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The map label for this gene is ylbH [H]

Identifier: 119356843

GI number: 119356843

Start: 1156414

End: 1156950

Strand: Reverse

Name: ylbH [H]

Synonym: Cpha266_1016

Alternate gene names: 119356843

Gene position: 1156950-1156414 (Counterclockwise)

Preceding gene: 119356844

Following gene: 119356842

Centisome position: 36.92

GC content: 43.95

Gene sequence:

>537_bases
GTGCAGATTATTGCAGGAAAATATAAGGGGAATAAAATCCGAAGAACCGACACCCTTGCCGTTCGCCCATGCAGCAGCCG
GGTAAAAAAGTCATTGTTTGATACGCTCTCTGCAAGAATGGATTTTGAGGGAAGTATTGTACTCGATCTTTTTGCCGGCT
TCGGTTCTCTTGGATTTGAAGCTCTCAGCAGAGGCTCGGAGTTCGTCTATTTTGTCGATCAGCATACCGATGCCCTCAAA
TCGATGAAATCAACAGCATTGCACCTTGGCGTCACTGACAAGAGCTCTATTGTGAATTCAGATGTAACAGCTTTTCTTGA
TCGCACAACAGAACAGTTCGACCTTGTATTCTGCGATCCGCCCTATACCTGGCCTGACTATGAACTGCTTATTGAAAAGA
TCACCGCCAAAAGTGTCTTGTCTGAAGAAGGCATATTGCTCATCGAGCACAAAACGCATCTGAATTTCAAGCATCTGCCA
TCATACTCTTTTCACAAAGATTACGGCATGACAAGAGTAACTTTTTTTCATCACTGA

Upstream 100 bases:

>100_bases
GCAACTGGCATGGAAAACCACCATCACAGGATGATGCGGAAAAAGCGCTTGCCATTCTTGGCGAAACCGTCTTTGGCGAT
TTTTAAACACAAGAGGCTTT

Downstream 100 bases:

>100_bases
CCCTTGCAAGCCGATGAAACGCAAAGCCATTTATCCGGGAACATTTGATCCGTTTACCAACGGTCACCTTGACGTTCTGG
ATCGTGCACTGAATATCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MQIIAGKYKGNKIRRTDTLAVRPCSSRVKKSLFDTLSARMDFEGSIVLDLFAGFGSLGFEALSRGSEFVYFVDQHTDALK
SMKSTALHLGVTDKSSIVNSDVTAFLDRTTEQFDLVFCDPPYTWPDYELLIEKITAKSVLSEEGILLIEHKTHLNFKHLP
SYSFHKDYGMTRVTFFHH

Sequences:

>Translated_178_residues
MQIIAGKYKGNKIRRTDTLAVRPCSSRVKKSLFDTLSARMDFEGSIVLDLFAGFGSLGFEALSRGSEFVYFVDQHTDALK
SMKSTALHLGVTDKSSIVNSDVTAFLDRTTEQFDLVFCDPPYTWPDYELLIEKITAKSVLSEEGILLIEHKTHLNFKHLP
SYSFHKDYGMTRVTFFHH
>Mature_178_residues
MQIIAGKYKGNKIRRTDTLAVRPCSSRVKKSLFDTLSARMDFEGSIVLDLFAGFGSLGFEALSRGSEFVYFVDQHTDALK
SMKSTALHLGVTDKSSIVNSDVTAFLDRTTEQFDLVFCDPPYTWPDYELLIEKITAKSVLSEEGILLIEHKTHLNFKHLP
SYSFHKDYGMTRVTFFHH

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=177, Percent_Identity=26.5536723163842, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 20223; Mature: 20223

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIIAGKYKGNKIRRTDTLAVRPCSSRVKKSLFDTLSARMDFEGSIVLDLFAGFGSLGFE
CCEEECCCCCCEEEECCCEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCHHHHH
ALSRGSEFVYFVDQHTDALKSMKSTALHLGVTDKSSIVNSDVTAFLDRTTEQFDLVFCDP
HHCCCCEEEEEEECCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECC
PYTWPDYELLIEKITAKSVLSEEGILLIEHKTHLNFKHLPSYSFHKDYGMTRVTFFHH
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MQIIAGKYKGNKIRRTDTLAVRPCSSRVKKSLFDTLSARMDFEGSIVLDLFAGFGSLGFE
CCEEECCCCCCEEEECCCEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCHHHHH
ALSRGSEFVYFVDQHTDALKSMKSTALHLGVTDKSSIVNSDVTAFLDRTTEQFDLVFCDP
HHCCCCEEEEEEECCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECC
PYTWPDYELLIEKITAKSVLSEEGILLIEHKTHLNFKHLPSYSFHKDYGMTRVTFFHH
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]