| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356352
Identifier: 119356352
GI number: 119356352
Start: 565197
End: 565802
Strand: Direct
Name: 119356352
Synonym: Cpha266_0515
Alternate gene names: NA
Gene position: 565197-565802 (Clockwise)
Preceding gene: 119356351
Following gene: 119356356
Centisome position: 18.03
GC content: 45.54
Gene sequence:
>606_bases ATGGCAATTAATCGTTCGTTTTTTTTTGATCATGTACGGCTTTACCTGTTTGATGGTAAACTGAAACAGAGTCAGGTTCA GGGCCTTGATGCCATTCTGGATTACTGGGGTAATAAGATGGAGGCATGTGATGACAGATGGCTGGCCTATGCTCTTGCAA CTGCTCATCATGAGACTGACCGCTCCATGCAGCCAATAAAAGAGTACGGATCGACGGCCTATTTTATGAGGATGTATGAT TGCAGTGGTGGTCGCCCTCTGGTTGCAAAGAACCTGGGAAATACGCATCCGGGTGATGGTGCAAAATACTATGGGAGGGG CTATGTGCAGTTGACCGGTCGCCGGAACTACACGGATTGGTCAAAACGCCTTGATCATGATCTGGTTGGTAATCCGGATC TTGCTCTTGATCCTGCTATAGCTACTCGAATTCTTTTTGAGGGAATGCGTCAAGGAACCTTTACCGGCAGGAAATTTGCC GATTATTTCAATCCTCAAAAAGAAGACTGGCTGAATGCTCGCAGAATTATCAATTGGATTGATAAGGCAAATCTTATAGA GGGTTACGGCAAGCGATACTATGGAGGGATAAGTTATACGACCTGA
Upstream 100 bases:
>100_bases TCGGTTGTACCGTTGTTTGTTGTTTAGCTGATTTTCCTTGAGGGTTGTTGTGTGTTTATGATGGATGAGATTTTATGAAA CACAAAAAAAGGAGGCTGTG
Downstream 100 bases:
>100_bases GCAGAACATTTCGGTCAGATCGGGGTGCCTCTGATAAGCGTTGTTGCGATAAGGTTGCCTGAATTTGTCGAGGTTTACGA CGACGGTTAGCAGAGGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MAINRSFFFDHVRLYLFDGKLKQSQVQGLDAILDYWGNKMEACDDRWLAYALATAHHETDRSMQPIKEYGSTAYFMRMYD CSGGRPLVAKNLGNTHPGDGAKYYGRGYVQLTGRRNYTDWSKRLDHDLVGNPDLALDPAIATRILFEGMRQGTFTGRKFA DYFNPQKEDWLNARRIINWIDKANLIEGYGKRYYGGISYTT
Sequences:
>Translated_201_residues MAINRSFFFDHVRLYLFDGKLKQSQVQGLDAILDYWGNKMEACDDRWLAYALATAHHETDRSMQPIKEYGSTAYFMRMYD CSGGRPLVAKNLGNTHPGDGAKYYGRGYVQLTGRRNYTDWSKRLDHDLVGNPDLALDPAIATRILFEGMRQGTFTGRKFA DYFNPQKEDWLNARRIINWIDKANLIEGYGKRYYGGISYTT >Mature_200_residues AINRSFFFDHVRLYLFDGKLKQSQVQGLDAILDYWGNKMEACDDRWLAYALATAHHETDRSMQPIKEYGSTAYFMRMYDC SGGRPLVAKNLGNTHPGDGAKYYGRGYVQLTGRRNYTDWSKRLDHDLVGNPDLALDPAIATRILFEGMRQGTFTGRKFAD YFNPQKEDWLNARRIINWIDKANLIEGYGKRYYGGISYTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23212; Mature: 23081
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINRSFFFDHVRLYLFDGKLKQSQVQGLDAILDYWGNKMEACDDRWLAYALATAHHETD CCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC RSMQPIKEYGSTAYFMRMYDCSGGRPLVAKNLGNTHPGDGAKYYGRGYVQLTGRRNYTDW CHHHHHHHHCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCEECCCEEEEECCCCCCCHH SKRLDHDLVGNPDLALDPAIATRILFEGMRQGTFTGRKFADYFNPQKEDWLNARRIINWI HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH DKANLIEGYGKRYYGGISYTT HHHHHHHHHCHHHCCCCCCCC >Mature Secondary Structure AINRSFFFDHVRLYLFDGKLKQSQVQGLDAILDYWGNKMEACDDRWLAYALATAHHETD CCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC RSMQPIKEYGSTAYFMRMYDCSGGRPLVAKNLGNTHPGDGAKYYGRGYVQLTGRRNYTDW CHHHHHHHHCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCEECCCEEEEECCCCCCCHH SKRLDHDLVGNPDLALDPAIATRILFEGMRQGTFTGRKFADYFNPQKEDWLNARRIINWI HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH DKANLIEGYGKRYYGGISYTT HHHHHHHHHCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA