Click here to switch to the map view.

The map label for this gene is omp16 [H]

Identifier: 119356691

GI number: 119356691

Start: 984851

End: 985309

Strand: Direct

Name: omp16 [H]

Synonym: Cpha266_0860

Alternate gene names: 119356691

Gene position: 984851-985309 (Clockwise)

Preceding gene: 119356690

Following gene: 119356692

Centisome position: 31.43

GC content: 46.62

Gene sequence:

>459_bases
ATGAGAACTGTAAAACCTTTACTTAAAAGCATTTTTATTCCGGGCATGCTTTTTCTTGGAGCCTGTTGCTGTGAAAAGGA
TGTCGTTGTTGCGCCACCACCACCACCACCGCCACCTGTAGTAGTAGAACCTGGTCTTGGTGATGTGTTCTACGATTACG
ATAAATCAGAATTGCGCATGGATGCTGTCGAACAGCTCAAGACAAATGCTGCATGGATGCAGAGAAATGCTGCAAGTTCA
GTTGTTATTGAGGGTCATTGCGATGAGAGAGGTACCAACGAATACAACCTTGCGCTTGGCGAACGCAGAGCAAACAGTGC
AAAAGATTACATCGTTAATCTTGGTGTCGATGGTGCTCGCATGAAGACCGTCAGCTACGGTGAAGAGCGTCCGTTTGCTC
TTGGACATGATGAAGCATCCTGGGCACAGAACCGCAGAGCTCATTTTGTAGGACAATAA

Upstream 100 bases:

>100_bases
TCAGAAACGTTTATTACAAATGGACGGTGAACAGATGCAACCATCCTGGTCTTTATTTCGTTAGTAGTATTCTTAGTAAT
AACCATAAAAAGGGGGAATC

Downstream 100 bases:

>100_bases
GGTGAATTGCCTTTTTGGCACAACGAAGGGGCAGACAGCAATGTGTGCCCCTTTTTTATTCATTATAGCAAACTATTGAT
ACTATGAACAGCAGTATTAA

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MRTVKPLLKSIFIPGMLFLGACCCEKDVVVAPPPPPPPPVVVEPGLGDVFYDYDKSELRMDAVEQLKTNAAWMQRNAASS
VVIEGHCDERGTNEYNLALGERRANSAKDYIVNLGVDGARMKTVSYGEERPFALGHDEASWAQNRRAHFVGQ

Sequences:

>Translated_152_residues
MRTVKPLLKSIFIPGMLFLGACCCEKDVVVAPPPPPPPPVVVEPGLGDVFYDYDKSELRMDAVEQLKTNAAWMQRNAASS
VVIEGHCDERGTNEYNLALGERRANSAKDYIVNLGVDGARMKTVSYGEERPFALGHDEASWAQNRRAHFVGQ
>Mature_152_residues
MRTVKPLLKSIFIPGMLFLGACCCEKDVVVAPPPPPPPPVVVEPGLGDVFYDYDKSELRMDAVEQLKTNAAWMQRNAASS
VVIEGHCDERGTNEYNLALGERRANSAKDYIVNLGVDGARMKTVSYGEERPFALGHDEASWAQNRRAHFVGQ

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=102, Percent_Identity=48.0392156862745, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 16763; Mature: 16763

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVKPLLKSIFIPGMLFLGACCCEKDVVVAPPPPPPPPVVVEPGLGDVFYDYDKSELRM
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCEEECCCHHHHHH
DAVEQLKTNAAWMQRNAASSVVIEGHCDERGTNEYNLALGERRANSAKDYIVNLGVDGAR
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCE
MKTVSYGEERPFALGHDEASWAQNRRAHFVGQ
EEEECCCCCCCEEECCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MRTVKPLLKSIFIPGMLFLGACCCEKDVVVAPPPPPPPPVVVEPGLGDVFYDYDKSELRM
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCEEECCCHHHHHH
DAVEQLKTNAAWMQRNAASSVVIEGHCDERGTNEYNLALGERRANSAKDYIVNLGVDGAR
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCE
MKTVSYGEERPFALGHDEASWAQNRRAHFVGQ
EEEECCCCCCCEEECCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]