| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is ftnA [H]
Identifier: 119356432
GI number: 119356432
Start: 668001
End: 668495
Strand: Reverse
Name: ftnA [H]
Synonym: Cpha266_0596
Alternate gene names: 119356432
Gene position: 668495-668001 (Counterclockwise)
Preceding gene: 119356433
Following gene: 119356430
Centisome position: 21.33
GC content: 47.68
Gene sequence:
>495_bases ATGCTGAGCACATCATTGCAACAGGCTTTCAATGAACAGATAAACCATGAAATGGCATCAGCCTATCTTTATCTTTCCAT GGCTGCATACGCTGAATCCAGGAGCCTGCCAGGTTTCGCAAACTGGATGAAACTGCAAACCAAGGAAGAGATGGGACATG CCATGAAACTCTATAAATTTGTCAACGAACGAGGCGGACGCGTCATACTCACAGCAATGGACACTCCGAAGGCAGATTTT TCATCACCGACAGAACTTTTCGAAGAGGTTCTCAAACACGAACGACAGATAACAGCACTCATCAATAAACTCTATGAGGC GACGCTTGAAGCAAAAGACTACGCGGCACAAGTTCTGCTGCACTGGTTCATTCAGGAACAGGTGGAAGAAGAGGCCTCTG CATCTGAAATTCTCGAGACTCTGAAAATGGCCGGTGAGAAAGGGCATGCGCTGATCATGATGGACAGACAGCTCGCCCGC AGAGGACAGGGTTAA
Upstream 100 bases:
>100_bases AGAGCTATAACGGAAACGAACAGCCGGATCGATATGTTGATTTCGCATATCATTATTGACTTCGGAATATTTACAAAAAA AAGAGCAAAGGAGAACACTT
Downstream 100 bases:
>100_bases CAAGCCATCTTAAACAGAACGGTCGTCTCTGCAAAAAAGCGGCCGTTTTGTCATGCTTATGCCAAATTCAAAAACTGTTG TGAAAACGATCCGTCGCACC
Product: Ferritin, Dps family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MLSTSLQQAFNEQINHEMASAYLYLSMAAYAESRSLPGFANWMKLQTKEEMGHAMKLYKFVNERGGRVILTAMDTPKADF SSPTELFEEVLKHERQITALINKLYEATLEAKDYAAQVLLHWFIQEQVEEEASASEILETLKMAGEKGHALIMMDRQLAR RGQG
Sequences:
>Translated_164_residues MLSTSLQQAFNEQINHEMASAYLYLSMAAYAESRSLPGFANWMKLQTKEEMGHAMKLYKFVNERGGRVILTAMDTPKADF SSPTELFEEVLKHERQITALINKLYEATLEAKDYAAQVLLHWFIQEQVEEEASASEILETLKMAGEKGHALIMMDRQLAR RGQG >Mature_164_residues MLSTSLQQAFNEQINHEMASAYLYLSMAAYAESRSLPGFANWMKLQTKEEMGHAMKLYKFVNERGGRVILTAMDTPKADF SSPTELFEEVLKHERQITALINKLYEATLEAKDYAAQVLLHWFIQEQVEEEASASEILETLKMAGEKGHALIMMDRQLAR RGQG
Specific function: May alleviate iron toxicity in the presence of oxygen [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=159, Percent_Identity=33.9622641509434, Blast_Score=107, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17506345, Length=146, Percent_Identity=30.1369863013699, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 18678; Mature: 18678
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTSLQQAFNEQINHEMASAYLYLSMAAYAESRSLPGFANWMKLQTKEEMGHAMKLYKF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VNERGGRVILTAMDTPKADFSSPTELFEEVLKHERQITALINKLYEATLEAKDYAAQVLL HHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HWFIQEQVEEEASASEILETLKMAGEKGHALIMMDRQLARRGQG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCC >Mature Secondary Structure MLSTSLQQAFNEQINHEMASAYLYLSMAAYAESRSLPGFANWMKLQTKEEMGHAMKLYKF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VNERGGRVILTAMDTPKADFSSPTELFEEVLKHERQITALINKLYEATLEAKDYAAQVLL HHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HWFIQEQVEEEASASEILETLKMAGEKGHALIMMDRQLARRGQG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA