| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is metK
Identifier: 119356750
GI number: 119356750
Start: 1050001
End: 1051215
Strand: Reverse
Name: metK
Synonym: Cpha266_0922
Alternate gene names: 119356750
Gene position: 1051215-1050001 (Counterclockwise)
Preceding gene: 119356751
Following gene: 119356749
Centisome position: 33.54
GC content: 51.6
Gene sequence:
>1215_bases ATGTCACAATCAAGGTATTTTTTTACTTCAGAATCCGTATCGGAAGGGCATCCAGACAAAGTATCCGATCAGATTTCCGA TGCTGTACTTGATGAGTTTATTCGCCAGGATCCGGATTCACGCGTTGCCTGCGAAACGTTCGTCACCACCGGTCAGGTTA TTGTAGGCGGAGAAGTAACGACCAAGGGTGTTGTTGACGTTCAGACAATCGCTCGTAAAGTCATCACCGAAATAGGCTAT ACCAAAGGCGAATACATGTTTGACGCTCATTCATGCGGCGTTCTCTCTGCACTTCACAGCCAGTCGCCGGATATCAACCG TGGCGTTGACCGCAAGGAAGAGATCTCTGACGAACTTGACCGCGTCGGAGCAGGTGACCAGGGTATGATGTTCGGCTATG CATGCACCGAAACGCCTGAACTGATGCCTGCCGCTCTCCAGTTCGCCCAGCAACTTGTCAAGAAGCTTGCTGAAATCCGC AAGGAAGGAAAAATCATGACCTACCTTCGCCCCGACGCCAAAAGCCAGGTTACGCTTGAGTATGTGGACGAACAGGTCAA ACGAGTTGATGCCGTTGTGGTATCAACACAACACGACCCTGAACCTGAAGGCGTCAGCGAAGCCGAGTGGCAGGCAGTCA TCAAAAAAGATATTATCGAGAATGTCATCAACGTCGTTATTCCTGCGGCTCTGCTCGATGAAAAAACAAAACTGCACATC AACCCGACCGGACGTTTTGTCATCGGCGGACCACACGGCGATACCGGCCTGACCGGACGCAAGATCATTGTGGATACCTA TGGCGGCGCAGCGCCCCACGGCGGCGGCGCATTCAGCGGTAAAGATCCGTCGAAAGTCGACCGCAGCGCGGCATATGCTT CGCGTCACGTCGCAAAGAACATTGTTGCAGCGGGACTTGCCGATAAATGTACCGTTCAGGTCTCCTATGCAATCGGCGTT GCCCAGCCCGTTTCGATCTATATCAATACCCACGGCACAGCAAAACATGGACTCACCGATGCAGAAATTCAGGAAAAGGC CGAAGTTATCTTCGATCTTCGTCCTGCATCGATCATCAAGCGTTTCGGCCTCAACAAACCTGAAGGCTGGTGCTACCAGG AAACCGCAGCCTATGGCCATTTCGGCCGTGAAAACTTCCCGTGGGAAAGAACCGAAAAAGTTGAAGAGCTGAAAAAAGCC CTAAATGTAGCCTAA
Upstream 100 bases:
>100_bases TTTCATGCATCATCCTCCAGCGAAAAATCTTTCTTCTTAACCCCAGGTTTTTTTTCCTGTTGATTCTTGTTGTTCGTTTA ACCAAAACTTGTTGAAAAAA
Downstream 100 bases:
>100_bases AAACAATCAGAGAACCTCTGTTTATTACCGGCAAGCGACTGGCGGAGTACCGACCCGTCTGAAAATCGAGCATGTAATAA AGAGAGGTTCCCGTTCCTCT
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MSQSRYFFTSESVSEGHPDKVSDQISDAVLDEFIRQDPDSRVACETFVTTGQVIVGGEVTTKGVVDVQTIARKVITEIGY TKGEYMFDAHSCGVLSALHSQSPDINRGVDRKEEISDELDRVGAGDQGMMFGYACTETPELMPAALQFAQQLVKKLAEIR KEGKIMTYLRPDAKSQVTLEYVDEQVKRVDAVVVSTQHDPEPEGVSEAEWQAVIKKDIIENVINVVIPAALLDEKTKLHI NPTGRFVIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYASRHVAKNIVAAGLADKCTVQVSYAIGV AQPVSIYINTHGTAKHGLTDAEIQEKAEVIFDLRPASIIKRFGLNKPEGWCYQETAAYGHFGRENFPWERTEKVEELKKA LNVA
Sequences:
>Translated_404_residues MSQSRYFFTSESVSEGHPDKVSDQISDAVLDEFIRQDPDSRVACETFVTTGQVIVGGEVTTKGVVDVQTIARKVITEIGY TKGEYMFDAHSCGVLSALHSQSPDINRGVDRKEEISDELDRVGAGDQGMMFGYACTETPELMPAALQFAQQLVKKLAEIR KEGKIMTYLRPDAKSQVTLEYVDEQVKRVDAVVVSTQHDPEPEGVSEAEWQAVIKKDIIENVINVVIPAALLDEKTKLHI NPTGRFVIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYASRHVAKNIVAAGLADKCTVQVSYAIGV AQPVSIYINTHGTAKHGLTDAEIQEKAEVIFDLRPASIIKRFGLNKPEGWCYQETAAYGHFGRENFPWERTEKVEELKKA LNVA >Mature_403_residues SQSRYFFTSESVSEGHPDKVSDQISDAVLDEFIRQDPDSRVACETFVTTGQVIVGGEVTTKGVVDVQTIARKVITEIGYT KGEYMFDAHSCGVLSALHSQSPDINRGVDRKEEISDELDRVGAGDQGMMFGYACTETPELMPAALQFAQQLVKKLAEIRK EGKIMTYLRPDAKSQVTLEYVDEQVKRVDAVVVSTQHDPEPEGVSEAEWQAVIKKDIIENVINVVIPAALLDEKTKLHIN PTGRFVIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYASRHVAKNIVAAGLADKCTVQVSYAIGVA QPVSIYINTHGTAKHGLTDAEIQEKAEVIFDLRPASIIKRFGLNKPEGWCYQETAAYGHFGRENFPWERTEKVEELKKAL NVA
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family
Homologues:
Organism=Homo sapiens, GI5174529, Length=401, Percent_Identity=51.8703241895262, Blast_Score=377, Evalue=1e-104, Organism=Homo sapiens, GI4557737, Length=400, Percent_Identity=51.25, Blast_Score=371, Evalue=1e-103, Organism=Escherichia coli, GI1789311, Length=397, Percent_Identity=58.4382871536524, Blast_Score=459, Evalue=1e-130, Organism=Caenorhabditis elegans, GI17538494, Length=407, Percent_Identity=53.0712530712531, Blast_Score=389, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17538498, Length=399, Percent_Identity=52.6315789473684, Blast_Score=388, Evalue=1e-108, Organism=Caenorhabditis elegans, GI25145633, Length=399, Percent_Identity=52.8822055137845, Blast_Score=387, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17551082, Length=396, Percent_Identity=51.7676767676768, Blast_Score=375, Evalue=1e-104, Organism=Caenorhabditis elegans, GI32565905, Length=407, Percent_Identity=48.4029484029484, Blast_Score=329, Evalue=1e-90, Organism=Caenorhabditis elegans, GI32565911, Length=348, Percent_Identity=50.5747126436782, Blast_Score=316, Evalue=1e-86, Organism=Caenorhabditis elegans, GI25145635, Length=348, Percent_Identity=50.8620689655172, Blast_Score=313, Evalue=7e-86, Organism=Caenorhabditis elegans, GI32565903, Length=329, Percent_Identity=51.063829787234, Blast_Score=284, Evalue=5e-77, Organism=Caenorhabditis elegans, GI32565909, Length=80, Percent_Identity=61.25, Blast_Score=111, Evalue=6e-25, Organism=Caenorhabditis elegans, GI32565907, Length=50, Percent_Identity=64, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320710, Length=400, Percent_Identity=51.75, Blast_Score=375, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6323209, Length=394, Percent_Identity=50.761421319797, Blast_Score=367, Evalue=1e-102, Organism=Drosophila melanogaster, GI45552159, Length=396, Percent_Identity=50.7575757575758, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI24580529, Length=396, Percent_Identity=50.7575757575758, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI24580537, Length=396, Percent_Identity=50.7575757575758, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI24580533, Length=396, Percent_Identity=50.7575757575758, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI24580535, Length=396, Percent_Identity=50.7575757575758, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI24580531, Length=396, Percent_Identity=50.7575757575758, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI24580527, Length=394, Percent_Identity=50.253807106599, Blast_Score=348, Evalue=4e-96, Organism=Drosophila melanogaster, GI24580525, Length=394, Percent_Identity=50.253807106599, Blast_Score=348, Evalue=4e-96, Organism=Drosophila melanogaster, GI24580541, Length=381, Percent_Identity=49.3438320209974, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI24580539, Length=122, Percent_Identity=49.1803278688525, Blast_Score=124, Evalue=9e-29,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): METK_CHLPD (A1BEZ3)
Other databases:
- EMBL: CP000492 - RefSeq: YP_911394.1 - ProteinModelPortal: A1BEZ3 - SMR: A1BEZ3 - STRING: A1BEZ3 - GeneID: 4570613 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_0922 - NMPDR: fig|290317.7.peg.979 - eggNOG: COG0192 - HOGENOM: HBG443662 - OMA: IYYAHRL - ProtClustDB: PRK05250 - GO: GO:0005737 - HAMAP: MF_00086 - InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 - PANTHER: PTHR11964 - PIRSF: PIRSF000497 - TIGRFAMs: TIGR01034
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N; SSF55973 S-AdoMet_synt
EC number: =2.5.1.6
Molecular weight: Translated: 44081; Mature: 43950
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00376 ADOMET_SYNTHASE_1; PS00377 ADOMET_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSRYFFTSESVSEGHPDKVSDQISDAVLDEFIRQDPDSRVACETFVTTGQVIVGGEVT CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCEEECCCCC TKGVVDVQTIARKVITEIGYTKGEYMFDAHSCGVLSALHSQSPDINRGVDRKEEISDELD CCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH RVGAGDQGMMFGYACTETPELMPAALQFAQQLVKKLAEIRKEGKIMTYLRPDAKSQVTLE HCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHH YVDEQVKRVDAVVVSTQHDPEPEGVSEAEWQAVIKKDIIENVINVVIPAALLDEKTKLHI HHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE NPTGRFVIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYASRHVAKN CCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH IVAAGLADKCTVQVSYAIGVAQPVSIYINTHGTAKHGLTDAEIQEKAEVIFDLRPASIIK HHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCHHCCCCHHHHHHHHHHHHCCCHHHHHH RFGLNKPEGWCYQETAAYGHFGRENFPWERTEKVEELKKALNVA HHCCCCCCCCEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SQSRYFFTSESVSEGHPDKVSDQISDAVLDEFIRQDPDSRVACETFVTTGQVIVGGEVT CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCEEECCCCC TKGVVDVQTIARKVITEIGYTKGEYMFDAHSCGVLSALHSQSPDINRGVDRKEEISDELD CCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH RVGAGDQGMMFGYACTETPELMPAALQFAQQLVKKLAEIRKEGKIMTYLRPDAKSQVTLE HCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHH YVDEQVKRVDAVVVSTQHDPEPEGVSEAEWQAVIKKDIIENVINVVIPAALLDEKTKLHI HHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE NPTGRFVIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYASRHVAKN CCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH IVAAGLADKCTVQVSYAIGVAQPVSIYINTHGTAKHGLTDAEIQEKAEVIFDLRPASIIK HHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCHHCCCCHHHHHHHHHHHHCCCHHHHHH RFGLNKPEGWCYQETAAYGHFGRENFPWERTEKVEELKKALNVA HHCCCCCCCCEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA