| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357699
Identifier: 119357699
GI number: 119357699
Start: 2211310
End: 2212200
Strand: Reverse
Name: 119357699
Synonym: Cpha266_1903
Alternate gene names: NA
Gene position: 2212200-2211310 (Counterclockwise)
Preceding gene: 119357700
Following gene: 119357698
Centisome position: 70.59
GC content: 53.87
Gene sequence:
>891_bases ATGCCGTCGGAAACAGTTACCATCGCACTTCTTCAAACAACATCGTCAGAAAGACCGGAAGAGAACCTCGCCGAAGCGGA TCGCCTTATCAGGAGCGCTGCTGCCGGCGGAGCACAGGTTATCTGCCTGCAGGAGCTGTTCACCACACGGTACTTCTGTC AGATCGAGGATTATGAACCCTTTGCTTACGCTGAACCTGTTCCCGGTCCGACAACCCAGGCTTTGCAGGAACTGGCACGC GAGCTTCAGGTCGTCATCGTCGCCTCGCTTTTTGAAGCGCGGGCCAGAGGTCTCTATCATAATACCGCTGCGGTTATCGA TGCAGATGGCAGCTATCTCGGCAAGTACAGGAAAATGCATATTCCCGATGATCCCGGGTTTTACGAGAAGTTTTATTTCA CCCCCGGAGATCTCGGTTACAAAGTTTTTAAAACCCGGTATGCAACCATCGGCGTTCTGATCTGCTGGGATCAATGGTAC CCTGAAGCGGCAAGGCTGGTTGCGCTCAGGGGTGCCGAAATCATTTTTTATCCAACGGCCATAGGCTGGGCAGCCAGCGA GATTTCCGACGAGGTACGCCGAGCGCAACGGACAGCATGGAAAACCATGCAGCTCAGCCATGCGGTTGCCAATGGCGTAT TTGTCGCTGCGGCCAACAGGGTTGGTACTGAAGGTGAGCTTGAGTTCTGGGGAAACAGCTTTGTCTCTGATCCTTTTGGT CAGGTTATTGCCGAAGCTCCCCATCAGAACGAAGCCGTTCTGCTTGCCCGGTGCGATCTCGGTCGTATCGGATACTACCG TTCGCACTGGCCTTTTTTGCGTGATCGTCGCATTGAATCCTACGGGGATGTGCAGAAGCGCTACATAGATGCCGATAGCG GACAGGGTTAG
Upstream 100 bases:
>100_bases GGGCGTTGAACGATGTTCTTGCCGGTACGGGAAAAGTCATGACTATTCACGGCCTTCTTTTTGCCGCGGGGCTTCTCATT CACTAACAACGATGATATCA
Downstream 100 bases:
>100_bases GGGGGAGATCGTGTTAAGAGTTAAGGGTTAAGATGGAAGAGGGACGACTCGAATATCTTTTTAGCATCCGGAATACCCTT TTTGCAGCCCGAATTTCTTT
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MPSETVTIALLQTTSSERPEENLAEADRLIRSAAAGGAQVICLQELFTTRYFCQIEDYEPFAYAEPVPGPTTQALQELAR ELQVVIVASLFEARARGLYHNTAAVIDADGSYLGKYRKMHIPDDPGFYEKFYFTPGDLGYKVFKTRYATIGVLICWDQWY PEAARLVALRGAEIIFYPTAIGWAASEISDEVRRAQRTAWKTMQLSHAVANGVFVAAANRVGTEGELEFWGNSFVSDPFG QVIAEAPHQNEAVLLARCDLGRIGYYRSHWPFLRDRRIESYGDVQKRYIDADSGQG
Sequences:
>Translated_296_residues MPSETVTIALLQTTSSERPEENLAEADRLIRSAAAGGAQVICLQELFTTRYFCQIEDYEPFAYAEPVPGPTTQALQELAR ELQVVIVASLFEARARGLYHNTAAVIDADGSYLGKYRKMHIPDDPGFYEKFYFTPGDLGYKVFKTRYATIGVLICWDQWY PEAARLVALRGAEIIFYPTAIGWAASEISDEVRRAQRTAWKTMQLSHAVANGVFVAAANRVGTEGELEFWGNSFVSDPFG QVIAEAPHQNEAVLLARCDLGRIGYYRSHWPFLRDRRIESYGDVQKRYIDADSGQG >Mature_295_residues PSETVTIALLQTTSSERPEENLAEADRLIRSAAAGGAQVICLQELFTTRYFCQIEDYEPFAYAEPVPGPTTQALQELARE LQVVIVASLFEARARGLYHNTAAVIDADGSYLGKYRKMHIPDDPGFYEKFYFTPGDLGYKVFKTRYATIGVLICWDQWYP EAARLVALRGAEIIFYPTAIGWAASEISDEVRRAQRTAWKTMQLSHAVANGVFVAAANRVGTEGELEFWGNSFVSDPFGQ VIAEAPHQNEAVLLARCDLGRIGYYRSHWPFLRDRRIESYGDVQKRYIDADSGQG
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=286, Percent_Identity=32.8671328671329, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI7706509, Length=274, Percent_Identity=32.4817518248175, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI5031947, Length=293, Percent_Identity=27.3037542662116, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI297632348, Length=293, Percent_Identity=27.6450511945392, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI297632350, Length=293, Percent_Identity=27.6450511945392, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI297632346, Length=189, Percent_Identity=28.042328042328, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17533173, Length=273, Percent_Identity=34.7985347985348, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17556280, Length=283, Percent_Identity=25.0883392226148, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323383, Length=296, Percent_Identity=27.7027027027027, Blast_Score=107, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6322335, Length=318, Percent_Identity=23.8993710691824, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI21358471, Length=305, Percent_Identity=30.4918032786885, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI21355835, Length=297, Percent_Identity=27.9461279461279, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI17933642, Length=284, Percent_Identity=23.943661971831, Blast_Score=79, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 33185; Mature: 33053
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSETVTIALLQTTSSERPEENLAEADRLIRSAAAGGAQVICLQELFTTRYFCQIEDYEP CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCEEEEEEECCCC FAYAEPVPGPTTQALQELARELQVVIVASLFEARARGLYHNTAAVIDADGSYLGKYRKMH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCEEC IPDDPGFYEKFYFTPGDLGYKVFKTRYATIGVLICWDQWYPEAARLVALRGAEIIFYPTA CCCCCCCCCEEEECCCCCCHHHHHHHHEEEEEEEEECCCCCHHHHEEEECCCEEEEECCC IGWAASEISDEVRRAQRTAWKTMQLSHAVANGVFVAAANRVGTEGELEFWGNSFVSDPFG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEECCCCCCCCHHH QVIAEAPHQNEAVLLARCDLGRIGYYRSHWPFLRDRRIESYGDVQKRYIDADSGQG HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHHHEECCCCCCC >Mature Secondary Structure PSETVTIALLQTTSSERPEENLAEADRLIRSAAAGGAQVICLQELFTTRYFCQIEDYEP CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCEEEEEEECCCC FAYAEPVPGPTTQALQELARELQVVIVASLFEARARGLYHNTAAVIDADGSYLGKYRKMH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCEEC IPDDPGFYEKFYFTPGDLGYKVFKTRYATIGVLICWDQWYPEAARLVALRGAEIIFYPTA CCCCCCCCCEEEECCCCCCHHHHHHHHEEEEEEEEECCCCCHHHHEEEECCCEEEEECCC IGWAASEISDEVRRAQRTAWKTMQLSHAVANGVFVAAANRVGTEGELEFWGNSFVSDPFG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEECCCCCCCCHHH QVIAEAPHQNEAVLLARCDLGRIGYYRSHWPFLRDRRIESYGDVQKRYIDADSGQG HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]