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The map label for this gene is 119357240

Identifier: 119357240

GI number: 119357240

Start: 1634549

End: 1635193

Strand: Reverse

Name: 119357240

Synonym: Cpha266_1432

Alternate gene names: NA

Gene position: 1635193-1634549 (Counterclockwise)

Preceding gene: 119357241

Following gene: 119357239

Centisome position: 52.18

GC content: 53.02

Gene sequence:

>645_bases
ATGTACGATGAATCCGACTTCATAGCGCTTTCGGCATTGCAGCATTTCGTGTATTGCCCCCGGCAGTGTGCGCTAATCCA
TATCGAACAGGTATGGGCTGAAAACAGCTACACTGCCGAAGGCCGGGAGATGCATGAACGGGTTGACGACGGGGAAACGT
CGTACCGTCCGGGTGTTCGAACCACAAGGAGCGTCCCGCTACGGAGTGCTATGCTTGGCGCTTCGGGTATAGCTGACGTT
GTAGAATGGCATAAGCGAAATGGCCGTGAGGAGCCGTTCCCGATTGAGTACAAGCGAGGCCGGCAGAAAAAGCATGATGC
CGACAAGGTTCAGCTCTGTGCCCAAGCCATCTGTCTTGAAGAGATGCTGGGCATAGCCATTCCTTCTGGCGCTTTGTTCT
ATGGCCAGACAAAACGCAGGTTCGAGGTGGTTTTCGATGCTATGCTTCGAGAGAAAACCGCTGCAACTGCAGAATGCGTT
CATGAACTGTTCAGGAATGGCGTTACTCCCCTGCCGGAACCCGGCCCGAAATGTAACCAGTGCTCGTTACAGGAGCTCTG
TCTGCCTGAGGTCGTTGTCCATAGCCGGTCAGCTAAAAATTATGTGCACAAACTGCTTCGTGAACTCTCGGAGGATGAAA
TTTGA

Upstream 100 bases:

>100_bases
AGGATTCCGAAGGTCCTGCTCGTTCGTTCAAAGAATACGATGTGCTGATAGATGAATCCAGTCTTGGTGAGGTGAAGCTT
CTCCGAAAACTTGGATAAGC

Downstream 100 bases:

>100_bases
AAAAGCTGCTCAACACGCTGTTCGTTACCACGCAGGGTGCATATCTGTCGAAAGAAGGTGAGTGCGCGGTCATAAAAATC
GATAAAGTTGAAAAAGTACG

Product: CRISPR-associated Cas4 family protein

Products: NA

Alternate protein names: CRISPR-Associated Exonuclease Cas4 Family Protein; RecB Family Exonuclease; CRISPR-Associated Cas1/Cas4 Family Protein; CRISPR-Associated Exonuclease Cas4 Family; Endonuclease; Exonuclease RecB Family Protein; CRISPR-Associated Cas1 Family Protein; CRISPR-Associated Protein; Protein Be Involved In DNA Repair; Cas4 Family CRISPR-Associated Protein; Exonuclease N; PE-PGRS Family Protein; CRISPR-Associated RecB Family Exonuclease Cas4b; RecB Family Exonuclease Protein

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MYDESDFIALSALQHFVYCPRQCALIHIEQVWAENSYTAEGREMHERVDDGETSYRPGVRTTRSVPLRSAMLGASGIADV
VEWHKRNGREEPFPIEYKRGRQKKHDADKVQLCAQAICLEEMLGIAIPSGALFYGQTKRRFEVVFDAMLREKTAATAECV
HELFRNGVTPLPEPGPKCNQCSLQELCLPEVVVHSRSAKNYVHKLLRELSEDEI

Sequences:

>Translated_214_residues
MYDESDFIALSALQHFVYCPRQCALIHIEQVWAENSYTAEGREMHERVDDGETSYRPGVRTTRSVPLRSAMLGASGIADV
VEWHKRNGREEPFPIEYKRGRQKKHDADKVQLCAQAICLEEMLGIAIPSGALFYGQTKRRFEVVFDAMLREKTAATAECV
HELFRNGVTPLPEPGPKCNQCSLQELCLPEVVVHSRSAKNYVHKLLRELSEDEI
>Mature_214_residues
MYDESDFIALSALQHFVYCPRQCALIHIEQVWAENSYTAEGREMHERVDDGETSYRPGVRTTRSVPLRSAMLGASGIADV
VEWHKRNGREEPFPIEYKRGRQKKHDADKVQLCAQAICLEEMLGIAIPSGALFYGQTKRRFEVVFDAMLREKTAATAECV
HELFRNGVTPLPEPGPKCNQCSLQELCLPEVVVHSRSAKNYVHKLLRELSEDEI

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24335; Mature: 24335

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDESDFIALSALQHFVYCPRQCALIHIEQVWAENSYTAEGREMHERVDDGETSYRPGVR
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
TTRSVPLRSAMLGASGIADVVEWHKRNGREEPFPIEYKRGRQKKHDADKVQLCAQAICLE
CCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
EMLGIAIPSGALFYGQTKRRFEVVFDAMLREKTAATAECVHELFRNGVTPLPEPGPKCNQ
HHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
CSLQELCLPEVVVHSRSAKNYVHKLLRELSEDEI
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYDESDFIALSALQHFVYCPRQCALIHIEQVWAENSYTAEGREMHERVDDGETSYRPGVR
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
TTRSVPLRSAMLGASGIADVVEWHKRNGREEPFPIEYKRGRQKKHDADKVQLCAQAICLE
CCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
EMLGIAIPSGALFYGQTKRRFEVVFDAMLREKTAATAECVHELFRNGVTPLPEPGPKCNQ
HHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
CSLQELCLPEVVVHSRSAKNYVHKLLRELSEDEI
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA