| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357778
Identifier: 119357778
GI number: 119357778
Start: 2298616
End: 2299077
Strand: Direct
Name: 119357778
Synonym: Cpha266_1985
Alternate gene names: NA
Gene position: 2298616-2299077 (Clockwise)
Preceding gene: 119357774
Following gene: 119357779
Centisome position: 73.35
GC content: 47.84
Gene sequence:
>462_bases ATGGACAGAGCTACAGCACTTCTTCGCCTGAAATCCATTCAAAAACCGATCCTTCTCGACGGTGGATATTCGAAGGTTGG TCGTACGTTTTTTGTTCTGATTGACGCGGGTCTGATTACCGTTGATTGCCGGATATACGACCCCATAATCGGGCCTATCG AGTTTTCCCTCGATCAGTACGCTGAAATAAAAGAAATTGCACGGGAGAGTTTATCTCTTGCGGAAAGTGACGATCTCGAT CCTGATGAAAAACTGTTTCTGTTCAACAACGGAAAACCCGGAGTGCCATACTGGGCATTTCAGCCGCACGACGAAGCTGC GCTTGGCGAATATCTTCTCTCCGCAGATAAAACCGAAATTGAACAGGCATTCGTCGAACAGTCGCTTTCCCTTGAAGTCG AAGCCTGGGATGCTCAGAATGATGCATCATTGAGAGCGTGGGCCGGAAAAATCGTATCGTAG
Upstream 100 bases:
>100_bases TTTCTGAAAATCCGCCTAAAACTTCTTTCCTTAGCTTCTTATTGGGTAAATTAGAGCGTTGCAACCGATACGCTTGCCGT TAAAAAGTCTAAACCAACTG
Downstream 100 bases:
>100_bases GACATGCGGCGGAATAAATGCCCATGGAGTATACGGTTCTCTTCTTTCGCAAAACAGGAAATACAGGAATTGAACTCTTC TCCCTGGCTGTTGCGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MDRATALLRLKSIQKPILLDGGYSKVGRTFFVLIDAGLITVDCRIYDPIIGPIEFSLDQYAEIKEIARESLSLAESDDLD PDEKLFLFNNGKPGVPYWAFQPHDEAALGEYLLSADKTEIEQAFVEQSLSLEVEAWDAQNDASLRAWAGKIVS
Sequences:
>Translated_153_residues MDRATALLRLKSIQKPILLDGGYSKVGRTFFVLIDAGLITVDCRIYDPIIGPIEFSLDQYAEIKEIARESLSLAESDDLD PDEKLFLFNNGKPGVPYWAFQPHDEAALGEYLLSADKTEIEQAFVEQSLSLEVEAWDAQNDASLRAWAGKIVS >Mature_153_residues MDRATALLRLKSIQKPILLDGGYSKVGRTFFVLIDAGLITVDCRIYDPIIGPIEFSLDQYAEIKEIARESLSLAESDDLD PDEKLFLFNNGKPGVPYWAFQPHDEAALGEYLLSADKTEIEQAFVEQSLSLEVEAWDAQNDASLRAWAGKIVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17052; Mature: 17052
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRATALLRLKSIQKPILLDGGYSKVGRTFFVLIDAGLITVDCRIYDPIIGPIEFSLDQY CCHHHHHHHHHHCCCCEEEECCCHHHCCEEEEEEECCEEEEEEEEECCCCCCCHHCHHHH AEIKEIARESLSLAESDDLDPDEKLFLFNNGKPGVPYWAFQPHDEAALGEYLLSADKTEI HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCHHHH EQAFVEQSLSLEVEAWDAQNDASLRAWAGKIVS HHHHHHHHCCEEEEEECCCCCCCHHHHHHCCCC >Mature Secondary Structure MDRATALLRLKSIQKPILLDGGYSKVGRTFFVLIDAGLITVDCRIYDPIIGPIEFSLDQY CCHHHHHHHHHHCCCCEEEECCCHHHCCEEEEEEECCEEEEEEEEECCCCCCCHHCHHHH AEIKEIARESLSLAESDDLDPDEKLFLFNNGKPGVPYWAFQPHDEAALGEYLLSADKTEI HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCHHHH EQAFVEQSLSLEVEAWDAQNDASLRAWAGKIVS HHHHHHHHCCEEEEEECCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA