Click here to switch to the map view.

The map label for this gene is 119357239

Identifier: 119357239

GI number: 119357239

Start: 1633521

End: 1634552

Strand: Reverse

Name: 119357239

Synonym: Cpha266_1431

Alternate gene names: NA

Gene position: 1634552-1633521 (Counterclockwise)

Preceding gene: 119357240

Following gene: 119357238

Centisome position: 52.16

GC content: 50.39

Gene sequence:

>1032_bases
TTGAAAAAGCTGCTCAACACGCTGTTCGTTACCACGCAGGGTGCATATCTGTCGAAAGAAGGTGAGTGCGCGGTCATAAA
AATCGATAAAGTTGAAAAAGTACGATTGCCTCTTCATATGCTTGACGGTATTATCTGTTTCGGACAGATCACCTGCAGCC
CATTTCTCATGGGTCACTGTGCAGAAAAGGGTGTGACGGTGACGTTCCTTACCGAATACGGCAAATTCCTCTGTCAGGTG
CAGGGGCCAACGAAAGGCAACATTCTGCTCAGGCGCGCACAATACCGGCAAGCAGACAACTATCAGCAGTCGGCCATGCT
TGCCCGGGCGTTCGTCATAGGAAAAATCGGCAACAGCAGGGTTACCCTTGCAAGGGCCATGCGGGACCACCCCGAAAAGG
TCGATGGCGAAAAAATGCATTATGCACAGCAACTGCTTGCCGGTTGCATTAAAAAGCTTGGCGATGAAACCGATCAAGAG
CGAATCAGGGGGATCGAGGGTGAAGCAGGAAGAATTTATTTCGAGGTATTCGACCAGTGCATCACAACTTCCGACCCGTT
GTTCCGGTTTAATGGCCGAAACCGTCGACCGCCGGTTGACCGGGTAAATTGTCTGCTTTCGTTTCTCTATACCCTTGTGA
CGCATGATATCCGCTCCGCACTTGAGTCATGCGGGCTCGATCCGGCAGCGGGTTTTCTGCACAAGGATCGCCCGGGTCGT
CCGAGCCTCGCTCTCGATATGCTCGAAGAGTTTCGTTCCTATATCGCCGACAGAATGGCATTGTCGTTAATCAATCGGGG
TCAGATTCAGGCAAATGATTTCACGGTATCCGATACTGGCGCTGTGCTGATGAAAGACGATGCAAGAAAAACCTTGCTAA
CGGCTTACCAGAAAAGAAAACAGGAAGAAATAGAACATCCGTATGTCAGGGAAAAAATGGCTGTGGGTCTCATCTGGCAT
ATGCAGGCTATGTTGCTGGCTCGGTATATCCGGGGGGATATCGATATGTACCCTCCTTTTGTCTGGAGGTAA

Upstream 100 bases:

>100_bases
GCTCGTTACAGGAGCTCTGTCTGCCTGAGGTCGTTGTCCATAGCCGGTCAGCTAAAAATTATGTGCACAAACTGCTTCGT
GAACTCTCGGAGGATGAAAT

Downstream 100 bases:

>100_bases
CCGATGTTAGTATTGGTAACCTACGACGTCAATACCGAAACGCCTGCCGGAAGGCGCAGGCTTCGCAGGATTGCGAAAAC
CTGCCAGAACTATGGCCAAC

Product: CRISPR-associated Cas1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKKLLNTLFVTTQGAYLSKEGECAVIKIDKVEKVRLPLHMLDGIICFGQITCSPFLMGHCAEKGVTVTFLTEYGKFLCQV
QGPTKGNILLRRAQYRQADNYQQSAMLARAFVIGKIGNSRVTLARAMRDHPEKVDGEKMHYAQQLLAGCIKKLGDETDQE
RIRGIEGEAGRIYFEVFDQCITTSDPLFRFNGRNRRPPVDRVNCLLSFLYTLVTHDIRSALESCGLDPAAGFLHKDRPGR
PSLALDMLEEFRSYIADRMALSLINRGQIQANDFTVSDTGAVLMKDDARKTLLTAYQKRKQEEIEHPYVREKMAVGLIWH
MQAMLLARYIRGDIDMYPPFVWR

Sequences:

>Translated_343_residues
MKKLLNTLFVTTQGAYLSKEGECAVIKIDKVEKVRLPLHMLDGIICFGQITCSPFLMGHCAEKGVTVTFLTEYGKFLCQV
QGPTKGNILLRRAQYRQADNYQQSAMLARAFVIGKIGNSRVTLARAMRDHPEKVDGEKMHYAQQLLAGCIKKLGDETDQE
RIRGIEGEAGRIYFEVFDQCITTSDPLFRFNGRNRRPPVDRVNCLLSFLYTLVTHDIRSALESCGLDPAAGFLHKDRPGR
PSLALDMLEEFRSYIADRMALSLINRGQIQANDFTVSDTGAVLMKDDARKTLLTAYQKRKQEEIEHPYVREKMAVGLIWH
MQAMLLARYIRGDIDMYPPFVWR
>Mature_343_residues
MKKLLNTLFVTTQGAYLSKEGECAVIKIDKVEKVRLPLHMLDGIICFGQITCSPFLMGHCAEKGVTVTFLTEYGKFLCQV
QGPTKGNILLRRAQYRQADNYQQSAMLARAFVIGKIGNSRVTLARAMRDHPEKVDGEKMHYAQQLLAGCIKKLGDETDQE
RIRGIEGEAGRIYFEVFDQCITTSDPLFRFNGRNRRPPVDRVNCLLSFLYTLVTHDIRSALESCGLDPAAGFLHKDRPGR
PSLALDMLEEFRSYIADRMALSLINRGQIQANDFTVSDTGAVLMKDDARKTLLTAYQKRKQEEIEHPYVREKMAVGLIWH
MQAMLLARYIRGDIDMYPPFVWR

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 39035; Mature: 39035

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLNTLFVTTQGAYLSKEGECAVIKIDKVEKVRLPLHMLDGIICFGQITCSPFLMGHC
CHHHHHHHHHCCCCCEECCCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AEKGVTVTFLTEYGKFLCQVQGPTKGNILLRRAQYRQADNYQQSAMLARAFVIGKIGNSR
HHCCCEEEEHHHHHHHEEEECCCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
VTLARAMRDHPEKVDGEKMHYAQQLLAGCIKKLGDETDQERIRGIEGEAGRIYFEVFDQC
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHH
ITTSDPLFRFNGRNRRPPVDRVNCLLSFLYTLVTHDIRSALESCGLDPAAGFLHKDRPGR
HCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
PSLALDMLEEFRSYIADRMALSLINRGQIQANDFTVSDTGAVLMKDDARKTLLTAYQKRK
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEECCCCEEEECCCHHHHHHHHHHHHH
QEEIEHPYVREKMAVGLIWHMQAMLLARYIRGDIDMYPPFVWR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKLLNTLFVTTQGAYLSKEGECAVIKIDKVEKVRLPLHMLDGIICFGQITCSPFLMGHC
CHHHHHHHHHCCCCCEECCCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AEKGVTVTFLTEYGKFLCQVQGPTKGNILLRRAQYRQADNYQQSAMLARAFVIGKIGNSR
HHCCCEEEEHHHHHHHEEEECCCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
VTLARAMRDHPEKVDGEKMHYAQQLLAGCIKKLGDETDQERIRGIEGEAGRIYFEVFDQC
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHH
ITTSDPLFRFNGRNRRPPVDRVNCLLSFLYTLVTHDIRSALESCGLDPAAGFLHKDRPGR
HCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
PSLALDMLEEFRSYIADRMALSLINRGQIQANDFTVSDTGAVLMKDDARKTLLTAYQKRK
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEECCCCEEEECCCHHHHHHHHHHHHH
QEEIEHPYVREKMAVGLIWHMQAMLLARYIRGDIDMYPPFVWR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]