| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is menA [H]
Identifier: 119357700
GI number: 119357700
Start: 2212215
End: 2213069
Strand: Reverse
Name: menA [H]
Synonym: Cpha266_1904
Alternate gene names: 119357700
Gene position: 2213069-2212215 (Counterclockwise)
Preceding gene: 119357701
Following gene: 119357699
Centisome position: 70.62
GC content: 52.28
Gene sequence:
>855_bases ATGCTTGCCGTACGTCCAAAAACTCTTCCGGCGGGCGCCGTGCCGGTGTTGCTTGGTTCCGCGCTTGCGGCTGCTGATGA CCGCTTCAGTCTGTTCTCTGCTTTGATTGCTCTTTTCTGCGCGCTGGGCATTCAGATAGCAACCAATTTCATCAACGAGA TATACGATTTTCGCAAAGGGGCAGATACGGTTCAGAGGCTCGGCCCAACAAGAACCGTTGCTGCCGGAATTATCAGCGAA AAGACCATGATTCGTGTATCGGCCACCCTTCTGATATCTGTTTTTCTGCTGGGACTCGTTCTTGTGTACAGCGCCGGCTG GCCGATTTTACTGGTAGGTTTGCTCTCTATGCTTTTCGCCTGGGCTTATACCGGCGGACCTTATCCGATTGCCTATTCAG GGCTTGGGGATGTTTTTGTTTTTATTTTTTTCGGACTGGTTGCGACAGGAGGTACCTACTATGTGCAGGCGCTTGAGCTG CATTCCTCAATACTTCTTGCTGCGGCGGCTCCAGGAGCTTTTTCTGTCAATATTCTTCTGGTTAACAATATCCGGGATAT CGACACCGACCGTACTGTCGGCAAGATGACGTTGCCAGCCCGTATCGGTGCTGCGTCGGCAAGAAAGCTCTATGTTCTGC TGACTGTGCTCGCATATCTTGTTCCGGTGGCGGTATGGATGAATGGCTACTCCGTTTGGAGTCTGCTCTCACTCCTCTCT TTTCCTCTTGCGGTCGGCATGATCCGTGCGCTCTACGCTTCCGGGGGCAGGGCGTTGAACGATGTTCTTGCCGGTACGGG AAAAGTCATGACTATTCACGGCCTTCTTTTTGCCGCGGGGCTTCTCATTCACTAA
Upstream 100 bases:
>100_bases AAGCACACCTTCAGCAGTGTTAAAATGGCCAGGGAAAAAAAGAATGCAAAATGAGATTTCGTCAACCCCTGCTCCCGCAT TGACTCCGTTCGGGGCATGG
Downstream 100 bases:
>100_bases CAACGATGATATCAATGCCGTCGGAAACAGTTACCATCGCACTTCTTCAAACAACATCGTCAGAAAGACCGGAAGAGAAC CTCGCCGAAGCGGATCGCCT
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MLAVRPKTLPAGAVPVLLGSALAAADDRFSLFSALIALFCALGIQIATNFINEIYDFRKGADTVQRLGPTRTVAAGIISE KTMIRVSATLLISVFLLGLVLVYSAGWPILLVGLLSMLFAWAYTGGPYPIAYSGLGDVFVFIFFGLVATGGTYYVQALEL HSSILLAAAAPGAFSVNILLVNNIRDIDTDRTVGKMTLPARIGAASARKLYVLLTVLAYLVPVAVWMNGYSVWSLLSLLS FPLAVGMIRALYASGGRALNDVLAGTGKVMTIHGLLFAAGLLIH
Sequences:
>Translated_284_residues MLAVRPKTLPAGAVPVLLGSALAAADDRFSLFSALIALFCALGIQIATNFINEIYDFRKGADTVQRLGPTRTVAAGIISE KTMIRVSATLLISVFLLGLVLVYSAGWPILLVGLLSMLFAWAYTGGPYPIAYSGLGDVFVFIFFGLVATGGTYYVQALEL HSSILLAAAAPGAFSVNILLVNNIRDIDTDRTVGKMTLPARIGAASARKLYVLLTVLAYLVPVAVWMNGYSVWSLLSLLS FPLAVGMIRALYASGGRALNDVLAGTGKVMTIHGLLFAAGLLIH >Mature_284_residues MLAVRPKTLPAGAVPVLLGSALAAADDRFSLFSALIALFCALGIQIATNFINEIYDFRKGADTVQRLGPTRTVAAGIISE KTMIRVSATLLISVFLLGLVLVYSAGWPILLVGLLSMLFAWAYTGGPYPIAYSGLGDVFVFIFFGLVATGGTYYVQALEL HSSILLAAAAPGAFSVNILLVNNIRDIDTDRTVGKMTLPARIGAASARKLYVLLTVLAYLVPVAVWMNGYSVWSLLSLLS FPLAVGMIRALYASGGRALNDVLAGTGKVMTIHGLLFAAGLLIH
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Homo sapiens, GI7019551, Length=296, Percent_Identity=31.0810810810811, Blast_Score=84, Evalue=1e-16, Organism=Escherichia coli, GI1790365, Length=290, Percent_Identity=35.1724137931034, Blast_Score=145, Evalue=2e-36, Organism=Drosophila melanogaster, GI17737429, Length=284, Percent_Identity=29.5774647887324, Blast_Score=88, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 30026; Mature: 30026
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAVRPKTLPAGAVPVLLGSALAAADDRFSLFSALIALFCALGIQIATNFINEIYDFRKG CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADTVQRLGPTRTVAAGIISEKTMIRVSATLLISVFLLGLVLVYSAGWPILLVGLLSMLFA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WAYTGGPYPIAYSGLGDVFVFIFFGLVATGGTYYVQALELHSSILLAAAAPGAFSVNILL HHHCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCEEEEEEE VNNIRDIDTDRTVGKMTLPARIGAASARKLYVLLTVLAYLVPVAVWMNGYSVWSLLSLLS EECCCCCCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH FPLAVGMIRALYASGGRALNDVLAGTGKVMTIHGLLFAAGLLIH HHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MLAVRPKTLPAGAVPVLLGSALAAADDRFSLFSALIALFCALGIQIATNFINEIYDFRKG CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADTVQRLGPTRTVAAGIISEKTMIRVSATLLISVFLLGLVLVYSAGWPILLVGLLSMLFA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WAYTGGPYPIAYSGLGDVFVFIFFGLVATGGTYYVQALELHSSILLAAAAPGAFSVNILL HHHCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCEEEEEEE VNNIRDIDTDRTVGKMTLPARIGAASARKLYVLLTVLAYLVPVAVWMNGYSVWSLLSLLS EECCCCCCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH FPLAVGMIRALYASGGRALNDVLAGTGKVMTIHGLLFAAGLLIH HHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9573170; 8346018; 9278503 [H]