| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357511
Identifier: 119357511
GI number: 119357511
Start: 1942300
End: 1943085
Strand: Reverse
Name: 119357511
Synonym: Cpha266_1713
Alternate gene names: NA
Gene position: 1943085-1942300 (Counterclockwise)
Preceding gene: 119357512
Following gene: 119357510
Centisome position: 62.0
GC content: 47.96
Gene sequence:
>786_bases ATGACTATTGACGTGAACATACTCCAGAACACACTTTGCAAAGCGATGTGCAGCGAAGTGAAGATAAGGGAAAAAAGCGC AGGTCTGCTGGCTGTTGATACTCCGTTTACATTTCCTGATGGGGATCAGTATCAGCTATACATAAAGGTTATGCCGGGGG GGCTGCTTAGGCTTACCGATATGGGGCATACACTGATGCATCTGAGCTATGAGCATGATATAGACAAGTTTTGTGAAGGC ACGAGAGGTGCTCTTTACGAAAAGATAAAGTCCGAAACATCTGTTGAGGAGCATGATGGTTCCTTGTGCATTGATTCGAC GTCGGAACAGCTTGCTGCTGATATTTTTCGTTTGGGTCAGGCGATTACGAGCATCAGTGACTTGACGTTTTTAAAGAGAT CGCGGATAGAGTCCACATTCTACGATGATCTCAGGGACTCACTGTTCAGGGTTGTTCCGGCTGAAAAGGTCAAAAAAGAT TATCTCTACGAAGGGATGGCAAATGCGTCGGATTACCCGATCGACTACTGGATCGAAGGGAGGGAGGCTCCGGTTTTTCT CTTCGGTATTCCCGGTCGTGACAAGGCCAAGACGGTTACGATTATTCTTGAGCATCTGCTGAGAGCCAATGCCACGTTCG AAAGCATTCTCGTGTTTTCGGATCAGAGTTCCTTGCCTCGCGCCGATCTGGCCCGGCTTACAAACGTAAGCGATACCATG ATCTCCTCTCTCGATGCCGAGTCCGATTTCAGGCGGAAGCTTGAGAAAAAGGCACAACTGAACTGA
Upstream 100 bases:
>100_bases ATAATCTGAATGAAGCACTCCATTGCCTGCTCAAGGATTGCCGTATTGAAGGCTTGACTTTGGGTGAAGTCGGCCTAAAC CAGATTGACTTGTTTGAGTG
Downstream 100 bases:
>100_bases TATTTATTCATTTCCCGGAGCATTACCCCGCCTGACGGTTGATGTTTTCGAAAACGTTATGCATCAGCTTTCGAGCTATG AACGTCTTGAAGGCTTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTIDVNILQNTLCKAMCSEVKIREKSAGLLAVDTPFTFPDGDQYQLYIKVMPGGLLRLTDMGHTLMHLSYEHDIDKFCEG TRGALYEKIKSETSVEEHDGSLCIDSTSEQLAADIFRLGQAITSISDLTFLKRSRIESTFYDDLRDSLFRVVPAEKVKKD YLYEGMANASDYPIDYWIEGREAPVFLFGIPGRDKAKTVTIILEHLLRANATFESILVFSDQSSLPRADLARLTNVSDTM ISSLDAESDFRRKLEKKAQLN
Sequences:
>Translated_261_residues MTIDVNILQNTLCKAMCSEVKIREKSAGLLAVDTPFTFPDGDQYQLYIKVMPGGLLRLTDMGHTLMHLSYEHDIDKFCEG TRGALYEKIKSETSVEEHDGSLCIDSTSEQLAADIFRLGQAITSISDLTFLKRSRIESTFYDDLRDSLFRVVPAEKVKKD YLYEGMANASDYPIDYWIEGREAPVFLFGIPGRDKAKTVTIILEHLLRANATFESILVFSDQSSLPRADLARLTNVSDTM ISSLDAESDFRRKLEKKAQLN >Mature_260_residues TIDVNILQNTLCKAMCSEVKIREKSAGLLAVDTPFTFPDGDQYQLYIKVMPGGLLRLTDMGHTLMHLSYEHDIDKFCEGT RGALYEKIKSETSVEEHDGSLCIDSTSEQLAADIFRLGQAITSISDLTFLKRSRIESTFYDDLRDSLFRVVPAEKVKKDY LYEGMANASDYPIDYWIEGREAPVFLFGIPGRDKAKTVTIILEHLLRANATFESILVFSDQSSLPRADLARLTNVSDTMI SSLDAESDFRRKLEKKAQLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29456; Mature: 29325
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDVNILQNTLCKAMCSEVKIREKSAGLLAVDTPFTFPDGDQYQLYIKVMPGGLLRLTD CEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEC MGHTLMHLSYEHDIDKFCEGTRGALYEKIKSETSVEEHDGSLCIDSTSEQLAADIFRLGQ CCHHHHHCCHHCCHHHHHCCCHHHHHHHHHHHCCHHHCCCCEEECCCHHHHHHHHHHHHH AITSISDLTFLKRSRIESTFYDDLRDSLFRVVPAEKVKKDYLYEGMANASDYPIDYWIEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEECC REAPVFLFGIPGRDKAKTVTIILEHLLRANATFESILVFSDQSSLPRADLARLTNVSDTM CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCHHHHHHHCCCHHHH ISSLDAESDFRRKLEKKAQLN HHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TIDVNILQNTLCKAMCSEVKIREKSAGLLAVDTPFTFPDGDQYQLYIKVMPGGLLRLTD EEEHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEC MGHTLMHLSYEHDIDKFCEGTRGALYEKIKSETSVEEHDGSLCIDSTSEQLAADIFRLGQ CCHHHHHCCHHCCHHHHHCCCHHHHHHHHHHHCCHHHCCCCEEECCCHHHHHHHHHHHHH AITSISDLTFLKRSRIESTFYDDLRDSLFRVVPAEKVKKDYLYEGMANASDYPIDYWIEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEECC REAPVFLFGIPGRDKAKTVTIILEHLLRANATFESILVFSDQSSLPRADLARLTNVSDTM CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCHHHHHHHCCCHHHH ISSLDAESDFRRKLEKKAQLN HHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA