| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is punA [H]
Identifier: 119356537
GI number: 119356537
Start: 802880
End: 803701
Strand: Reverse
Name: punA [H]
Synonym: Cpha266_0702
Alternate gene names: 119356537
Gene position: 803701-802880 (Counterclockwise)
Preceding gene: 119356538
Following gene: 119356536
Centisome position: 25.65
GC content: 50.73
Gene sequence:
>822_bases ATGATTGCTCAACAGGCTAAAATCCAGGAAGCTGTTACCTTTATCAGAAAAAAAACACAGACTGACTACCCGATCGGCAT TGTTCTGGGCACAGGCCTCGGTGCTCTTGCAAAAGAGATCGAAGTCGACTTTTCGCTTGATTACGCTGATATCCCGAACT TTCCTATCTCAACGGTTGAAACCCATCACGGCAAACTGATCTTCGGCACGCTTGCCGGTAAAAAAGTAGTTGCGATGCAG GGCCGTTTCCATTTCTATGAAGGGTACTCCATGCAGCAGATCGTGTTCCCGATTCGGGTCATGAAACACCTCGGCATTAC CACCCTCGGCATCACCAATGCCTGCGGAGGCCTTAATCCTTCCTATAAAAAAGGGGATATCATGCTGATTGACGATCACA TCAACCTGTTAGGCAGCAATCCTCTGATCGGACCCAATAACCCCGAAACAGGATCAAGGTTCCCTGACATGTGCGAACCA TACTCAAACCGAATCCTCGCCCTTGCCGAACAAGCGGCTCTCGACAACGGCATAAAGGTGCAGCGCGGTGTTTATATAGC ACTTTCCGGCCCCTGCCTTGAAACACGTGCCGAATATCGCATGCTGCGACTGCTCGGAGCCGATGTTGTCGGCATGTCGA CCGTTCCGGAGGTTATTGCCGCTGTGCATCAGGGAACCGAAGTGTTCGGCATGTCCATCGTTACCGACGAATGCTTCCCT GACTGCCTGATGCCCGTCAGCATTGAGGAGATTATTGAGGTTTCCAACCATGCAGAACCCAAAATGACCGCCATCTTCAA AGCCGTTGTCTCAAACCTCTAA
Upstream 100 bases:
>100_bases ACTTTTTTACTGTTTCTCTGCCTGATCAACAAGAACATCGGGCATTGATGAATCAAGAAAAACCGGGATATCTTTCATTC AACCAATAAACCATGGCATC
Downstream 100 bases:
>100_bases CCCGATCAACATCATTTGACCCATGATAGATGCCATTTCGTTCAATGAGGGTACGCTCCGCTACCTCGATCAGCGTTACC TTCCGCTCCGTGAAGAGCAT
Product: purine nucleoside phosphorylase
Products: NA
Alternate protein names: Inosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; PU-NPase I [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MIAQQAKIQEAVTFIRKKTQTDYPIGIVLGTGLGALAKEIEVDFSLDYADIPNFPISTVETHHGKLIFGTLAGKKVVAMQ GRFHFYEGYSMQQIVFPIRVMKHLGITTLGITNACGGLNPSYKKGDIMLIDDHINLLGSNPLIGPNNPETGSRFPDMCEP YSNRILALAEQAALDNGIKVQRGVYIALSGPCLETRAEYRMLRLLGADVVGMSTVPEVIAAVHQGTEVFGMSIVTDECFP DCLMPVSIEEIIEVSNHAEPKMTAIFKAVVSNL
Sequences:
>Translated_273_residues MIAQQAKIQEAVTFIRKKTQTDYPIGIVLGTGLGALAKEIEVDFSLDYADIPNFPISTVETHHGKLIFGTLAGKKVVAMQ GRFHFYEGYSMQQIVFPIRVMKHLGITTLGITNACGGLNPSYKKGDIMLIDDHINLLGSNPLIGPNNPETGSRFPDMCEP YSNRILALAEQAALDNGIKVQRGVYIALSGPCLETRAEYRMLRLLGADVVGMSTVPEVIAAVHQGTEVFGMSIVTDECFP DCLMPVSIEEIIEVSNHAEPKMTAIFKAVVSNL >Mature_273_residues MIAQQAKIQEAVTFIRKKTQTDYPIGIVLGTGLGALAKEIEVDFSLDYADIPNFPISTVETHHGKLIFGTLAGKKVVAMQ GRFHFYEGYSMQQIVFPIRVMKHLGITTLGITNACGGLNPSYKKGDIMLIDDHINLLGSNPLIGPNNPETGSRFPDMCEP YSNRILALAEQAALDNGIKVQRGVYIALSGPCLETRAEYRMLRLLGADVVGMSTVPEVIAAVHQGTEVFGMSIVTDECFP DCLMPVSIEEIIEVSNHAEPKMTAIFKAVVSNL
Specific function: Cleavage of guanosine or inosine to respective bases and sugar-1-phosphate molecules [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI157168362, Length=256, Percent_Identity=45.3125, Blast_Score=224, Evalue=7e-59, Organism=Homo sapiens, GI47132622, Length=251, Percent_Identity=28.6852589641434, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1788746, Length=224, Percent_Identity=41.0714285714286, Blast_Score=176, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17541190, Length=268, Percent_Identity=35.8208955223881, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6323238, Length=227, Percent_Identity=43.6123348017621, Blast_Score=181, Evalue=8e-47, Organism=Drosophila melanogaster, GI45552887, Length=238, Percent_Identity=47.8991596638655, Blast_Score=220, Evalue=8e-58, Organism=Drosophila melanogaster, GI24656093, Length=238, Percent_Identity=47.8991596638655, Blast_Score=220, Evalue=8e-58, Organism=Drosophila melanogaster, GI24656090, Length=238, Percent_Identity=47.8991596638655, Blast_Score=220, Evalue=9e-58, Organism=Drosophila melanogaster, GI45552885, Length=238, Percent_Identity=47.8991596638655, Blast_Score=219, Evalue=1e-57, Organism=Drosophila melanogaster, GI24762376, Length=229, Percent_Identity=35.3711790393013, Blast_Score=134, Evalue=9e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011268 - InterPro: IPR000845 - InterPro: IPR011270 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.1 [H]
Molecular weight: Translated: 29741; Mature: 29741
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAQQAKIQEAVTFIRKKTQTDYPIGIVLGTGLGALAKEIEVDFSLDYADIPNFPISTVE CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHEEEEEECCCCCCCCCCCCEE THHGKLIFGTLAGKKVVAMQGRFHFYEGYSMQQIVFPIRVMKHLGITTLGITNACGGLNP CCCCEEEEEECCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHCCCEEEEHHHCCCCCCC SYKKGDIMLIDDHINLLGSNPLIGPNNPETGSRFPDMCEPYSNRILALAEQAALDNGIKV CCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHCCCCEE QRGVYIALSGPCLETRAEYRMLRLLGADVVGMSTVPEVIAAVHQGTEVFGMSIVTDECFP ECCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHEEEEEECHHHCH DCLMPVSIEEIIEVSNHAEPKMTAIFKAVVSNL HHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIAQQAKIQEAVTFIRKKTQTDYPIGIVLGTGLGALAKEIEVDFSLDYADIPNFPISTVE CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHEEEEEECCCCCCCCCCCCEE THHGKLIFGTLAGKKVVAMQGRFHFYEGYSMQQIVFPIRVMKHLGITTLGITNACGGLNP CCCCEEEEEECCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHCCCEEEEHHHCCCCCCC SYKKGDIMLIDDHINLLGSNPLIGPNNPETGSRFPDMCEPYSNRILALAEQAALDNGIKV CCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHCCCCEE QRGVYIALSGPCLETRAEYRMLRLLGADVVGMSTVPEVIAAVHQGTEVFGMSIVTDECFP ECCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHEEEEEECHHHCH DCLMPVSIEEIIEVSNHAEPKMTAIFKAVVSNL HHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9058965 [H]