| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yceI [H]
Identifier: 119356351
GI number: 119356351
Start: 563847
End: 565085
Strand: Direct
Name: yceI [H]
Synonym: Cpha266_0514
Alternate gene names: 119356351
Gene position: 563847-565085 (Clockwise)
Preceding gene: 119356350
Following gene: 119356352
Centisome position: 17.99
GC content: 48.1
Gene sequence:
>1239_bases GTGCACAAGGAACATGCTTCGGTCAGAGATATTTTCAGTCTTCCTGTCATCGTTGCTGCGCTCGGGTATTTTGTCGATAT CTATGACCTGGTGCTCTTCAGTATTGTACGGGTGCCGAGCCTTAAATCATTGGGCCTTGAGGGAAAACAACTGATTGACT ACGGAGTTTATCTGCTGAATATGCAGATGATCGGCATGCTGCTTGGCGGTATTCTCTGGGGATGGCTTGGCGACAGGAAA GGACGACTGAAAATCATGTTCGGTTCGATCCTGCTGTACTCGCTTGCCAATATTGCCAATGGTTTTGTGACCTCTTTGCC CGCTTATGCGCTGATGCGGTTTATAGCAGGAATCGGACTTGCAGGTGAACTCGGTGCCGGCATTACCCTTGTTTCGGAGG TTCTTCATACAAAGATCCGCGGATACGGTACCATGCTTGTTGCTTCAATCGGAGTTTCCGGCGCAATTCTTGCCAATTTT GTTGCCAATACCTATGAGTGGCATAATGCTTTTTTTATCGGAGGCGGACTTGGATTTCTTCTTCTGTTTGCCAGAGTAAA GGTGGCCGAGTCGGGTATGTTTAAGGCCATGGAGGAGAAAGCCGGGGTCAATCGGGGTAATATGCTCGCACTGTTTACGG ACAGGAATCGCTTTTTTCGCTATCTAAATTCAATTCTTATCGGGGTTCCAATCTGGTTTGTTGTTGGTGTGCTTATTACC TTTTCTCCTGAATTTGCGGTTTCCTTTGGTATTCCTGAACCGGTTTCTGCCGGAAACGCAGTCATGTTCTGCTACCTTGG TCTGGTTTTTGGCGATTTGTCGAGCGGTCTGCTGAGTCAGCTTTTTCAGAGCAGGAGAAAGGTTATTCTTTTGTTTATGC TTTTGTCGGTCGCTGCCGTAGCGCTTTATTTTATGCAGGGGTCGAGCAGCCCGGCTTTCTTTTATGGCGTTTGTTCCCTA CTCGGATTTGCAAGCGGTTACTGGGCTGTTTTTGTTACTGTTGCCGCCGAACAGTTCGGAACGAATCTTCGGGCTACCGT TGCGACAACGGTGCCGAACTTTGTTCGTGGTATGGTGGTGCCGATTACCATGCTTTTTCAATTCACGAAAGGGCTGTTCG GCCTGGAAAACGGTGCGCTGCTTGTTGGAACGCTGTGCATCGTTGTCGCATTTTTTTCCCTTGGCGCCCTTGAGGAGACC TTTCACAAGGATCTTGATTATTATGAAGAGTTTCTCTGA
Upstream 100 bases:
>100_bases GAGCGGTTTATGCTATTCTGCAATAACCGATTACCCTGTTTGATTAATAACACAATCATGGTCCGGTTATATAAGCTGGA GCTTAGAGGAGGTTTTTCTG
Downstream 100 bases:
>100_bases CTGAACGATTTTCGGTTGTACCGTTGTTTGTTGTTTAGCTGATTTTCCTTGAGGGTTGTTGTGTGTTTATGATGGATGAG ATTTTATGAAACACAAAAAA
Product: major facilitator transporter
Products: Proton [Cytoplasm]; N-acetylneuraminate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MHKEHASVRDIFSLPVIVAALGYFVDIYDLVLFSIVRVPSLKSLGLEGKQLIDYGVYLLNMQMIGMLLGGILWGWLGDRK GRLKIMFGSILLYSLANIANGFVTSLPAYALMRFIAGIGLAGELGAGITLVSEVLHTKIRGYGTMLVASIGVSGAILANF VANTYEWHNAFFIGGGLGFLLLFARVKVAESGMFKAMEEKAGVNRGNMLALFTDRNRFFRYLNSILIGVPIWFVVGVLIT FSPEFAVSFGIPEPVSAGNAVMFCYLGLVFGDLSSGLLSQLFQSRRKVILLFMLLSVAAVALYFMQGSSSPAFFYGVCSL LGFASGYWAVFVTVAAEQFGTNLRATVATTVPNFVRGMVVPITMLFQFTKGLFGLENGALLVGTLCIVVAFFSLGALEET FHKDLDYYEEFL
Sequences:
>Translated_412_residues MHKEHASVRDIFSLPVIVAALGYFVDIYDLVLFSIVRVPSLKSLGLEGKQLIDYGVYLLNMQMIGMLLGGILWGWLGDRK GRLKIMFGSILLYSLANIANGFVTSLPAYALMRFIAGIGLAGELGAGITLVSEVLHTKIRGYGTMLVASIGVSGAILANF VANTYEWHNAFFIGGGLGFLLLFARVKVAESGMFKAMEEKAGVNRGNMLALFTDRNRFFRYLNSILIGVPIWFVVGVLIT FSPEFAVSFGIPEPVSAGNAVMFCYLGLVFGDLSSGLLSQLFQSRRKVILLFMLLSVAAVALYFMQGSSSPAFFYGVCSL LGFASGYWAVFVTVAAEQFGTNLRATVATTVPNFVRGMVVPITMLFQFTKGLFGLENGALLVGTLCIVVAFFSLGALEET FHKDLDYYEEFL >Mature_412_residues MHKEHASVRDIFSLPVIVAALGYFVDIYDLVLFSIVRVPSLKSLGLEGKQLIDYGVYLLNMQMIGMLLGGILWGWLGDRK GRLKIMFGSILLYSLANIANGFVTSLPAYALMRFIAGIGLAGELGAGITLVSEVLHTKIRGYGTMLVASIGVSGAILANF VANTYEWHNAFFIGGGLGFLLLFARVKVAESGMFKAMEEKAGVNRGNMLALFTDRNRFFRYLNSILIGVPIWFVVGVLIT FSPEFAVSFGIPEPVSAGNAVMFCYLGLVFGDLSSGLLSQLFQSRRKVILLFMLLSVAAVALYFMQGSSSPAFFYGVCSL LGFASGYWAVFVTVAAEQFGTNLRATVATTVPNFVRGMVVPITMLFQFTKGLFGLENGALLVGTLCIVVAFFSLGALEET FHKDLDYYEEFL
Specific function: May Be A Sugar-Cation Symporter Involved In Sialic Acid Transport As It Is Required For Sialic Acid Uptake. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082231, Length=220, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87082404, Length=203, Percent_Identity=28.5714285714286, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI87081723, Length=311, Percent_Identity=26.3665594855305, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44877; Mature: 44877
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKEHASVRDIFSLPVIVAALGYFVDIYDLVLFSIVRVPSLKSLGLEGKQLIDYGVYLLN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHH MQMIGMLLGGILWGWLGDRKGRLKIMFGSILLYSLANIANGFVTSLPAYALMRFIAGIGL HHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGELGAGITLVSEVLHTKIRGYGTMLVASIGVSGAILANFVANTYEWHNAFFIGGGLGFL CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECHHHHH LLFARVKVAESGMFKAMEEKAGVNRGNMLALFTDRNRFFRYLNSILIGVPIWFVVGVLIT HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH FSPEFAVSFGIPEPVSAGNAVMFCYLGLVFGDLSSGLLSQLFQSRRKVILLFMLLSVAAV CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALYFMQGSSSPAFFYGVCSLLGFASGYWAVFVTVAAEQFGTNLRATVATTVPNFVRGMVV HHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH PITMLFQFTKGLFGLENGALLVGTLCIVVAFFSLGALEETFHKDLDYYEEFL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHKEHASVRDIFSLPVIVAALGYFVDIYDLVLFSIVRVPSLKSLGLEGKQLIDYGVYLLN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHH MQMIGMLLGGILWGWLGDRKGRLKIMFGSILLYSLANIANGFVTSLPAYALMRFIAGIGL HHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGELGAGITLVSEVLHTKIRGYGTMLVASIGVSGAILANFVANTYEWHNAFFIGGGLGFL CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECHHHHH LLFARVKVAESGMFKAMEEKAGVNRGNMLALFTDRNRFFRYLNSILIGVPIWFVVGVLIT HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH FSPEFAVSFGIPEPVSAGNAVMFCYLGLVFGDLSSGLLSQLFQSRRKVILLFMLLSVAAV CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALYFMQGSSSPAFFYGVCSLLGFASGYWAVFVTVAAEQFGTNLRATVATTVPNFVRGMVV HHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH PITMLFQFTKGLFGLENGALLVGTLCIVVAFFSLGALEETFHKDLDYYEEFL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; N-acetylneuraminate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + N-acetylneuraminate [Periplasm] = Proton [Cytoplasm] + N-acetylneuraminate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]