| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is glgP [H]
Identifier: 119356430
GI number: 119356430
Start: 664816
End: 666927
Strand: Reverse
Name: glgP [H]
Synonym: Cpha266_0594
Alternate gene names: 119356430
Gene position: 666927-664816 (Counterclockwise)
Preceding gene: 119356432
Following gene: 119356429
Centisome position: 21.28
GC content: 49.62
Gene sequence:
>2112_bases ATGCGCAAACAAATAACCCCATGCAAGGAGCTTACCCGAAACCTCTGGTGGTCATGGGATACAGAAGCAAAAGAAGTCTT CAGGGAACTTTCTCCAATTATCTGGGAGAGAGTAAACCATAATCCGGTAGAACTGCTGCGACACATCTCCAATGACGAGC TTCGGGCTCGCTGTCAGTGCGACCTGGGAGAAAAAATCGAACGGGTCAACCAACGCTTTGCCGATTATATTTCCGACAAA AACACCTGGGCTGCTGAACATGCCCCTGAACTTGTAAAACAGCCGATCGCCTATTTCAGCGCTGAATTCGGCATACACGA AAGCGTAAGAATCTACTCCGGCGGTCTCGGTGTGCTGGCCGGCGACCACATCAAATCAGCCAGTGACCTCGGCCTTAATT TCGTCGGCATAAGCCTGTTCTACAAAGAGGGGTACTTTCGTCAGTACCTGAACCACGATGGATGGCAGATGGAAGAGTAC CCCCTGCAATACTCGGAAAACCTGCCTATAGAAAAAGTCACCGGTCCGGATGGCAAAGACCTTATCATCTCCATCAATAT TGCACAAAGCGAGGTTTTTGCCCAGGCATGGGCTCTGAAGGTAGGACGCGCAACACTCTATCTTCTCGACACCAACATTC CTGACAACGAATCGCACTATCGCGACATCTGCTGCAGAGTCTATGGTGGAGACCAGAATATGCGCATCAACCAGGAGATA CTTCTCGGAATCGGCGGCGTCAAGCTTCTTGACGCACTCAACCTGAGTCCTGCCGTATACCACATGAATGAAGGCCACTC CGCGTTTCTCACGCTCGAACTGCTTTCAAAGGAAATTGCGCTGGGAACATCACTTGAAGAGGCCAGGGAAAAAGTAAAAA GCCGCTGCGTCTTTACCACTCACACACCGGTACCAGCCGGTCACAACCGCTTTTCAAGGGATATGATGCACTACACGTTC GATAAATATCTCTCCCAGAACGGCATCGACTTTGAGGAACTCATGCTGCTTGGATCCGAAGACAGAAGCAATACGTTCGG ACTCTTTACCATGACCGTGCTGGCGCTCAACCTCTCCCGTTCCGCTAACGGTGTATCAAAGTTACATGGAGAGGTATCCC GTGCGATGTGGCAAAGCCTCTACGCCGACAAACCCGTCAGCGAAGTGCCCATTGGCCATATCACCAACGGCATTCACACG CAAAGCTGGGTATACGGTATTACTGACCGCTTCTGGCGGAAGCATACCGATAACATTGACAACATGACCATCTCTCGAGA AGCTGCTGAAGCGGTACTCGCGCAGGTCAGCGATGAAGAACTCTGGTGCCTGCGATACCGACTGAAACGTAACCTCGTTG ACTTTATTTCCCGTTATCTGGCAAACCAGTTATTCCATCAGCATACCTTCCCTGTGTTTTCCGAAAACGACCAGTCGAGA ACGGAAAAACATACGCTCTCTCCGGATATTCTCACCATAGGTTTTGCAAGGCGATTCGCAACGTACAAGCGGGCACCGCT GATTTTCAGGGATCTTGACCGGTTGAACCGCATCATCAATCATCCCAATATGCCGGTACAGATTGTCTTTGCCGGTAAAG CCCATCCCCATGACGACGCCGGAAAGGACTATATCCGTCAGATCATTGAGCACTCCCGCAGACCGCAATTTACCGGTAAG GTGATATTTCTGGAAAACTATAATCTTGGCATTGCAAAACGCATGGTATCCGGCGTAGATATCTGGCTGAACAACCCGGT AAGGCCGATGGAAGCAAGTGGAACGTCGGGAGAGAAAATCGTTATGAATGGGGGCCTGAACTTCAGCGTCCTTGACGGAT GGTGGCCTGAAGCCTACAACGGCGAAAACGGATGGTCGATTGGTAACGGAGAATCCTTTGAAAATCACGAAGAACAGGAC AGCTTTGATGCTGAAAAAATGTATTCCGTTCTGGAAAACCAGATCATCCCGACCTACTATGAACGCAACGAATTCAACAT TCCTGTTCAATGGCTCAAAAAAATTCGTAATGCGATAGCAACCATAGCGCCGATATACAATACCCATCGCATGGTCAAAG AGTATACGACACGCTACTACCTGAACCGATAA
Upstream 100 bases:
>100_bases TTATGCAACAGGCATAACTGAAAATGATGTGTCGTCACAAAGAAAACTATCTTCCGACAACTGCCGCAACGGCAAAGTAA TAAACTAATAACGCACCATT
Downstream 100 bases:
>100_bases CCCTTCCTTCCTGGAGAAGGGTTATGCAGGGGAGACCTGTGAATGAGTCTCCCCTGCGCCCTCTTCCGAGAACAGAGAAA GAAACGATGAACCAATCATG
Product: alpha-glucan phosphorylases
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 703; Mature: 703
Protein sequence:
>703_residues MRKQITPCKELTRNLWWSWDTEAKEVFRELSPIIWERVNHNPVELLRHISNDELRARCQCDLGEKIERVNQRFADYISDK NTWAAEHAPELVKQPIAYFSAEFGIHESVRIYSGGLGVLAGDHIKSASDLGLNFVGISLFYKEGYFRQYLNHDGWQMEEY PLQYSENLPIEKVTGPDGKDLIISINIAQSEVFAQAWALKVGRATLYLLDTNIPDNESHYRDICCRVYGGDQNMRINQEI LLGIGGVKLLDALNLSPAVYHMNEGHSAFLTLELLSKEIALGTSLEEAREKVKSRCVFTTHTPVPAGHNRFSRDMMHYTF DKYLSQNGIDFEELMLLGSEDRSNTFGLFTMTVLALNLSRSANGVSKLHGEVSRAMWQSLYADKPVSEVPIGHITNGIHT QSWVYGITDRFWRKHTDNIDNMTISREAAEAVLAQVSDEELWCLRYRLKRNLVDFISRYLANQLFHQHTFPVFSENDQSR TEKHTLSPDILTIGFARRFATYKRAPLIFRDLDRLNRIINHPNMPVQIVFAGKAHPHDDAGKDYIRQIIEHSRRPQFTGK VIFLENYNLGIAKRMVSGVDIWLNNPVRPMEASGTSGEKIVMNGGLNFSVLDGWWPEAYNGENGWSIGNGESFENHEEQD SFDAEKMYSVLENQIIPTYYERNEFNIPVQWLKKIRNAIATIAPIYNTHRMVKEYTTRYYLNR
Sequences:
>Translated_703_residues MRKQITPCKELTRNLWWSWDTEAKEVFRELSPIIWERVNHNPVELLRHISNDELRARCQCDLGEKIERVNQRFADYISDK NTWAAEHAPELVKQPIAYFSAEFGIHESVRIYSGGLGVLAGDHIKSASDLGLNFVGISLFYKEGYFRQYLNHDGWQMEEY PLQYSENLPIEKVTGPDGKDLIISINIAQSEVFAQAWALKVGRATLYLLDTNIPDNESHYRDICCRVYGGDQNMRINQEI LLGIGGVKLLDALNLSPAVYHMNEGHSAFLTLELLSKEIALGTSLEEAREKVKSRCVFTTHTPVPAGHNRFSRDMMHYTF DKYLSQNGIDFEELMLLGSEDRSNTFGLFTMTVLALNLSRSANGVSKLHGEVSRAMWQSLYADKPVSEVPIGHITNGIHT QSWVYGITDRFWRKHTDNIDNMTISREAAEAVLAQVSDEELWCLRYRLKRNLVDFISRYLANQLFHQHTFPVFSENDQSR TEKHTLSPDILTIGFARRFATYKRAPLIFRDLDRLNRIINHPNMPVQIVFAGKAHPHDDAGKDYIRQIIEHSRRPQFTGK VIFLENYNLGIAKRMVSGVDIWLNNPVRPMEASGTSGEKIVMNGGLNFSVLDGWWPEAYNGENGWSIGNGESFENHEEQD SFDAEKMYSVLENQIIPTYYERNEFNIPVQWLKKIRNAIATIAPIYNTHRMVKEYTTRYYLNR >Mature_703_residues MRKQITPCKELTRNLWWSWDTEAKEVFRELSPIIWERVNHNPVELLRHISNDELRARCQCDLGEKIERVNQRFADYISDK NTWAAEHAPELVKQPIAYFSAEFGIHESVRIYSGGLGVLAGDHIKSASDLGLNFVGISLFYKEGYFRQYLNHDGWQMEEY PLQYSENLPIEKVTGPDGKDLIISINIAQSEVFAQAWALKVGRATLYLLDTNIPDNESHYRDICCRVYGGDQNMRINQEI LLGIGGVKLLDALNLSPAVYHMNEGHSAFLTLELLSKEIALGTSLEEAREKVKSRCVFTTHTPVPAGHNRFSRDMMHYTF DKYLSQNGIDFEELMLLGSEDRSNTFGLFTMTVLALNLSRSANGVSKLHGEVSRAMWQSLYADKPVSEVPIGHITNGIHT QSWVYGITDRFWRKHTDNIDNMTISREAAEAVLAQVSDEELWCLRYRLKRNLVDFISRYLANQLFHQHTFPVFSENDQSR TEKHTLSPDILTIGFARRFATYKRAPLIFRDLDRLNRIINHPNMPVQIVFAGKAHPHDDAGKDYIRQIIEHSRRPQFTGK VIFLENYNLGIAKRMVSGVDIWLNNPVRPMEASGTSGEKIVMNGGLNFSVLDGWWPEAYNGENGWSIGNGESFENHEEQD SFDAEKMYSVLENQIIPTYYERNEFNIPVQWLKKIRNAIATIAPIYNTHRMVKEYTTRYYLNR
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=389, Percent_Identity=23.6503856041131, Blast_Score=77, Evalue=7e-14, Organism=Homo sapiens, GI5032009, Length=423, Percent_Identity=22.2222222222222, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI257900462, Length=423, Percent_Identity=22.4586288416076, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI2367228, Length=282, Percent_Identity=28.3687943262411, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 80975; Mature: 80975
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKQITPCKELTRNLWWSWDTEAKEVFRELSPIIWERVNHNPVELLRHISNDELRARCQC CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCCC DLGEKIERVNQRFADYISDKNTWAAEHAPELVKQPIAYFSAEFGIHESVRIYSGGLGVLA CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEE GDHIKSASDLGLNFVGISLFYKEGYFRQYLNHDGWQMEEYPLQYSENLPIEKVTGPDGKD CCCCCCHHHCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCE LIISINIAQSEVFAQAWALKVGRATLYLLDTNIPDNESHYRDICCRVYGGDQNMRINQEI EEEEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHEEEEECCCCCCEECHHH LLGIGGVKLLDALNLSPAVYHMNEGHSAFLTLELLSKEIALGTSLEEAREKVKSRCVFTT EEECCCHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHCEEEEE HTPVPAGHNRFSRDMMHYTFDKYLSQNGIDFEELMLLGSEDRSNTFGLFTMTVLALNLSR CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHCC SANGVSKLHGEVSRAMWQSLYADKPVSEVPIGHITNGIHTQSWVYGITDRFWRKHTDNID CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCC NMTISREAAEAVLAQVSDEELWCLRYRLKRNLVDFISRYLANQLFHQHTFPVFSENDQSR CEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH TEKHTLSPDILTIGFARRFATYKRAPLIFRDLDRLNRIINHPNMPVQIVFAGKAHPHDDA HHHHCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC GKDYIRQIIEHSRRPQFTGKVIFLENYNLGIAKRMVSGVDIWLNNPVRPMEASGTSGEKI CHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCEE VMNGGLNFSVLDGWWPEAYNGENGWSIGNGESFENHEEQDSFDAEKMYSVLENQIIPTYY EEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCEE ERNEFNIPVQWLKKIRNAIATIAPIYNTHRMVKEYTTRYYLNR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKQITPCKELTRNLWWSWDTEAKEVFRELSPIIWERVNHNPVELLRHISNDELRARCQC CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCCC DLGEKIERVNQRFADYISDKNTWAAEHAPELVKQPIAYFSAEFGIHESVRIYSGGLGVLA CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEE GDHIKSASDLGLNFVGISLFYKEGYFRQYLNHDGWQMEEYPLQYSENLPIEKVTGPDGKD CCCCCCHHHCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCE LIISINIAQSEVFAQAWALKVGRATLYLLDTNIPDNESHYRDICCRVYGGDQNMRINQEI EEEEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHEEEEECCCCCCEECHHH LLGIGGVKLLDALNLSPAVYHMNEGHSAFLTLELLSKEIALGTSLEEAREKVKSRCVFTT EEECCCHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHCEEEEE HTPVPAGHNRFSRDMMHYTFDKYLSQNGIDFEELMLLGSEDRSNTFGLFTMTVLALNLSR CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHCC SANGVSKLHGEVSRAMWQSLYADKPVSEVPIGHITNGIHTQSWVYGITDRFWRKHTDNID CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCC NMTISREAAEAVLAQVSDEELWCLRYRLKRNLVDFISRYLANQLFHQHTFPVFSENDQSR CEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH TEKHTLSPDILTIGFARRFATYKRAPLIFRDLDRLNRIINHPNMPVQIVFAGKAHPHDDA HHHHCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC GKDYIRQIIEHSRRPQFTGKVIFLENYNLGIAKRMVSGVDIWLNNPVRPMEASGTSGEKI CHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCEE VMNGGLNFSVLDGWWPEAYNGENGWSIGNGESFENHEEQDSFDAEKMYSVLENQIIPTYY EEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCEE ERNEFNIPVQWLKKIRNAIATIAPIYNTHRMVKEYTTRYYLNR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]