAANNEIEKILV
CCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHEEEE
GYPLSSDNSPNAMTAVVDRFIMELQLAFPSLPVETADEHHSSRDAHQILIASGTRKKARK
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHEEEEECCCHHHHHH
EKGRIDSAAACVILRDYLETHR
HHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA