| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357830
Identifier: 119357830
GI number: 119357830
Start: 2357333
End: 2358589
Strand: Reverse
Name: 119357830
Synonym: Cpha266_2038
Alternate gene names: NA
Gene position: 2358589-2357333 (Counterclockwise)
Preceding gene: 119357831
Following gene: 119357829
Centisome position: 75.26
GC content: 48.93
Gene sequence:
>1257_bases ATGCAGATCATTATTTTTGAAGATGAACGGGTCTCTTTTCTGAAACCGCTCGCCAATCTTAAGCCCGTTTACGGACTGGT TTCTGGTTTTTTGTCGCTTGATGAAAAATTTCAGCATTATATCGGCGCCGCTCATCCGCTCTCTTATCATCTTCGTCGCT ATCTTGCTCCTTTTTTCAGCGAGCAGCACCCTGACAGGCTTGTCAATTCGATTGAAGATGATGATGTGTTGTTTGTGAAC GGGAGGCTGATTTGTGACAAGCGTGTTGCGCAGATTGTCGCAACCGGTGGCGTGGATTCCGGGCACGCTTTAGTGCAGGG GGATGATCTTGTTTTGGCAAGGGTTCGTCGCGATCGGCTTCGGCTTGATCAGGATGAGATGCTGACCGATCTTATTGATA CAGCGGAGCTCTCTTCGGGGCTTGTTGTCGATAAGGTATCGGGTTTCAGGATGATCCGCTATGTCTGGGATGCGATTGGC TTTCATGCTGCCGAGTTGAAAAACGATAGCGAAACGCTGGAGCTTGGTTGTATTGAGGGCAATGTTCATCCTTCTGCGGT GATGGTGAATCGTTCGAATGTTTATATCGGCGCTGATGCTGTGGTGAAGGCCGGAGCGGTGATTGACGCGACGGAGGGGT TTGTTGCCGTTGGTTGCGGGGCTGTTGTCGAACCGCAGGCCGTGTTGATGAACAGCGTTTATCTGGCGCCCTGGTCAAAG GCGAATATCGGAGCAAAGATTTACAGCAATGTGGCTGTTGGTCTTGCTTCGAAGGTCGGGGGCGAGGTTGAGGATTCGAT TATTGAGCCTTTTGCAAATAAGCAGCATGATGGTTTTCTCGGTCACTCCTATCTTTCATCCTGGTGTAATCTTGGGGCAG GCACGAATACTTCGGATCTGAAAAACAATTACAGCAAGATCGTTCTTGATATGGGCAGCCATAAAGTTCTTACCGATCTG CAGTTTCTTGGTCTGATTATGGGAGACCATTCGAAAAGTTCAATCAATTCGATGTTCAATACGGGAACCATTGTCGGCAC CAGCGCCAATGTTTTTGGCGAGGGGTTTCCTCCTAAATATATTCCCTCTTTTTCGTGGGCAGGAAGTGCCGCAGGTATTG AGCCTTACGAGCTTGACAAGGCTGTAGGGACTGCACGAAAAGTAATGGAGCGAAGAAGGGTTTCCATGAGCCTTTCGTAT GAGGCTATGTTCCGTTTTCTTGCCTTGCGGGAGCAGGGTGGAGAGGTTTTTATCTAA
Upstream 100 bases:
>100_bases GGGAGGTTTTTGAGGGCGTTCAGGGCTCTGTTCGCGTAGCAGTGCGTCCTCTTGCGCTCAAGGTTCTTATGGATGCTTCA GGGCTTAATGTGGAATAAAC
Downstream 100 bases:
>100_bases CTCATTAGCCGGTTTTCTGCATGATTCTTGTTATTGATAATTATGATTCGTTTACCTATAACCTGGTACAGTATATCGGC GAGTCCGGAGTGGATGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Sugar Phosphate Nucleotydyl Transferase; Sugar Phospate Transferase; Transferase Hexapeptide Repeat Containing Protein; Transferase Hexapeptide Repeat; Nucleotidyl Transferase; UDP-GlcNAc Pyrophosphorylase; Sugar-1-Phosphate Guanyl Transferase; Hexapeptide Transferase Family Protein; Hexapeptide Repeat-Containing Protein
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MQIIIFEDERVSFLKPLANLKPVYGLVSGFLSLDEKFQHYIGAAHPLSYHLRRYLAPFFSEQHPDRLVNSIEDDDVLFVN GRLICDKRVAQIVATGGVDSGHALVQGDDLVLARVRRDRLRLDQDEMLTDLIDTAELSSGLVVDKVSGFRMIRYVWDAIG FHAAELKNDSETLELGCIEGNVHPSAVMVNRSNVYIGADAVVKAGAVIDATEGFVAVGCGAVVEPQAVLMNSVYLAPWSK ANIGAKIYSNVAVGLASKVGGEVEDSIIEPFANKQHDGFLGHSYLSSWCNLGAGTNTSDLKNNYSKIVLDMGSHKVLTDL QFLGLIMGDHSKSSINSMFNTGTIVGTSANVFGEGFPPKYIPSFSWAGSAAGIEPYELDKAVGTARKVMERRRVSMSLSY EAMFRFLALREQGGEVFI
Sequences:
>Translated_418_residues MQIIIFEDERVSFLKPLANLKPVYGLVSGFLSLDEKFQHYIGAAHPLSYHLRRYLAPFFSEQHPDRLVNSIEDDDVLFVN GRLICDKRVAQIVATGGVDSGHALVQGDDLVLARVRRDRLRLDQDEMLTDLIDTAELSSGLVVDKVSGFRMIRYVWDAIG FHAAELKNDSETLELGCIEGNVHPSAVMVNRSNVYIGADAVVKAGAVIDATEGFVAVGCGAVVEPQAVLMNSVYLAPWSK ANIGAKIYSNVAVGLASKVGGEVEDSIIEPFANKQHDGFLGHSYLSSWCNLGAGTNTSDLKNNYSKIVLDMGSHKVLTDL QFLGLIMGDHSKSSINSMFNTGTIVGTSANVFGEGFPPKYIPSFSWAGSAAGIEPYELDKAVGTARKVMERRRVSMSLSY EAMFRFLALREQGGEVFI >Mature_418_residues MQIIIFEDERVSFLKPLANLKPVYGLVSGFLSLDEKFQHYIGAAHPLSYHLRRYLAPFFSEQHPDRLVNSIEDDDVLFVN GRLICDKRVAQIVATGGVDSGHALVQGDDLVLARVRRDRLRLDQDEMLTDLIDTAELSSGLVVDKVSGFRMIRYVWDAIG FHAAELKNDSETLELGCIEGNVHPSAVMVNRSNVYIGADAVVKAGAVIDATEGFVAVGCGAVVEPQAVLMNSVYLAPWSK ANIGAKIYSNVAVGLASKVGGEVEDSIIEPFANKQHDGFLGHSYLSSWCNLGAGTNTSDLKNNYSKIVLDMGSHKVLTDL QFLGLIMGDHSKSSINSMFNTGTIVGTSANVFGEGFPPKYIPSFSWAGSAAGIEPYELDKAVGTARKVMERRRVSMSLSY EAMFRFLALREQGGEVFI
Specific function: Unknown
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45592; Mature: 45592
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIIIFEDERVSFLKPLANLKPVYGLVSGFLSLDEKFQHYIGAAHPLSYHLRRYLAPFFS CEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC EQHPDRLVNSIEDDDVLFVNGRLICDKRVAQIVATGGVDSGHALVQGDDLVLARVRRDRL CCCHHHHHHCCCCCCEEEECCEEEEHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH RLDQDEMLTDLIDTAELSSGLVVDKVSGFRMIRYVWDAIGFHAAELKNDSETLELGCIEG CCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC NVHPSAVMVNRSNVYIGADAVVKAGAVIDATEGFVAVGCGAVVEPQAVLMNSVYLAPWSK CCCCCEEEEECCCEEECCHHHHHCCCEEECCCCEEEECCCCCCCCHHHHHCCEEECCCCC ANIGAKIYSNVAVGLASKVGGEVEDSIIEPFANKQHDGFLGHSYLSSWCNLGAGTNTSDL CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHH KNNYSKIVLDMGSHKVLTDLQFLGLIMGDHSKSSINSMFNTGTIVGTSANVFGEGFPPKY HCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCHHHCCCCCCCCC IPSFSWAGSAAGIEPYELDKAVGTARKVMERRRVSMSLSYEAMFRFLALREQGGEVFI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQIIIFEDERVSFLKPLANLKPVYGLVSGFLSLDEKFQHYIGAAHPLSYHLRRYLAPFFS CEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC EQHPDRLVNSIEDDDVLFVNGRLICDKRVAQIVATGGVDSGHALVQGDDLVLARVRRDRL CCCHHHHHHCCCCCCEEEECCEEEEHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH RLDQDEMLTDLIDTAELSSGLVVDKVSGFRMIRYVWDAIGFHAAELKNDSETLELGCIEG CCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC NVHPSAVMVNRSNVYIGADAVVKAGAVIDATEGFVAVGCGAVVEPQAVLMNSVYLAPWSK CCCCCEEEEECCCEEECCHHHHHCCCEEECCCCEEEECCCCCCCCHHHHHCCEEECCCCC ANIGAKIYSNVAVGLASKVGGEVEDSIIEPFANKQHDGFLGHSYLSSWCNLGAGTNTSDL CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHH KNNYSKIVLDMGSHKVLTDLQFLGLIMGDHSKSSINSMFNTGTIVGTSANVFGEGFPPKY HCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCHHHCCCCCCCCC IPSFSWAGSAAGIEPYELDKAVGTARKVMERRRVSMSLSYEAMFRFLALREQGGEVFI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA