| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357512
Identifier: 119357512
GI number: 119357512
Start: 1943085
End: 1943582
Strand: Reverse
Name: 119357512
Synonym: Cpha266_1714
Alternate gene names: NA
Gene position: 1943582-1943085 (Counterclockwise)
Preceding gene: 119357515
Following gene: 119357511
Centisome position: 62.02
GC content: 46.18
Gene sequence:
>498_bases ATGGCTTTTGAGAGTATTACAGACGAATTTATCGAAGAGTTGATCGGTTGCCGCAAAATGGTGATCAACCCGAAAACTCG GGATGTCAACAAGCCCGGCCACAAGCAGGTCAACTATAGGGTAAAGGCGCTTGATGATTCCGGCCATAAATTCGAACTAT TTACCCGTCAGAATCTGGCGGAGGGAATGGTGGATGATTTTTCCTGTGGATTGCGGTGGCTGGCTTTCAATGGAGAAAGC CTGATCCTTTGCCGCTATAATGGATCGAGCCATCCGCACAGGAACAAGGTTGAAAACCGGAAATTGGGGTTGGTATTTCA TATTCATCGGGCTACAGAGAGATATATCGCAGCAAACCGGAAATCGGACGGATTTGCTTCTGAAACAGATAAATACCATA ATCTGAATGAAGCACTCCATTGCCTGCTCAAGGATTGCCGTATTGAAGGCTTGACTTTGGGTGAAGTCGGCCTAAACCAG ATTGACTTGTTTGAGTGA
Upstream 100 bases:
>100_bases TTAGAAATACGGTTTGACCATGTTTTTTCAACCCGTGATTGTCTGTTCAGGACAATGTCATTCCGGAACATTTCCATGAC ATAAAAGCACGCCGAAGCTC
Downstream 100 bases:
>100_bases TGACTATTGACGTGAACATACTCCAGAACACACTTTGCAAAGCGATGTGCAGCGAAGTGAAGATAAGGGAAAAAAGCGCA GGTCTGCTGGCTGTTGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAFESITDEFIEELIGCRKMVINPKTRDVNKPGHKQVNYRVKALDDSGHKFELFTRQNLAEGMVDDFSCGLRWLAFNGES LILCRYNGSSHPHRNKVENRKLGLVFHIHRATERYIAANRKSDGFASETDKYHNLNEALHCLLKDCRIEGLTLGEVGLNQ IDLFE
Sequences:
>Translated_165_residues MAFESITDEFIEELIGCRKMVINPKTRDVNKPGHKQVNYRVKALDDSGHKFELFTRQNLAEGMVDDFSCGLRWLAFNGES LILCRYNGSSHPHRNKVENRKLGLVFHIHRATERYIAANRKSDGFASETDKYHNLNEALHCLLKDCRIEGLTLGEVGLNQ IDLFE >Mature_164_residues AFESITDEFIEELIGCRKMVINPKTRDVNKPGHKQVNYRVKALDDSGHKFELFTRQNLAEGMVDDFSCGLRWLAFNGESL ILCRYNGSSHPHRNKVENRKLGLVFHIHRATERYIAANRKSDGFASETDKYHNLNEALHCLLKDCRIEGLTLGEVGLNQI DLFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18952; Mature: 18821
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFESITDEFIEELIGCRKMVINPKTRDVNKPGHKQVNYRVKALDDSGHKFELFTRQNLA CCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEHHHHH EGMVDDFSCGLRWLAFNGESLILCRYNGSSHPHRNKVENRKLGLVFHIHRATERYIAANR HHHHHHHHCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHCCC KSDGFASETDKYHNLNEALHCLLKDCRIEGLTLGEVGLNQIDLFE CCCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEECCCCCCEEECCC >Mature Secondary Structure AFESITDEFIEELIGCRKMVINPKTRDVNKPGHKQVNYRVKALDDSGHKFELFTRQNLA CCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEHHHHH EGMVDDFSCGLRWLAFNGESLILCRYNGSSHPHRNKVENRKLGLVFHIHRATERYIAANR HHHHHHHHCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHCCC KSDGFASETDKYHNLNEALHCLLKDCRIEGLTLGEVGLNQIDLFE CCCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEECCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA