| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358333
Identifier: 119358333
GI number: 119358333
Start: 2939929
End: 2940645
Strand: Direct
Name: 119358333
Synonym: Cpha266_2565
Alternate gene names: NA
Gene position: 2939929-2940645 (Clockwise)
Preceding gene: 119358332
Following gene: 119358338
Centisome position: 93.81
GC content: 57.46
Gene sequence:
>717_bases ATGCCCCTTGCTTCCCGAAGCCGAAACAAGAAAATCATGAACAAGACCAAACAAGGCGCCCGCGCCCTTTCGCAAGTGAT AACGCTGACCCTCATCCTGCTCCTCGGAGCCTGCGCCGCTCCTCCAGAAAAAGTAGTCGATATTGACGGCAACAACTACA CAGCCGTTCACGCAGGCTCCATGGTCTGGACATCCCGGAATCTCAATGTAGCCCATTTCCGGAACGGAGATCCGATCCCG GAAGTCCAGGACCCTGCCGCCTGGGCAACGCTCGCAACCCCCGCATGGTGCTACAACGAAAACAAGCCTGAAAACGGCAA ACTCTACGGAAAGCTCTATAACTGGTACGCGGTCAATGACCCCAGAGGACTGGCTCCCGAAGGATGGCATGTCGCCACCG ACGAAGAGTGGAGCGCGCTTGGCGATCTTCTTGGAGGCGAAACCGATGCGGGCGGAGCCCTCAAAGCTCTCGAACACTGG AACAATCAGACTGACAAAACGCAAACCGCGATCGGATTTGACGCGCTGCCGGCAGGAGCCCGAAGAGACACCGACGGACA CTTCATGCCCCCCGGCGAGTACAGCCGACTGTGGACGGCAACGGAAGCTTCGGAAAAAAGCGCCTGGAGCCGCTCGCTCG GCTACTTCGATGCGGCACTGCGAAAAGGAAAAGCAAGCAAAAACACCGGCTTTTCAGTCCGCTGCGTCAAGAATTGA
Upstream 100 bases:
>100_bases AGATTCCTTATTGTCTTTGCCGGTCAAACCTACCACACCTTCATGTAAGACCGGACTGGAATAAACTCATTGCCGGGAAG TAAAGGGCTCCGGGCAGGCG
Downstream 100 bases:
>100_bases CAACCCCCGTCAACAGCCAGGCGTTGACGGAGAGCCCTCACTCAACGTCGATCTGCACCTCGTTACGGCGCAAAAAAGGA ATCGTCCATGGCGGATCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MPLASRSRNKKIMNKTKQGARALSQVITLTLILLLGACAAPPEKVVDIDGNNYTAVHAGSMVWTSRNLNVAHFRNGDPIP EVQDPAAWATLATPAWCYNENKPENGKLYGKLYNWYAVNDPRGLAPEGWHVATDEEWSALGDLLGGETDAGGALKALEHW NNQTDKTQTAIGFDALPAGARRDTDGHFMPPGEYSRLWTATEASEKSAWSRSLGYFDAALRKGKASKNTGFSVRCVKN
Sequences:
>Translated_238_residues MPLASRSRNKKIMNKTKQGARALSQVITLTLILLLGACAAPPEKVVDIDGNNYTAVHAGSMVWTSRNLNVAHFRNGDPIP EVQDPAAWATLATPAWCYNENKPENGKLYGKLYNWYAVNDPRGLAPEGWHVATDEEWSALGDLLGGETDAGGALKALEHW NNQTDKTQTAIGFDALPAGARRDTDGHFMPPGEYSRLWTATEASEKSAWSRSLGYFDAALRKGKASKNTGFSVRCVKN >Mature_237_residues PLASRSRNKKIMNKTKQGARALSQVITLTLILLLGACAAPPEKVVDIDGNNYTAVHAGSMVWTSRNLNVAHFRNGDPIPE VQDPAAWATLATPAWCYNENKPENGKLYGKLYNWYAVNDPRGLAPEGWHVATDEEWSALGDLLGGETDAGGALKALEHWN NQTDKTQTAIGFDALPAGARRDTDGHFMPPGEYSRLWTATEASEKSAWSRSLGYFDAALRKGKASKNTGFSVRCVKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25960; Mature: 25829
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLASRSRNKKIMNKTKQGARALSQVITLTLILLLGACAAPPEKVVDIDGNNYTAVHAGS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCC MVWTSRNLNVAHFRNGDPIPEVQDPAAWATLATPAWCYNENKPENGKLYGKLYNWYAVND EEEECCCCCEEEECCCCCCCCCCCCCHHHHHCCCCEECCCCCCCCCEEEEEEEEEEEECC PRGLAPEGWHVATDEEWSALGDLLGGETDAGGALKALEHWNNQTDKTQTAIGFDALPAGA CCCCCCCCCEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCC RRDTDGHFMPPGEYSRLWTATEASEKSAWSRSLGYFDAALRKGKASKNTGFSVRCVKN CCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC >Mature Secondary Structure PLASRSRNKKIMNKTKQGARALSQVITLTLILLLGACAAPPEKVVDIDGNNYTAVHAGS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCC MVWTSRNLNVAHFRNGDPIPEVQDPAAWATLATPAWCYNENKPENGKLYGKLYNWYAVND EEEECCCCCEEEECCCCCCCCCCCCCHHHHHCCCCEECCCCCCCCCEEEEEEEEEEEECC PRGLAPEGWHVATDEEWSALGDLLGGETDAGGALKALEHWNNQTDKTQTAIGFDALPAGA CCCCCCCCCEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCC RRDTDGHFMPPGEYSRLWTATEASEKSAWSRSLGYFDAALRKGKASKNTGFSVRCVKN CCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA