| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is glmU [H]
Identifier: 119356751
GI number: 119356751
Start: 1051458
End: 1052435
Strand: Reverse
Name: glmU [H]
Synonym: Cpha266_0923
Alternate gene names: 119356751
Gene position: 1052435-1051458 (Counterclockwise)
Preceding gene: 119356757
Following gene: 119356750
Centisome position: 33.58
GC content: 47.85
Gene sequence:
>978_bases ATGAAAGCCATCATTCCTGTTGCAGGCGTTGGAACCCGTCTGCGTCCTCACACCTACTCGCACCCGAAAGTTCTTTTAAA TGTTGCCGGCAAACCGATCATCGGCCACATCATGGACAAGCTTATTGATGCCGGAATCGATGAAGCTATTGTCATTGTAG GTTATCTCGGCAGTATGGTCGAAGATTGGCTGCGCAAACACTACACCATAAAGTTCACCTTTGTCGATCAGACTGAAATG CTTGGTCTTGCCCATGCGGTCTGGATGTGTAAAGACCATGTCGATAAAACCGATCCCCTGCTTATCATTCTTGGCGACAC GGTTTTCGATGTCGATCTTTCCCCCGTGCTTCAGAGCCCCTGCTCAACGCTGGGAGTCAAGGAGGTCGAAGACCCTCGAC GGTTCGGAGTGGCGGTGATGGAAGAAAACCGCATTAAAAAACTTGTTGAAAAACCTGATACGCCTGTAAGCAATCTGGCC ATTGTCGGCCTCTATTTTCTTTACAAGGCGCAGCCGCTTTTTGAGTGCATCGATCACCTGATCAGCAATGAGATAAAAAC CAAAGGAGAGTACCAGCTTACCGATGCGCTCCAACTCATGATTGAACGGGGTGAACCGTTTACAACATTTCCTGTTGAAG GGTGGTATGATTGCGGCAAACCTGAAACGCTTCTCTCTACCAACGAAATTCTCCTGCAGAAAACAGTGTCAGGAAAAACG TTTCCAGGATGCATCATCAACGAACCCGTATTCATAGCCGACAGCGCCACGCTTGAAAATGCCATTATCGGACCAAACAC ATCCGTCGCTGAACATGCCGTCATAACTGATGCCGTCGTAAAAAACTCCATTATCGGCAGTGAGGCCCAGGTAACCGGTG TAATGCTCACCCAATCGATTGTAGGCAACAACGCATCCATTAACGGGTCCTTCCATAAAATCAATATCGGCGATTACTCG GAAATAATGATTGGATAA
Upstream 100 bases:
>100_bases TGCAAGAAAGAGAGTCATGAATCACTAAATTTCCTTCAGCGCAAGAAGAGAAAAAAAATGCGTGACCCGGGCACCTTACA ATCTAACCCGACAGACCATT
Downstream 100 bases:
>100_bases CACGCTCTTGCAAGTCAGCGGACGAATGCTTACATTTTAGCTTTATTTTTGTTCGGCATCCCCATTACCTATGGACACGG TGCCCCGGACTCAGAAATAA
Product: nucleotidyl transferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase [H]
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MKAIIPVAGVGTRLRPHTYSHPKVLLNVAGKPIIGHIMDKLIDAGIDEAIVIVGYLGSMVEDWLRKHYTIKFTFVDQTEM LGLAHAVWMCKDHVDKTDPLLIILGDTVFDVDLSPVLQSPCSTLGVKEVEDPRRFGVAVMEENRIKKLVEKPDTPVSNLA IVGLYFLYKAQPLFECIDHLISNEIKTKGEYQLTDALQLMIERGEPFTTFPVEGWYDCGKPETLLSTNEILLQKTVSGKT FPGCIINEPVFIADSATLENAIIGPNTSVAEHAVITDAVVKNSIIGSEAQVTGVMLTQSIVGNNASINGSFHKINIGDYS EIMIG
Sequences:
>Translated_325_residues MKAIIPVAGVGTRLRPHTYSHPKVLLNVAGKPIIGHIMDKLIDAGIDEAIVIVGYLGSMVEDWLRKHYTIKFTFVDQTEM LGLAHAVWMCKDHVDKTDPLLIILGDTVFDVDLSPVLQSPCSTLGVKEVEDPRRFGVAVMEENRIKKLVEKPDTPVSNLA IVGLYFLYKAQPLFECIDHLISNEIKTKGEYQLTDALQLMIERGEPFTTFPVEGWYDCGKPETLLSTNEILLQKTVSGKT FPGCIINEPVFIADSATLENAIIGPNTSVAEHAVITDAVVKNSIIGSEAQVTGVMLTQSIVGNNASINGSFHKINIGDYS EIMIG >Mature_325_residues MKAIIPVAGVGTRLRPHTYSHPKVLLNVAGKPIIGHIMDKLIDAGIDEAIVIVGYLGSMVEDWLRKHYTIKFTFVDQTEM LGLAHAVWMCKDHVDKTDPLLIILGDTVFDVDLSPVLQSPCSTLGVKEVEDPRRFGVAVMEENRIKKLVEKPDTPVSNLA IVGLYFLYKAQPLFECIDHLISNEIKTKGEYQLTDALQLMIERGEPFTTFPVEGWYDCGKPETLLSTNEILLQKTVSGKT FPGCIINEPVFIADSATLENAIIGPNTSVAEHAVITDAVVKNSIIGSEAQVTGVMLTQSIVGNNASINGSFHKINIGDYS EIMIG
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetyl-glucosamine (UDP- GlcNAc). Responsible for the acetylation of GlcN-1-P to GlcNAc-1- P, and for the uridyl transfer from UTP to GlcNAc-1-P, to produce UDP-GlcN
COG id: COG1209
COG function: function code M; dTDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761619, Length=327, Percent_Identity=28.1345565749235, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI11761621, Length=326, Percent_Identity=28.2208588957055, Blast_Score=116, Evalue=4e-26, Organism=Escherichia coli, GI1790224, Length=242, Percent_Identity=30.5785123966942, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787488, Length=266, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788351, Length=247, Percent_Identity=27.5303643724696, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1788355, Length=268, Percent_Identity=25, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790168, Length=318, Percent_Identity=24.8427672955975, Blast_Score=68, Evalue=9e-13, Organism=Caenorhabditis elegans, GI133931050, Length=344, Percent_Identity=27.0348837209302, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17509979, Length=339, Percent_Identity=28.023598820059, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17509981, Length=326, Percent_Identity=27.6073619631902, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320148, Length=331, Percent_Identity=27.7945619335347, Blast_Score=100, Evalue=2e-22, Organism=Drosophila melanogaster, GI21355443, Length=330, Percent_Identity=28.1818181818182, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI24644084, Length=330, Percent_Identity=28.1818181818182, Blast_Score=111, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.23; =2.3.1.157 [H]
Molecular weight: Translated: 35618; Mature: 35618
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIIPVAGVGTRLRPHTYSHPKVLLNVAGKPIIGHIMDKLIDAGIDEAIVIVGYLGSMV CCCEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH EDWLRKHYTIKFTFVDQTEMLGLAHAVWMCKDHVDKTDPLLIILGDTVFDVDLSPVLQSP HHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCHHHHHCH CSTLGVKEVEDPRRFGVAVMEENRIKKLVEKPDTPVSNLAIVGLYFLYKAQPLFECIDHL HHHCCCCCCCCHHHHCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH ISNEIKTKGEYQLTDALQLMIERGEPFTTFPVEGWYDCGKPETLLSTNEILLQKTVSGKT HHHHHCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCHHHEEEECCCCC FPGCIINEPVFIADSATLENAIIGPNTSVAEHAVITDAVVKNSIIGSEAQVTGVMLTQSI CCCEEECCCEEEECCCHHCCCEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHEEEHHH VGNNASINGSFHKINIGDYSEIMIG HCCCCEECCCEEEEECCCCHHEECC >Mature Secondary Structure MKAIIPVAGVGTRLRPHTYSHPKVLLNVAGKPIIGHIMDKLIDAGIDEAIVIVGYLGSMV CCCEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH EDWLRKHYTIKFTFVDQTEMLGLAHAVWMCKDHVDKTDPLLIILGDTVFDVDLSPVLQSP HHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCHHHHHCH CSTLGVKEVEDPRRFGVAVMEENRIKKLVEKPDTPVSNLAIVGLYFLYKAQPLFECIDHL HHHCCCCCCCCHHHHCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH ISNEIKTKGEYQLTDALQLMIERGEPFTTFPVEGWYDCGKPETLLSTNEILLQKTVSGKT HHHHHCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCHHHEEEECCCCC FPGCIINEPVFIADSATLENAIIGPNTSVAEHAVITDAVVKNSIIGSEAQVTGVMLTQSI CCCEEECCCEEEECCCHHCCCEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHEEEHHH VGNNASINGSFHKINIGDYSEIMIG HCCCCEECCCEEEEECCCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]