| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357869
Identifier: 119357869
GI number: 119357869
Start: 2412040
End: 2412405
Strand: Reverse
Name: 119357869
Synonym: Cpha266_2077
Alternate gene names: NA
Gene position: 2412405-2412040 (Counterclockwise)
Preceding gene: 119357871
Following gene: 119357868
Centisome position: 76.98
GC content: 53.83
Gene sequence:
>366_bases GTGAGCGGCGGACGAAGTCCGGGGCATGTCGTGATGAGGATTTCGATTCCTTCATATCGGGGGCAACGACACAATCCCAT CGCGAAACGAACAAAGAGAGGCGCTTTGTGTATAGATAATGAAAATCCGCATAACATTCCTTGTTCTCAGGCAAGGGCAG CGCCCTTTTCCCGTTGTGAGCGCTTTGAGCAGCTTGCAGGGGGAGTCGCTGCTGGTTGGGGAGATCGGCGGCGGAACAAC CAGACAGCCGGTTTTCTCTCCAGGCCGAAAGAGAAGCGGGCGACGACCCGGAGCGCTCGCTTCCGGCTTGAGGTTGTTTT ACAGGCGGAAGTGTTATATTTGTTTTTTGCTATTAAAGAGAGGTGA
Upstream 100 bases:
>100_bases CGGGTCAGTTCGCTGACCGAAAGAATCGCTGTGCTCATAGGAGAGAAAAAACCTCGGTAAAAAAGAAAAGAGATACGTTC GGGCATCTCTTTTTATTGTC
Downstream 100 bases:
>100_bases CCGAATGAGTCGATGCTATGACAGAGCATAATCTGACAGAGGAGCTTGCCGCTCTTCTTGACATAGAGCGGGCGGAGGCA GGTCGTCTTCTGAACGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSGGRSPGHVVMRISIPSYRGQRHNPIAKRTKRGALCIDNENPHNIPCSQARAAPFSRCERFEQLAGGVAAGWGDRRRNN QTAGFLSRPKEKRATTRSARFRLEVVLQAEVLYLFFAIKER
Sequences:
>Translated_121_residues MSGGRSPGHVVMRISIPSYRGQRHNPIAKRTKRGALCIDNENPHNIPCSQARAAPFSRCERFEQLAGGVAAGWGDRRRNN QTAGFLSRPKEKRATTRSARFRLEVVLQAEVLYLFFAIKER >Mature_120_residues SGGRSPGHVVMRISIPSYRGQRHNPIAKRTKRGALCIDNENPHNIPCSQARAAPFSRCERFEQLAGGVAAGWGDRRRNNQ TAGFLSRPKEKRATTRSARFRLEVVLQAEVLYLFFAIKER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13650; Mature: 13519
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGRSPGHVVMRISIPSYRGQRHNPIAKRTKRGALCIDNENPHNIPCSQARAAPFSRCE CCCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHH RFEQLAGGVAAGWGDRRRNNQTAGFLSRPKEKRATTRSARFRLEVVLQAEVLYLFFAIKE HHHHHHCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEHHHHHHHHHHHHCC R C >Mature Secondary Structure SGGRSPGHVVMRISIPSYRGQRHNPIAKRTKRGALCIDNENPHNIPCSQARAAPFSRCE CCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHH RFEQLAGGVAAGWGDRRRNNQTAGFLSRPKEKRATTRSARFRLEVVLQAEVLYLFFAIKE HHHHHHCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEHHHHHHHHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA