| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357868
Identifier: 119357868
GI number: 119357868
Start: 2410970
End: 2412022
Strand: Reverse
Name: 119357868
Synonym: Cpha266_2076
Alternate gene names: NA
Gene position: 2412022-2410970 (Counterclockwise)
Preceding gene: 119357869
Following gene: 119357867
Centisome position: 76.97
GC content: 54.99
Gene sequence:
>1053_bases ATGACAGAGCATAATCTGACAGAGGAGCTTGCCGCTCTTCTTGACATAGAGCGGGCGGAGGCAGGTCGTCTTCTGAACGG TTTATCCGGCGCGATGTCGGCTGAACTGCTGCAGGAGGGCAAGCTTCAACTATCGGGGCTTGGCCTGTTCACGGTGCATC ATGAACCGGCAACGCGACAGATGCATGGCGAGGAGGCCATCTATTGCCCTCCTCGCAACAGGGTGGTATTTCTTCCGGAC CTTTCGGCAAATACCGGCACCTTACGGATCGCATCGCAGAGAATGAAGCTCGGCAAGAGTGATGCGGAGCGGTTCAGCCG GGCGCTTGACTCCCTTTTTGCCTCTTCGATGGCATCGGGCCGGCAAATCGAGCTGCAGGGGTTTGGGATGCTCTCGAAAT CCGAAGGCTCAAGCTATACGTTTCATGCGGCAACAGGTCTTGACGAGCTTTTAAACAGTGAGTATCAGGGGCTTCGGGAA ATTTTCCTTTCACCGGACAAACCACCGGCAACCGACGAGAAAAACAGCGCGATTGAGCAAGCTGCAAAACGGGCGAACAC GTTGCGCGTTACCCTGTTGGCCCTGATGGCAGTGAGCGGGTTGCTTGCTGTCGTTATGCTGATGCCGGCAATCCGTAACA GCTCTTTTTTCGTCCCGGCGCCAGCACCCGTTTCGCTCTCCCTGCCCGTCAGACAGCCAGTCGCGCTTTCGTCGGCTGAC GCTTTCCGCAACGAAGGAGCTTCGGGCGATTCACTTGCACAGGATAAGGTTGTTGTTCTCGAAAAAGGGGAGTTTACCAT TGTCCTCGCAACGTTCAGAACGGCGAAGGTGGCCCTGAGAGAGTCGGCAAAACTGAAGGAGAGCGGGATAGATGCCTTTG TCTGGCCGGTATCCGACAAGGGAAAAAAATATTACAGGCTTGCTCTCGGACGATACGGGAGCGGGAACGAGGCAAAAGCC GGAATGAAATCGCTCGCTCAAGGCCTTGCCCGGGATGCCGCTTTGCAGGAAATAACAAAAAGGTATGAACTTCATGGAGA AACAGGATTGTAA
Upstream 100 bases:
>100_bases CGACCCGGAGCGCTCGCTTCCGGCTTGAGGTTGTTTTACAGGCGGAAGTGTTATATTTGTTTTTTGCTATTAAAGAGAGG TGACCGAATGAGTCGATGCT
Downstream 100 bases:
>100_bases AAATCTTCATCCGCAGTCGATGTGTCCCGCATTCGGCGGGCTGCGGGTTCTGACAAGAATTGACGGCGTGCAGGTCTGTC TTGTAGCCGATCAGGGGTGC
Product: sporulation domain-containing protein
Products: NA
Alternate protein names: Sporulation Domain Protein
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTEHNLTEELAALLDIERAEAGRLLNGLSGAMSAELLQEGKLQLSGLGLFTVHHEPATRQMHGEEAIYCPPRNRVVFLPD LSANTGTLRIASQRMKLGKSDAERFSRALDSLFASSMASGRQIELQGFGMLSKSEGSSYTFHAATGLDELLNSEYQGLRE IFLSPDKPPATDEKNSAIEQAAKRANTLRVTLLALMAVSGLLAVVMLMPAIRNSSFFVPAPAPVSLSLPVRQPVALSSAD AFRNEGASGDSLAQDKVVVLEKGEFTIVLATFRTAKVALRESAKLKESGIDAFVWPVSDKGKKYYRLALGRYGSGNEAKA GMKSLAQGLARDAALQEITKRYELHGETGL
Sequences:
>Translated_350_residues MTEHNLTEELAALLDIERAEAGRLLNGLSGAMSAELLQEGKLQLSGLGLFTVHHEPATRQMHGEEAIYCPPRNRVVFLPD LSANTGTLRIASQRMKLGKSDAERFSRALDSLFASSMASGRQIELQGFGMLSKSEGSSYTFHAATGLDELLNSEYQGLRE IFLSPDKPPATDEKNSAIEQAAKRANTLRVTLLALMAVSGLLAVVMLMPAIRNSSFFVPAPAPVSLSLPVRQPVALSSAD AFRNEGASGDSLAQDKVVVLEKGEFTIVLATFRTAKVALRESAKLKESGIDAFVWPVSDKGKKYYRLALGRYGSGNEAKA GMKSLAQGLARDAALQEITKRYELHGETGL >Mature_349_residues TEHNLTEELAALLDIERAEAGRLLNGLSGAMSAELLQEGKLQLSGLGLFTVHHEPATRQMHGEEAIYCPPRNRVVFLPDL SANTGTLRIASQRMKLGKSDAERFSRALDSLFASSMASGRQIELQGFGMLSKSEGSSYTFHAATGLDELLNSEYQGLREI FLSPDKPPATDEKNSAIEQAAKRANTLRVTLLALMAVSGLLAVVMLMPAIRNSSFFVPAPAPVSLSLPVRQPVALSSADA FRNEGASGDSLAQDKVVVLEKGEFTIVLATFRTAKVALRESAKLKESGIDAFVWPVSDKGKKYYRLALGRYGSGNEAKAG MKSLAQGLARDAALQEITKRYELHGETGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37739; Mature: 37607
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEHNLTEELAALLDIERAEAGRLLNGLSGAMSAELLQEGKLQLSGLGLFTVHHEPATRQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHH MHGEEAIYCPPRNRVVFLPDLSANTGTLRIASQRMKLGKSDAERFSRALDSLFASSMASG CCCCCEEEECCCCCEEEEECCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCC RQIELQGFGMLSKSEGSSYTFHAATGLDELLNSEYQGLREIFLSPDKPPATDEKNSAIEQ CEEEEEECCEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH AAKRANTLRVTLLALMAVSGLLAVVMLMPAIRNSSFFVPAPAPVSLSLPVRQPVALSSAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCCCCCHH AFRNEGASGDSLAQDKVVVLEKGEFTIVLATFRTAKVALRESAKLKESGIDAFVWPVSDK HHHCCCCCCCCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCC GKKYYRLALGRYGSGNEAKAGMKSLAQGLARDAALQEITKRYELHGETGL CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TEHNLTEELAALLDIERAEAGRLLNGLSGAMSAELLQEGKLQLSGLGLFTVHHEPATRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHH MHGEEAIYCPPRNRVVFLPDLSANTGTLRIASQRMKLGKSDAERFSRALDSLFASSMASG CCCCCEEEECCCCCEEEEECCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCC RQIELQGFGMLSKSEGSSYTFHAATGLDELLNSEYQGLREIFLSPDKPPATDEKNSAIEQ CEEEEEECCEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH AAKRANTLRVTLLALMAVSGLLAVVMLMPAIRNSSFFVPAPAPVSLSLPVRQPVALSSAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCCCCCHH AFRNEGASGDSLAQDKVVVLEKGEFTIVLATFRTAKVALRESAKLKESGIDAFVWPVSDK HHHCCCCCCCCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCC GKKYYRLALGRYGSGNEAKAGMKSLAQGLARDAALQEITKRYELHGETGL CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA