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The map label for this gene is ybgF [C]

Identifier: 119356693

GI number: 119356693

Start: 985981

End: 986751

Strand: Direct

Name: ybgF [C]

Synonym: Cpha266_0862

Alternate gene names: 119356693

Gene position: 985981-986751 (Clockwise)

Preceding gene: 119356692

Following gene: 119356701

Centisome position: 31.46

GC content: 42.54

Gene sequence:

>771_bases
ATGAAGAAATCCATCCGATTATTACTGTTTTTACCGACGATTGTGCTTGCCGGGTGTGCTTCGAAGTCAGATCTTGTTCT
TGTTGCTGATGATATCAATAAGCTGAAAACCGAGTCTGAAACCATAAAATCTCAATCTGCGGTCACCTATGCAGATATTC
AGCAGGTTCGGGACGAAATAGCCCGTCAGCAGGGGAGAGTTGAGGAAATAGCACACAACAATGAACAGAAGTTTGGCCGG
CTTGGACTTGAAGATTCACTTCTTGTACATAAAGTCGATGAACTTGACAGCAGACTTTTACGTATTGAACAGAAGCTTGG
TCTGGTTGCTGAAAGACCGGGTATTGAAAAGGCAACGTTATCAGCTAAAGAAAGCCAGGTGCAGCCGGTTTCTCCCTTGG
CATCAGTAATGACTGATAAGGCGCTTCTTGATGACGGGATAAAAAAGCTTGCGTCAAACAATGCTTCCGGAGCCAGGGGA
AGTTTTTCATTGCTGATGAAAAACTATCCTAAATCAGAACTGGTCGATGACGCACAGTTCTATGTTGCGGAAAGTTATCT
CAGTGAGAAGTGGTATGAAAAAGCTGTACTTGAATATCAGGTTGTAATTGCCAAATATACAAAAAGCAATAAACGGGCTG
TTGCTTTATATAAGCAAGGCTTGGCTTTTGAGCTTCTTGGAGATGCAGTCAACGCTAAAGCGAGATTCAGGGATGTTATC
AATATCTATCCTGCCTCAGCAGAAGCGAAACTTGCAAAACAAAAGCTTTAA

Upstream 100 bases:

>100_bases
TCGCAGAGCTCATTTTGTGATAAAATGATTTCTCCTGCGTGTGTCTACAGTTTTTCTGATTGAGACGGTTAATGAAACGT
TGAAAAAACGATAGAGAATC

Downstream 100 bases:

>100_bases
AGAAAATGCCAGGTTACAAACAACTTGGCATTTTCTTTAAAAAGCTTTTAATCGATCCTTTCTTACTTGAAAAATTCGTT
AAGAGTATAGGTTCGTCGAT

Product: membrane lipoprotein lipid attachment site

Products: NA

Alternate protein names: TPR Domain-Containing Protein; TPR Repeat-Containing Protein; TPR Domain Protein; Outer Membrane Protein; Tetratricopeptide Repeat Family Protein; L System Periplasmic Component; Tetratricopeptide Domain-Containing Protein; L-Pal System YbgF; Aspartyl/Asparaginyl Beta-Hydroxylase; Membrane Lipoprotein Lipid Attachment Site

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKKSIRLLLFLPTIVLAGCASKSDLVLVADDINKLKTESETIKSQSAVTYADIQQVRDEIARQQGRVEEIAHNNEQKFGR
LGLEDSLLVHKVDELDSRLLRIEQKLGLVAERPGIEKATLSAKESQVQPVSPLASVMTDKALLDDGIKKLASNNASGARG
SFSLLMKNYPKSELVDDAQFYVAESYLSEKWYEKAVLEYQVVIAKYTKSNKRAVALYKQGLAFELLGDAVNAKARFRDVI
NIYPASAEAKLAKQKL

Sequences:

>Translated_256_residues
MKKSIRLLLFLPTIVLAGCASKSDLVLVADDINKLKTESETIKSQSAVTYADIQQVRDEIARQQGRVEEIAHNNEQKFGR
LGLEDSLLVHKVDELDSRLLRIEQKLGLVAERPGIEKATLSAKESQVQPVSPLASVMTDKALLDDGIKKLASNNASGARG
SFSLLMKNYPKSELVDDAQFYVAESYLSEKWYEKAVLEYQVVIAKYTKSNKRAVALYKQGLAFELLGDAVNAKARFRDVI
NIYPASAEAKLAKQKL
>Mature_256_residues
MKKSIRLLLFLPTIVLAGCASKSDLVLVADDINKLKTESETIKSQSAVTYADIQQVRDEIARQQGRVEEIAHNNEQKFGR
LGLEDSLLVHKVDELDSRLLRIEQKLGLVAERPGIEKATLSAKESQVQPVSPLASVMTDKALLDDGIKKLASNNASGARG
SFSLLMKNYPKSELVDDAQFYVAESYLSEKWYEKAVLEYQVVIAKYTKSNKRAVALYKQGLAFELLGDAVNAKARFRDVI
NIYPASAEAKLAKQKL

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28402; Mature: 28402

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSIRLLLFLPTIVLAGCASKSDLVLVADDINKLKTESETIKSQSAVTYADIQQVRDEI
CCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ARQQGRVEEIAHNNEQKFGRLGLEDSLLVHKVDELDSRLLRIEQKLGLVAERPGIEKATL
HHHCCHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHH
SAKESQVQPVSPLASVMTDKALLDDGIKKLASNNASGARGSFSLLMKNYPKSELVDDAQF
CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
YVAESYLSEKWYEKAVLEYQVVIAKYTKSNKRAVALYKQGLAFELLGDAVNAKARFRDVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHH
NIYPASAEAKLAKQKL
HHCCCCHHHHHHHHCC
>Mature Secondary Structure
MKKSIRLLLFLPTIVLAGCASKSDLVLVADDINKLKTESETIKSQSAVTYADIQQVRDEI
CCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ARQQGRVEEIAHNNEQKFGRLGLEDSLLVHKVDELDSRLLRIEQKLGLVAERPGIEKATL
HHHCCHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHH
SAKESQVQPVSPLASVMTDKALLDDGIKKLASNNASGARGSFSLLMKNYPKSELVDDAQF
CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
YVAESYLSEKWYEKAVLEYQVVIAKYTKSNKRAVALYKQGLAFELLGDAVNAKARFRDVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHH
NIYPASAEAKLAKQKL
HHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA