Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119357779

Identifier: 119357779

GI number: 119357779

Start: 2299380

End: 2300060

Strand: Direct

Name: 119357779

Synonym: Cpha266_1986

Alternate gene names: NA

Gene position: 2299380-2300060 (Clockwise)

Preceding gene: 119357778

Following gene: 119357782

Centisome position: 73.37

GC content: 52.13

Gene sequence:

>681_bases
ATGGCTCAAAAAAACGAAAAAATGAAGCGAGGAGAGCATGAGGCAAGCTGCCTGGATTGCGGCCTTTTGAACTGCTATCG
GCAGGAAAGCCGGTTTCCGGATTTCTGTCCGGGAGAGGGTATTGAAACCAGGAAGCTTGAGCGCGTTATCGCCGAGTACT
GCGGAGAAGAAACCGATGCCCGGACTGCCATGGCGGCAGCCGAAGTGGAAGGGATGTATTACGGCAAGCTGACCCGCGTT
GAGGAGGTTCTTGCTTTTGCCCGTCGCATCGGCGCGCATAAAATCGGCCTTGCCACCTGTGTCGGACTGATCGAGGAGAC
CCGGACTTTTTCGAAGATTCTGAAGGGAAACGGATTTGAGCCATATGCCGTACTGTGCAAGATCGGTTCCGTGGACAAAC
ATGAAATCGGCATCCCGGAAAATCTGAAAATACGACCGGAAAGCTTCGAAGCGCTTTGCAATCCGCTGCTGCAGGCAACG
ATGCTTAATGAATGGAAGTCGGAATTGAATGTCGTAATCGGACTCTGCGTCGGGCATGATGCTCTTTTCAGCAAACATTC
CGAAGCGTTGGTAACAACTCTCATTGTCAAGGACAGGGTGCTTGCACATAACCCCGCAGCCGCGCTCTATACCAGCGGTT
CGTATTACAGACGGTTGCTGGATAACGATCGGAATCTGTAA

Upstream 100 bases:

>100_bases
CGGCAAGTAATGGGTACGGATTTTTTTTTAATCCGCCAACACATCGAATATAACCCGAACAACAACGCATACCTTGAAAC
CTGCATTGAATGGTTGCCCT

Downstream 100 bases:

>100_bases
TGGCCTGCCCCCCTGCTTTCACAGAGCACAGCCCCGGGATTTACTGCATACGACTCCTTATGAACACGAGGAAGGGAACC
CGATAAAAACATCGGGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MAQKNEKMKRGEHEASCLDCGLLNCYRQESRFPDFCPGEGIETRKLERVIAEYCGEETDARTAMAAAEVEGMYYGKLTRV
EEVLAFARRIGAHKIGLATCVGLIEETRTFSKILKGNGFEPYAVLCKIGSVDKHEIGIPENLKIRPESFEALCNPLLQAT
MLNEWKSELNVVIGLCVGHDALFSKHSEALVTTLIVKDRVLAHNPAAALYTSGSYYRRLLDNDRNL

Sequences:

>Translated_226_residues
MAQKNEKMKRGEHEASCLDCGLLNCYRQESRFPDFCPGEGIETRKLERVIAEYCGEETDARTAMAAAEVEGMYYGKLTRV
EEVLAFARRIGAHKIGLATCVGLIEETRTFSKILKGNGFEPYAVLCKIGSVDKHEIGIPENLKIRPESFEALCNPLLQAT
MLNEWKSELNVVIGLCVGHDALFSKHSEALVTTLIVKDRVLAHNPAAALYTSGSYYRRLLDNDRNL
>Mature_225_residues
AQKNEKMKRGEHEASCLDCGLLNCYRQESRFPDFCPGEGIETRKLERVIAEYCGEETDARTAMAAAEVEGMYYGKLTRVE
EVLAFARRIGAHKIGLATCVGLIEETRTFSKILKGNGFEPYAVLCKIGSVDKHEIGIPENLKIRPESFEALCNPLLQATM
LNEWKSELNVVIGLCVGHDALFSKHSEALVTTLIVKDRVLAHNPAAALYTSGSYYRRLLDNDRNL

Specific function: Unknown

COG id: COG4887

COG function: function code R; Uncharacterized metal-binding protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014997 [H]

Pfam domain/function: PF08901 DUF1847 [H]

EC number: NA

Molecular weight: Translated: 25230; Mature: 25099

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQKNEKMKRGEHEASCLDCGLLNCYRQESRFPDFCPGEGIETRKLERVIAEYCGEETDA
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
RTAMAAAEVEGMYYGKLTRVEEVLAFARRIGAHKIGLATCVGLIEETRTFSKILKGNGFE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PYAVLCKIGSVDKHEIGIPENLKIRPESFEALCNPLLQATMLNEWKSELNVVIGLCVGHD
HHHHHEECCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ALFSKHSEALVTTLIVKDRVLAHNPAAALYTSGSYYRRLLDNDRNL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECHHHHHHHHHCCCCC
>Mature Secondary Structure 
AQKNEKMKRGEHEASCLDCGLLNCYRQESRFPDFCPGEGIETRKLERVIAEYCGEETDA
CCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
RTAMAAAEVEGMYYGKLTRVEEVLAFARRIGAHKIGLATCVGLIEETRTFSKILKGNGFE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PYAVLCKIGSVDKHEIGIPENLKIRPESFEALCNPLLQATMLNEWKSELNVVIGLCVGHD
HHHHHEECCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ALFSKHSEALVTTLIVKDRVLAHNPAAALYTSGSYYRRLLDNDRNL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]