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The map label for this gene is 119357241

Identifier: 119357241

GI number: 119357241

Start: 1635196

End: 1636296

Strand: Reverse

Name: 119357241

Synonym: Cpha266_1433

Alternate gene names: NA

Gene position: 1636296-1635196 (Counterclockwise)

Preceding gene: 119357242

Following gene: 119357240

Centisome position: 52.21

GC content: 45.41

Gene sequence:

>1101_bases
ATGACTACTGTAGATAAACGCTATGATTTTGTTCTACTTTTCGATGTTCAGGACGGAAACCCGAATGGCGATCCCGATGC
TGGAAATTTTCCACGAATCGATGCTGAAACCGGGATAGGGCTTGTGACTGATGTTTGCTTGAAGCGCAAGGTTAGAAATT
TTGTGCAGATAAATGATGTTCAACAGCCGGGTTATGATATTTATGTCAAGGAGAAAGCTGTGCTTGGTTTGGCTCATTTC
AAGGCATTTAAAGAGTTAGGAATCAGTACTGGCGAAATGTCAAAAAAAGTCATTAACGATCAAGAGATGATTGAAATATT
TTCTGATCTGACTTTACCAGAAGGGGTATCTTTTGCCGAGAGTGATGAACATGGAGTATTATCAATTGCTGCTGATGCGG
ATAAAAACGAGATCAAAGATTGGATGAAAGCTGAAAAAGAGAGCCTTTCTAAAAATGTTATAAAAGTTATTAGTGAGGCT
CTGAAAGAAGCAAAGCCACGGAAGCCAACTGCTGAAGAAACAAGTAGAGGCAAGGAAAAAATGTGTCAGGATTACTATGA
TATTCGAACTTTTGGTGCGGTAATGTCTTTGAAGTCAGCTCCCAATTGTGGGCAGGTGCGCGGGCCGATTCAGATGACGT
TTGCCCGCTCAGTCGAACCGATCGTGGCGTTGGAGCACAGCATTACACGAATGGCTGTAGCAACGGAAGCTGAAGCGGAA
AAGCAGAGCGGCGACAACCGAACGATGGGCCGCAAATACACCGTACCATATGGCTTGTATCGCGCTCATGGATTCGTGTC
AGCAAACCTCGCCCATCAGACAGGTTTTTCTGAAAACGATCTCGATCTGTTCTGGAACGCTCTTTTGAATATGTTCGATC
ATGACCGTTCGGCAGCTCGCGGGCTGATGTCCACGCGCGGCCTGTATGTTTTCGAGCACAGCTCAGTTTTGGGTAATGCT
CCGGCAAGCCAGCTTTTCGAGCGAATCACGGTCAAGCGCAAAGAGGATTCCGAAGGTCCTGCTCGTTCGTTCAAAGAATA
CGATGTGCTGATAGATGAATCCAGTCTTGGTGAGGTGAAGCTTCTCCGAAAACTTGGATAA

Upstream 100 bases:

>100_bases
GAAGATCAGGCTCGTTTTGCGATTGGTTATTACCACCAGCGACAAGATTTTAAAAAATGAAAGATTTCAATAACAGTAAT
GAAAACAAGGGAGAATAATT

Downstream 100 bases:

>100_bases
GCATGTACGATGAATCCGACTTCATAGCGCTTTCGGCATTGCAGCATTTCGTGTATTGCCCCCGGCAGTGTGCGCTAATC
CATATCGAACAGGTATGGGC

Product: CRISPR-associated Csd2 family protein

Products: NA

Alternate protein names: CRISPR-Associated Csd2 Family Protein; CRISPR-Associated Csh2 Family Protein; Csd2 Family CRISPR-Associated Protein; CRISPR-Associated Protein; Crispr-Associated Protein; Cytoplasmic Protein; Crispr-Protein; CRISPR-Associated RAMP Csd3 Family Protein; CRISPR-Associated RAMP Protein Cmr1 Family; CRISPR-Associated Protein Csh2 Family; Cas2 Family CRISPR-Associated Protein; CRISPR-Associated Protein Csd3 Family

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTTVDKRYDFVLLFDVQDGNPNGDPDAGNFPRIDAETGIGLVTDVCLKRKVRNFVQINDVQQPGYDIYVKEKAVLGLAHF
KAFKELGISTGEMSKKVINDQEMIEIFSDLTLPEGVSFAESDEHGVLSIAADADKNEIKDWMKAEKESLSKNVIKVISEA
LKEAKPRKPTAEETSRGKEKMCQDYYDIRTFGAVMSLKSAPNCGQVRGPIQMTFARSVEPIVALEHSITRMAVATEAEAE
KQSGDNRTMGRKYTVPYGLYRAHGFVSANLAHQTGFSENDLDLFWNALLNMFDHDRSAARGLMSTRGLYVFEHSSVLGNA
PASQLFERITVKRKEDSEGPARSFKEYDVLIDESSLGEVKLLRKLG

Sequences:

>Translated_366_residues
MTTVDKRYDFVLLFDVQDGNPNGDPDAGNFPRIDAETGIGLVTDVCLKRKVRNFVQINDVQQPGYDIYVKEKAVLGLAHF
KAFKELGISTGEMSKKVINDQEMIEIFSDLTLPEGVSFAESDEHGVLSIAADADKNEIKDWMKAEKESLSKNVIKVISEA
LKEAKPRKPTAEETSRGKEKMCQDYYDIRTFGAVMSLKSAPNCGQVRGPIQMTFARSVEPIVALEHSITRMAVATEAEAE
KQSGDNRTMGRKYTVPYGLYRAHGFVSANLAHQTGFSENDLDLFWNALLNMFDHDRSAARGLMSTRGLYVFEHSSVLGNA
PASQLFERITVKRKEDSEGPARSFKEYDVLIDESSLGEVKLLRKLG
>Mature_365_residues
TTVDKRYDFVLLFDVQDGNPNGDPDAGNFPRIDAETGIGLVTDVCLKRKVRNFVQINDVQQPGYDIYVKEKAVLGLAHFK
AFKELGISTGEMSKKVINDQEMIEIFSDLTLPEGVSFAESDEHGVLSIAADADKNEIKDWMKAEKESLSKNVIKVISEAL
KEAKPRKPTAEETSRGKEKMCQDYYDIRTFGAVMSLKSAPNCGQVRGPIQMTFARSVEPIVALEHSITRMAVATEAEAEK
QSGDNRTMGRKYTVPYGLYRAHGFVSANLAHQTGFSENDLDLFWNALLNMFDHDRSAARGLMSTRGLYVFEHSSVLGNAP
ASQLFERITVKRKEDSEGPARSFKEYDVLIDESSLGEVKLLRKLG

Specific function: Unknown

COG id: COG3649

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40793; Mature: 40661

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVDKRYDFVLLFDVQDGNPNGDPDAGNFPRIDAETGIGLVTDVCLKRKVRNFVQINDV
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCC
QQPGYDIYVKEKAVLGLAHFKAFKELGISTGEMSKKVINDQEMIEIFSDLTLPEGVSFAE
CCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCC
SDEHGVLSIAADADKNEIKDWMKAEKESLSKNVIKVISEALKEAKPRKPTAEETSRGKEK
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
MCQDYYDIRTFGAVMSLKSAPNCGQVRGPIQMTFARSVEPIVALEHSITRMAVATEAEAE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KQSGDNRTMGRKYTVPYGLYRAHGFVSANLAHQTGFSENDLDLFWNALLNMFDHDRSAAR
HHCCCCCCCCCEECCCCHHHHHCCCEEECHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHH
GLMSTRGLYVFEHSSVLGNAPASQLFERITVKRKEDSEGPARSFKEYDVLIDESSLGEVK
HHHHHCCEEEEECCCHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHEEEECCCCCCHHH
LLRKLG
HHHHCC
>Mature Secondary Structure 
TTVDKRYDFVLLFDVQDGNPNGDPDAGNFPRIDAETGIGLVTDVCLKRKVRNFVQINDV
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCC
QQPGYDIYVKEKAVLGLAHFKAFKELGISTGEMSKKVINDQEMIEIFSDLTLPEGVSFAE
CCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCC
SDEHGVLSIAADADKNEIKDWMKAEKESLSKNVIKVISEALKEAKPRKPTAEETSRGKEK
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
MCQDYYDIRTFGAVMSLKSAPNCGQVRGPIQMTFARSVEPIVALEHSITRMAVATEAEAE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KQSGDNRTMGRKYTVPYGLYRAHGFVSANLAHQTGFSENDLDLFWNALLNMFDHDRSAAR
HHCCCCCCCCCEECCCCHHHHHCCCEEECHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHH
GLMSTRGLYVFEHSSVLGNAPASQLFERITVKRKEDSEGPARSFKEYDVLIDESSLGEVK
HHHHHCCEEEEECCCHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHEEEECCCCCCHHH
LLRKLG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA