| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358007
Identifier: 119358007
GI number: 119358007
Start: 2555714
End: 2557687
Strand: Reverse
Name: 119358007
Synonym: Cpha266_2229
Alternate gene names: NA
Gene position: 2557687-2555714 (Counterclockwise)
Preceding gene: 119358008
Following gene: 119358006
Centisome position: 81.61
GC content: 30.6
Gene sequence:
>1974_bases ATGACAGCAATAATAATAATCGGAATAATAATTTTTATAATCTATGCCGCATCGAGCAAGAAAAGACCGACCCAAAAAAA TACGACCTATACAAATAACAAACAACAATCTGAAAAGGAAATTCGAGATGAATTAGTGCAAAACCTTATTAAAAACATCA AAGTTACAGTGACGACCTCAAGCTCAGCAAGCAACTACAATGACGATTCAATTATTGATGTCACAGACCAATCCTATAGA ATAAACTCAAATAGTAATTTAAAAAAATACCGTAGTGGTGTGCCCTACTGGGCGCATCACTATGTTTATTCTTATTCAGA AATCAATAGTGCATCAAGTGAACAAAAGAAGTTTTATGCTATTTTCAAAAACAGCTTTTTAAATAGAGAGTATTTTGATT TAGAAGGAAACACGAATTATGCTTTCATTCTATTATTTGACTTGCTTATTGAATTTGATAATCATAAAAACATATCTAAA CTTGAAAGCCAACTTAAAATTTTAGGACAATGCTATCCTAAAACAAAATCCTATGGTGTATCATTTCTAATTCAAAAAAT GGAGGTAAATGGCGACAGCGATGGCGTTTCAAGACTTAGAGCAGAAGATAGATACGGTTATCAAAACTACAATACAGATT ACGATTATTGGAGATTAGGGAGTAAATACAAAACCAAACTAAAACTAAATGACGAAGAAGTTAAACTCCTAAACAAATTA TGGTATCCGAGTAATAACTTTTGCAGTGTTGAATATTGTTGTGTTGAAATTTTAAAACTCTATATTACTGTCATTGATGA GTTAAAAGCCAGTTACATTGCGGAAGGAACAACAGTAGATGCTCAATTCTTAGCGGTTGCAGATGTAATTGCACGAAAAC ATTTTAAATACAAGAATGGAAGTCAGAATTACAAGTATTCCATTGAAACAACAACAAATGAATTTTACTCTCATATTTTC AAACATTGTGAGAATGCCGTTCGTGAATATTACGGACATAAGAGAAAAATAAACACTGACACCTATTACACTACAGCAGA AGCCAAAACAGAATTTGAAACTAAAATAATCTCAAAAATATCGGGCTTACTCCCTGTACTAATTTCTAAAGTTTCACTAC CAGACGAAGCTACAGACATTGAATTGTATTCACAAAATACAAATCGGTGGAAAATAAAGTTCGAGGAGTTAACAACACGC TATAATGAAAAGCCTAAAGAGTTTATTGATTCGATTGTCGCCCTTGGTAAACTAAATAAAAAGAATCCATCAATTGAAAA TATTTTTTTTGAAGCATCAAAATTTATTGCAAAATATGATAAGGAATCAGCTCTTTCACTTTATGTTCATTACTTATTTT ACGATTTAAAATCGGCCACTTTCCATAATAAACAACTCACAAAGACTATTCAGAAAAGTTTATTTAAAACTAATGAACAG TTGCACGATTTTGAAATAATTGTTAGCGATTTAATCAAAGACAAAGATTTAGAAAAAGCATTAAAAAATGTTTCCAAAGT TTATGAGGTAAAGCGAAAGAAAATACAACTTGATACAACTTTAATAAAAAAAGTTCAGCAACAACACTCTGGAACTGTTG AGCTGCTTAATGAATATTTAAAAGACGATTTTGAGAATGAGAACAATTCTATTAAGTCACAAGAAATAAACAATGAAGAA ATTAAAATCGAAATTACGCAGAAAAGTGAAGCGACCTCTCATTCTGCATTTGTTAGCGACTTGACATTCTCGCCAATACA CATATCCACTTTGGAGCTTTTCTCAAAGAGTAATTTTTCAATTCTACAAAGCGAACTTGAAATATTTGCAAAATCAAAAG GCATCTTTAAAAATCAATTAATCGAAAGCATTAATGAAACTTGCTACGATTTTTTAGATGATGTATTGATTGAGGAAGAA GACGATTATTACACAATAAACACAAACTATTTTCAAAGAATTTTTGTACAATGA
Upstream 100 bases:
>100_bases ACACGCTGTTGCACCACATTTGCTTATGCCCCAACGCACCAGCAAAACGACAAATGACTGTAAATTTTAATACTTTTGAG AACTAACATTTTGACGCCTA
Downstream 100 bases:
>100_bases TAGACAACATTAAACCTAAAGAAGCTACATCAATTATCAATTCCTTAATTGGTGGCGTAGTTCCAAAAATCGGAGTTCAA CACATTACCGTTGGGCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MTAIIIIGIIIFIIYAASSKKRPTQKNTTYTNNKQQSEKEIRDELVQNLIKNIKVTVTTSSSASNYNDDSIIDVTDQSYR INSNSNLKKYRSGVPYWAHHYVYSYSEINSASSEQKKFYAIFKNSFLNREYFDLEGNTNYAFILLFDLLIEFDNHKNISK LESQLKILGQCYPKTKSYGVSFLIQKMEVNGDSDGVSRLRAEDRYGYQNYNTDYDYWRLGSKYKTKLKLNDEEVKLLNKL WYPSNNFCSVEYCCVEILKLYITVIDELKASYIAEGTTVDAQFLAVADVIARKHFKYKNGSQNYKYSIETTTNEFYSHIF KHCENAVREYYGHKRKINTDTYYTTAEAKTEFETKIISKISGLLPVLISKVSLPDEATDIELYSQNTNRWKIKFEELTTR YNEKPKEFIDSIVALGKLNKKNPSIENIFFEASKFIAKYDKESALSLYVHYLFYDLKSATFHNKQLTKTIQKSLFKTNEQ LHDFEIIVSDLIKDKDLEKALKNVSKVYEVKRKKIQLDTTLIKKVQQQHSGTVELLNEYLKDDFENENNSIKSQEINNEE IKIEITQKSEATSHSAFVSDLTFSPIHISTLELFSKSNFSILQSELEIFAKSKGIFKNQLIESINETCYDFLDDVLIEEE DDYYTINTNYFQRIFVQ
Sequences:
>Translated_657_residues MTAIIIIGIIIFIIYAASSKKRPTQKNTTYTNNKQQSEKEIRDELVQNLIKNIKVTVTTSSSASNYNDDSIIDVTDQSYR INSNSNLKKYRSGVPYWAHHYVYSYSEINSASSEQKKFYAIFKNSFLNREYFDLEGNTNYAFILLFDLLIEFDNHKNISK LESQLKILGQCYPKTKSYGVSFLIQKMEVNGDSDGVSRLRAEDRYGYQNYNTDYDYWRLGSKYKTKLKLNDEEVKLLNKL WYPSNNFCSVEYCCVEILKLYITVIDELKASYIAEGTTVDAQFLAVADVIARKHFKYKNGSQNYKYSIETTTNEFYSHIF KHCENAVREYYGHKRKINTDTYYTTAEAKTEFETKIISKISGLLPVLISKVSLPDEATDIELYSQNTNRWKIKFEELTTR YNEKPKEFIDSIVALGKLNKKNPSIENIFFEASKFIAKYDKESALSLYVHYLFYDLKSATFHNKQLTKTIQKSLFKTNEQ LHDFEIIVSDLIKDKDLEKALKNVSKVYEVKRKKIQLDTTLIKKVQQQHSGTVELLNEYLKDDFENENNSIKSQEINNEE IKIEITQKSEATSHSAFVSDLTFSPIHISTLELFSKSNFSILQSELEIFAKSKGIFKNQLIESINETCYDFLDDVLIEEE DDYYTINTNYFQRIFVQ >Mature_656_residues TAIIIIGIIIFIIYAASSKKRPTQKNTTYTNNKQQSEKEIRDELVQNLIKNIKVTVTTSSSASNYNDDSIIDVTDQSYRI NSNSNLKKYRSGVPYWAHHYVYSYSEINSASSEQKKFYAIFKNSFLNREYFDLEGNTNYAFILLFDLLIEFDNHKNISKL ESQLKILGQCYPKTKSYGVSFLIQKMEVNGDSDGVSRLRAEDRYGYQNYNTDYDYWRLGSKYKTKLKLNDEEVKLLNKLW YPSNNFCSVEYCCVEILKLYITVIDELKASYIAEGTTVDAQFLAVADVIARKHFKYKNGSQNYKYSIETTTNEFYSHIFK HCENAVREYYGHKRKINTDTYYTTAEAKTEFETKIISKISGLLPVLISKVSLPDEATDIELYSQNTNRWKIKFEELTTRY NEKPKEFIDSIVALGKLNKKNPSIENIFFEASKFIAKYDKESALSLYVHYLFYDLKSATFHNKQLTKTIQKSLFKTNEQL HDFEIIVSDLIKDKDLEKALKNVSKVYEVKRKKIQLDTTLIKKVQQQHSGTVELLNEYLKDDFENENNSIKSQEINNEEI KIEITQKSEATSHSAFVSDLTFSPIHISTLELFSKSNFSILQSELEIFAKSKGIFKNQLIESINETCYDFLDDVLIEEED DYYTINTNYFQRIFVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76683; Mature: 76552
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIIIIGIIIFIIYAASSKKRPTQKNTTYTNNKQQSEKEIRDELVQNLIKNIKVTVTTS CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEC SSASNYNDDSIIDVTDQSYRINSNSNLKKYRSGVPYWAHHYVYSYSEINSASSEQKKFYA CCCCCCCCCCEEEECCCCEEECCCCCHHHHHCCCCHHHHHHEEEHHHHCCCCHHHHHHHH IFKNSFLNREYFDLEGNTNYAFILLFDLLIEFDNHKNISKLESQLKILGQCYPKTKSYGV HHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCCH SFLIQKMEVNGDSDGVSRLRAEDRYGYQNYNTDYDYWRLGSKYKTKLKLNDEEVKLLNKL HHHEEHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEEEECHHHHHHHHHH WYPSNNFCSVEYCCVEILKLYITVIDELKASYIAEGTTVDAQFLAVADVIARKHFKYKNG CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC SQNYKYSIETTTNEFYSHIFKHCENAVREYYGHKRKINTDTYYTTAEAKTEFETKIISKI CCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHH SGLLPVLISKVSLPDEATDIELYSQNTNRWKIKFEELTTRYNEKPKEFIDSIVALGKLNK HHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHCCCC KNPSIENIFFEASKFIAKYDKESALSLYVHYLFYDLKSATFHNKQLTKTIQKSLFKTNEQ CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH LHDFEIIVSDLIKDKDLEKALKNVSKVYEVKRKKIQLDTTLIKKVQQQHSGTVELLNEYL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KDDFENENNSIKSQEINNEEIKIEITQKSEATSHSAFVSDLTFSPIHISTLELFSKSNFS HHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEHHHHHHHCCCCHH ILQSELEIFAKSKGIFKNQLIESINETCYDFLDDVLIEEEDDYYTINTNYFQRIFVQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHEECC >Mature Secondary Structure TAIIIIGIIIFIIYAASSKKRPTQKNTTYTNNKQQSEKEIRDELVQNLIKNIKVTVTTS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEC SSASNYNDDSIIDVTDQSYRINSNSNLKKYRSGVPYWAHHYVYSYSEINSASSEQKKFYA CCCCCCCCCCEEEECCCCEEECCCCCHHHHHCCCCHHHHHHEEEHHHHCCCCHHHHHHHH IFKNSFLNREYFDLEGNTNYAFILLFDLLIEFDNHKNISKLESQLKILGQCYPKTKSYGV HHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCCH SFLIQKMEVNGDSDGVSRLRAEDRYGYQNYNTDYDYWRLGSKYKTKLKLNDEEVKLLNKL HHHEEHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEEEECHHHHHHHHHH WYPSNNFCSVEYCCVEILKLYITVIDELKASYIAEGTTVDAQFLAVADVIARKHFKYKNG CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC SQNYKYSIETTTNEFYSHIFKHCENAVREYYGHKRKINTDTYYTTAEAKTEFETKIISKI CCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHH SGLLPVLISKVSLPDEATDIELYSQNTNRWKIKFEELTTRYNEKPKEFIDSIVALGKLNK HHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHCCCC KNPSIENIFFEASKFIAKYDKESALSLYVHYLFYDLKSATFHNKQLTKTIQKSLFKTNEQ CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH LHDFEIIVSDLIKDKDLEKALKNVSKVYEVKRKKIQLDTTLIKKVQQQHSGTVELLNEYL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KDDFENENNSIKSQEINNEEIKIEITQKSEATSHSAFVSDLTFSPIHISTLELFSKSNFS HHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEHHHHHHHCCCCHH ILQSELEIFAKSKGIFKNQLIESINETCYDFLDDVLIEEEDDYYTINTNYFQRIFVQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA