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The map label for this gene is omp16 [H]

Identifier: 119356692

GI number: 119356692

Start: 985420

End: 985908

Strand: Direct

Name: omp16 [H]

Synonym: Cpha266_0861

Alternate gene names: 119356692

Gene position: 985420-985908 (Clockwise)

Preceding gene: 119356691

Following gene: 119356693

Centisome position: 31.44

GC content: 48.67

Gene sequence:

>489_bases
ATGTTTAGCCTGATGGTTACCGCCGGGTGTTCATCCAAAAATGCAGTTAACACCCAGGATGGTAATGCAGGGCTATCATC
AGGCCAGTCTGGATGGGGTACGACATCTTCTTCGGTTGCCCAGTCGCCATCCGGCTATGGTTTCGATGAATGGCAGAAAG
GTCCGCTTGGCGATGTATTTTATGATTTTGACAGTTCTCTACTGAGTTCAGAAGCTCAGGAGCAGTTGACGCGGAATTCC
GGATGGATGAAGAGTAATGTGCAGGCCGCAATCATCATTCAGGGGCATTGTGACGACAGAGGTACCTCTGAGTACAATCT
TGCGCTTGGAGACCGCAGAGCAGTCAGCGCGCGCGAGTTTCTGATTCGAACAGGCATTGCTTCATCTCGTATTGAAACGA
TTACTTTTGGGGAAGAACGTCCTTTTTCTACTTCGCAGAGCGAAGAGGGTCTGGCTAAAAATCGCAGAGCTCATTTTGTG
ATAAAATGA

Upstream 100 bases:

>100_bases
CTTTTTGGCACAACGAAGGGGCAGACAGCAATGTGTGCCCCTTTTTTATTCATTATAGCAAACTATTGATACTATGAACA
GCAGTATTAAGGGTGTCATT

Downstream 100 bases:

>100_bases
TTTCTCCTGCGTGTGTCTACAGTTTTTCTGATTGAGACGGTTAATGAAACGTTGAAAAAACGATAGAGAATCATGAAGAA
ATCCATCCGATTATTACTGT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MFSLMVTAGCSSKNAVNTQDGNAGLSSGQSGWGTTSSSVAQSPSGYGFDEWQKGPLGDVFYDFDSSLLSSEAQEQLTRNS
GWMKSNVQAAIIIQGHCDDRGTSEYNLALGDRRAVSAREFLIRTGIASSRIETITFGEERPFSTSQSEEGLAKNRRAHFV
IK

Sequences:

>Translated_162_residues
MFSLMVTAGCSSKNAVNTQDGNAGLSSGQSGWGTTSSSVAQSPSGYGFDEWQKGPLGDVFYDFDSSLLSSEAQEQLTRNS
GWMKSNVQAAIIIQGHCDDRGTSEYNLALGDRRAVSAREFLIRTGIASSRIETITFGEERPFSTSQSEEGLAKNRRAHFV
IK
>Mature_162_residues
MFSLMVTAGCSSKNAVNTQDGNAGLSSGQSGWGTTSSSVAQSPSGYGFDEWQKGPLGDVFYDFDSSLLSSEAQEQLTRNS
GWMKSNVQAAIIIQGHCDDRGTSEYNLALGDRRAVSAREFLIRTGIASSRIETITFGEERPFSTSQSEEGLAKNRRAHFV
IK

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=161, Percent_Identity=30.4347826086957, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17501; Mature: 17501

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLMVTAGCSSKNAVNTQDGNAGLSSGQSGWGTTSSSVAQSPSGYGFDEWQKGPLGDVF
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEE
YDFDSSLLSSEAQEQLTRNSGWMKSNVQAAIIIQGHCDDRGTSEYNLALGDRRAVSAREF
ECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHH
LIRTGIASSRIETITFGEERPFSTSQSEEGLAKNRRAHFVIK
HHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCEEEEEC
>Mature Secondary Structure
MFSLMVTAGCSSKNAVNTQDGNAGLSSGQSGWGTTSSSVAQSPSGYGFDEWQKGPLGDVF
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEE
YDFDSSLLSSEAQEQLTRNSGWMKSNVQAAIIIQGHCDDRGTSEYNLALGDRRAVSAREF
ECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHH
LIRTGIASSRIETITFGEERPFSTSQSEEGLAKNRRAHFVIK
HHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]