| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is recX [H]
Identifier: 119357799
GI number: 119357799
Start: 2321195
End: 2321722
Strand: Direct
Name: recX [H]
Synonym: Cpha266_2007
Alternate gene names: 119357799
Gene position: 2321195-2321722 (Clockwise)
Preceding gene: 119357782
Following gene: 119357805
Centisome position: 74.07
GC content: 48.3
Gene sequence:
>528_bases ATGGAGCTTCCGAATAGCGATGAGCATCAACGTTTTCAGTCAATGGATAAAAACGCCCTTCCTGATGCTTTTGCCTATGC TATGAGGGTGCTCGCGCTCCGCAGCCACAGCAGCGAAGAGCTTCTGCGAAAACTCCTGAAAAAAAAGCATGCAATCCCGG TTGCGGAAGCGACCATTGAGCGTCTTAAGATGCTCAAACTTCTTGACGATGAATCGTTCGCTCGTGAATTGATCAGCAGC AGGTCTCGAAAAAGACCACAGGGAACCATAAAAATGCGCGCGGAGCTTACAGCAAAAGGGGTCTCTGAAACCATTATCGC AGATCTTCTCAGCCAATACGACAGCGCAACGCTCTGTTACCAGGCTGGCCTGAAAAAACTGGCCACCCTGAAAGGCGCTG ATAATGCAGCAGCAAAAAGTAAACTCGAACGATTTCTTTATAACAGGGGATTTGAGTGGCATGCCATTGAGCAGACCGTC AAACGACTTCTTTCGCTATCCACCTCTTCAGAAGATGAGATGGATTAG
Upstream 100 bases:
>100_bases GCGTTCAGAAACCATCTTCGAGCCGAACTCGAAGCGCTCGAGCATGACCATGAGTTCGACAAATCGATGTTTGAAAACAT CAGGTAAAACCAAATAAGGT
Downstream 100 bases:
>100_bases TCTGACTCAGGCATGAACGAGCGTGCCGATCTCTTCGCCGCACAGCAACCGCGAAAAATTACCGCTTTCGTTCATGTTCA TGACGACAATCGGAAGCAGG
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MELPNSDEHQRFQSMDKNALPDAFAYAMRVLALRSHSSEELLRKLLKKKHAIPVAEATIERLKMLKLLDDESFARELISS RSRKRPQGTIKMRAELTAKGVSETIIADLLSQYDSATLCYQAGLKKLATLKGADNAAAKSKLERFLYNRGFEWHAIEQTV KRLLSLSTSSEDEMD
Sequences:
>Translated_175_residues MELPNSDEHQRFQSMDKNALPDAFAYAMRVLALRSHSSEELLRKLLKKKHAIPVAEATIERLKMLKLLDDESFARELISS RSRKRPQGTIKMRAELTAKGVSETIIADLLSQYDSATLCYQAGLKKLATLKGADNAAAKSKLERFLYNRGFEWHAIEQTV KRLLSLSTSSEDEMD >Mature_175_residues MELPNSDEHQRFQSMDKNALPDAFAYAMRVLALRSHSSEELLRKLLKKKHAIPVAEATIERLKMLKLLDDESFARELISS RSRKRPQGTIKMRAELTAKGVSETIIADLLSQYDSATLCYQAGLKKLATLKGADNAAAKSKLERFLYNRGFEWHAIEQTV KRLLSLSTSSEDEMD
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 19828; Mature: 19828
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELPNSDEHQRFQSMDKNALPDAFAYAMRVLALRSHSSEELLRKLLKKKHAIPVAEATIE CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHH RLKMLKLLDDESFARELISSRSRKRPQGTIKMRAELTAKGVSETIIADLLSQYDSATLCY HHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QAGLKKLATLKGADNAAAKSKLERFLYNRGFEWHAIEQTVKRLLSLSTSSEDEMD HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MELPNSDEHQRFQSMDKNALPDAFAYAMRVLALRSHSSEELLRKLLKKKHAIPVAEATIE CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHH RLKMLKLLDDESFARELISSRSRKRPQGTIKMRAELTAKGVSETIIADLLSQYDSATLCY HHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QAGLKKLATLKGADNAAAKSKLERFLYNRGFEWHAIEQTVKRLLSLSTSSEDEMD HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA