| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358006
Identifier: 119358006
GI number: 119358006
Start: 2554404
End: 2555717
Strand: Reverse
Name: 119358006
Synonym: Cpha266_2228
Alternate gene names: NA
Gene position: 2555717-2554404 (Counterclockwise)
Preceding gene: 119358007
Following gene: 119358005
Centisome position: 81.55
GC content: 33.33
Gene sequence:
>1314_bases ATGATAGACAACATTAAACCTAAAGAAGCTACATCAATTATCAATTCCTTAATTGGTGGCGTAGTTCCAAAAATCGGAGT TCAACACATTACCGTTGGGCGTTCGGAAGAAATAAATGCCGTTGTTGCCGCATTAGAAGATGTAAAGAATGGGCATAGTA TGGTAAAATTCTGGATTGGCGACTTCGGTTCAGGCAAATCATTTATGCTTCATTTACTCAACACGGTTGCTTTGAAGCAG AAATTTGTGGTAGCCAATGCTGACTTTACACCTGACAATCGTTTGTATTCAAATGACGGAAAAGGAGTTGCTCTCTATTC TGCCATTATGGATAATGTTTCCATTCAAACTAAGCCAGAAGGTGGTGCATTACCAACTTTGTTGGAAAAGTGGATTGAGC AAATTGTAACTAAAACTGCCGAAGAAAATAAAATTTCATTGACAGATATTCGCAATGAACAATACTTGAATCTCATTCAA AACAATATAATGAAAACTATTAATGAAATCACTGATGTAGGTGGTTTCGACTTTGGAATGGTTGTAATGAAATACTACGA AGGCTACATAAAAGATGATGAACAATTAAGAAGGAATGCTTTAAAATGGCTAAAAGGAGAATACAGAACCAAAACAGAGG CAAAACAAGACTTAGGAGTTAGAGAAGTAATTAATGATTTGAATTATTACGATATGCTAAAAAACTTCTGTAAACTCTTT GTAAGTATGGGTTACAGCGGATTTATGGTAAATCTTGACGAAGCTATAAATCTTTACAAGATTTCAACTTCTGTAATGAG GGAGAAAAATTACGAGAAAATATTAACCATTTACAACGATTGTTTCCAAGGTAAAGTAGCAAATCTGTTTTTTAATTTTG CAGGTACAAAAGAAGTTTTAGAAAACGAACGCAGAGGACTTTTTAGTTATAATGCTTTAAAGTCAAGGCTTCTTACAAAT AAATTTGAAACAGCAGAAATAAGGGATTTTGCACAGCCTGTAATTCGTTTAATGCCACTTGACCACAACGAAATATTTGT ACTGCTGAAGAAATTGAAAGCAATCTTCGACTACAATTATAAAACTGAAATTTCAATAAATGACAACGAAATTAATCAGT TTATGGAGGAGCTATTTAACAAGCCTGGTGCATCAGAATTTTTAACCCCAAGAGAAGTAATTCGAGACTTTTTGAATATT CTAAACATCATTAGACAAAATCCAGCAGTAGATAAAAACAAACTATTTGGTGAACTTGAAATTTCGGATGAAAGACCTAA TGAAGTTTCTTTAGACAGCATTGAAGAATTATAA
Upstream 100 bases:
>100_bases TTAATGAAACTTGCTACGATTTTTTAGATGATGTATTGATTGAGGAAGAAGACGATTATTACACAATAAACACAAACTAT TTTCAAAGAATTTTTGTACA
Downstream 100 bases:
>100_bases TGTCATTTGATTTACTTTCAGAACCAATACGAAAATTCATTCGTGATAAGGGTTGGGAGCAGTTGCGACCAATTCAAACA GCAGCTATTGCCAAAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MIDNIKPKEATSIINSLIGGVVPKIGVQHITVGRSEEINAVVAALEDVKNGHSMVKFWIGDFGSGKSFMLHLLNTVALKQ KFVVANADFTPDNRLYSNDGKGVALYSAIMDNVSIQTKPEGGALPTLLEKWIEQIVTKTAEENKISLTDIRNEQYLNLIQ NNIMKTINEITDVGGFDFGMVVMKYYEGYIKDDEQLRRNALKWLKGEYRTKTEAKQDLGVREVINDLNYYDMLKNFCKLF VSMGYSGFMVNLDEAINLYKISTSVMREKNYEKILTIYNDCFQGKVANLFFNFAGTKEVLENERRGLFSYNALKSRLLTN KFETAEIRDFAQPVIRLMPLDHNEIFVLLKKLKAIFDYNYKTEISINDNEINQFMEELFNKPGASEFLTPREVIRDFLNI LNIIRQNPAVDKNKLFGELEISDERPNEVSLDSIEEL
Sequences:
>Translated_437_residues MIDNIKPKEATSIINSLIGGVVPKIGVQHITVGRSEEINAVVAALEDVKNGHSMVKFWIGDFGSGKSFMLHLLNTVALKQ KFVVANADFTPDNRLYSNDGKGVALYSAIMDNVSIQTKPEGGALPTLLEKWIEQIVTKTAEENKISLTDIRNEQYLNLIQ NNIMKTINEITDVGGFDFGMVVMKYYEGYIKDDEQLRRNALKWLKGEYRTKTEAKQDLGVREVINDLNYYDMLKNFCKLF VSMGYSGFMVNLDEAINLYKISTSVMREKNYEKILTIYNDCFQGKVANLFFNFAGTKEVLENERRGLFSYNALKSRLLTN KFETAEIRDFAQPVIRLMPLDHNEIFVLLKKLKAIFDYNYKTEISINDNEINQFMEELFNKPGASEFLTPREVIRDFLNI LNIIRQNPAVDKNKLFGELEISDERPNEVSLDSIEEL >Mature_437_residues MIDNIKPKEATSIINSLIGGVVPKIGVQHITVGRSEEINAVVAALEDVKNGHSMVKFWIGDFGSGKSFMLHLLNTVALKQ KFVVANADFTPDNRLYSNDGKGVALYSAIMDNVSIQTKPEGGALPTLLEKWIEQIVTKTAEENKISLTDIRNEQYLNLIQ NNIMKTINEITDVGGFDFGMVVMKYYEGYIKDDEQLRRNALKWLKGEYRTKTEAKQDLGVREVINDLNYYDMLKNFCKLF VSMGYSGFMVNLDEAINLYKISTSVMREKNYEKILTIYNDCFQGKVANLFFNFAGTKEVLENERRGLFSYNALKSRLLTN KFETAEIRDFAQPVIRLMPLDHNEIFVLLKKLKAIFDYNYKTEISINDNEINQFMEELFNKPGASEFLTPREVIRDFLNI LNIIRQNPAVDKNKLFGELEISDERPNEVSLDSIEEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50042; Mature: 50042
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDNIKPKEATSIINSLIGGVVPKIGVQHITVGRSEEINAVVAALEDVKNGHSMVKFWIG CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCHHEEHHHHC DFGSGKSFMLHLLNTVALKQKFVVANADFTPDNRLYSNDGKGVALYSAIMDNVSIQTKPE CCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCEECCCCCCHHHHHHHHHCCCEEECCC GGALPTLLEKWIEQIVTKTAEENKISLTDIRNEQYLNLIQNNIMKTINEITDVGGFDFGM CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH VVMKYYEGYIKDDEQLRRNALKWLKGEYRTKTEAKQDLGVREVINDLNYYDMLKNFCKLF HHHHHHHHHCCCHHHHHHHHHHHHHCHHCCHHHHHHCCCHHHHHHHCCHHHHHHHHHHHH VSMGYSGFMVNLDEAINLYKISTSVMREKNYEKILTIYNDCFQGKVANLFFNFAGTKEVL HHCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHH ENERRGLFSYNALKSRLLTNKFETAEIRDFAQPVIRLMPLDHNEIFVLLKKLKAIFDYNY HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC KTEISINDNEINQFMEELFNKPGASEFLTPREVIRDFLNILNIIRQNPAVDKNKLFGELE EEEEEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCEEEEE ISDERPNEVSLDSIEEL ECCCCCCCCCHHHHHCC >Mature Secondary Structure MIDNIKPKEATSIINSLIGGVVPKIGVQHITVGRSEEINAVVAALEDVKNGHSMVKFWIG CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCHHEEHHHHC DFGSGKSFMLHLLNTVALKQKFVVANADFTPDNRLYSNDGKGVALYSAIMDNVSIQTKPE CCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCEECCCCCCHHHHHHHHHCCCEEECCC GGALPTLLEKWIEQIVTKTAEENKISLTDIRNEQYLNLIQNNIMKTINEITDVGGFDFGM CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH VVMKYYEGYIKDDEQLRRNALKWLKGEYRTKTEAKQDLGVREVINDLNYYDMLKNFCKLF HHHHHHHHHCCCHHHHHHHHHHHHHCHHCCHHHHHHCCCHHHHHHHCCHHHHHHHHHHHH VSMGYSGFMVNLDEAINLYKISTSVMREKNYEKILTIYNDCFQGKVANLFFNFAGTKEVL HHCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHH ENERRGLFSYNALKSRLLTNKFETAEIRDFAQPVIRLMPLDHNEIFVLLKKLKAIFDYNY HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC KTEISINDNEINQFMEELFNKPGASEFLTPREVIRDFLNILNIIRQNPAVDKNKLFGELE EEEEEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCEEEEE ISDERPNEVSLDSIEEL ECCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA