| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is bcp [H]
Identifier: 119358320
GI number: 119358320
Start: 2928514
End: 2928963
Strand: Reverse
Name: bcp [H]
Synonym: Cpha266_2552
Alternate gene names: 119358320
Gene position: 2928963-2928514 (Counterclockwise)
Preceding gene: 119358321
Following gene: 119358317
Centisome position: 93.46
GC content: 51.78
Gene sequence:
>450_bases ATGATAGCAGAAGGAGTGAAGGCGCCGGCGTTCAGCCTGCCTGATGCCTCGGGTCGGATGATTTCGCTTTCCGATTGTAT CGGGCAGAAAGTACTCGTTATTTTTTATCCCGGTGATGATACGCCGGTCTGTACTGCTCAGTTGTGTGATTATCGCAACA ATGTTCTTGAGTTTACCCGGCGCGGCATCGCGGTGCTTGGCATCAGTGGCGACAGTGTGGAGTCTCACCGGTTGTTTGCT GAAAAGCATGAGTTGCCGTTTACTCTTTTGAGCGATAGCGACAAGCGTGTTGCAAAGGCATTCGATGCTTTGGGGTTTCT GGGTATGTCGCAGCGGGCTTATGTTCTGGTTGACGAAACAGGGGTCGTTCTTTTGGCGTACAGCGATTTTCTGCCGGTAA CCTATCAGCCGATGAAAGATCTTCTTGCCCGGATCGATGCGGCTTCCTGA
Upstream 100 bases:
>100_bases TTGGGAGTTTAAGCTGCCAGTTGATCCGCTGTTTTTTTCCGTGCAGCATTTTTCAATGAAGAGTTGTGCGGCACGGTCAC TAAAAAACCCTGAAAAAACC
Downstream 100 bases:
>100_bases TTTGTCGGTTTGCAGCGGATTTTTATCAGGGAGCGGCAGGGACTTTGCAGGTCATGACCGGCAGGGTTGCCTGTTGTGAT ATGGTCGTTGCGATGTTTCC
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MIAEGVKAPAFSLPDASGRMISLSDCIGQKVLVIFYPGDDTPVCTAQLCDYRNNVLEFTRRGIAVLGISGDSVESHRLFA EKHELPFTLLSDSDKRVAKAFDALGFLGMSQRAYVLVDETGVVLLAYSDFLPVTYQPMKDLLARIDAAS
Sequences:
>Translated_149_residues MIAEGVKAPAFSLPDASGRMISLSDCIGQKVLVIFYPGDDTPVCTAQLCDYRNNVLEFTRRGIAVLGISGDSVESHRLFA EKHELPFTLLSDSDKRVAKAFDALGFLGMSQRAYVLVDETGVVLLAYSDFLPVTYQPMKDLLARIDAAS >Mature_149_residues MIAEGVKAPAFSLPDASGRMISLSDCIGQKVLVIFYPGDDTPVCTAQLCDYRNNVLEFTRRGIAVLGISGDSVESHRLFA EKHELPFTLLSDSDKRVAKAFDALGFLGMSQRAYVLVDETGVVLLAYSDFLPVTYQPMKDLLARIDAAS
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=130, Percent_Identity=44.6153846153846, Blast_Score=104, Evalue=2e-24,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16236; Mature: 16236
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAEGVKAPAFSLPDASGRMISLSDCIGQKVLVIFYPGDDTPVCTAQLCDYRNNVLEFTR CCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH RGIAVLGISGDSVESHRLFAEKHELPFTLLSDSDKRVAKAFDALGFLGMSQRAYVLVDET CCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCC GVVLLAYSDFLPVTYQPMKDLLARIDAAS CEEEEEECCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MIAEGVKAPAFSLPDASGRMISLSDCIGQKVLVIFYPGDDTPVCTAQLCDYRNNVLEFTR CCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH RGIAVLGISGDSVESHRLFAEKHELPFTLLSDSDKRVAKAFDALGFLGMSQRAYVLVDET CCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCC GVVLLAYSDFLPVTYQPMKDLLARIDAAS CEEEEEECCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]