| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is murI
Identifier: 119356253
GI number: 119356253
Start: 458654
End: 459472
Strand: Reverse
Name: murI
Synonym: Cpha266_0415
Alternate gene names: 119356253
Gene position: 459472-458654 (Counterclockwise)
Preceding gene: 119356254
Following gene: 119356252
Centisome position: 14.66
GC content: 50.06
Gene sequence:
>819_bases TTGCAGCACCATAAAGCCACACCAGAGAGCCCGATAGGAATTTTCGATTCGGGTGTCGGAGGTTTAACCGTTGTCAGGGC GATACAGGCAGAAATGCCTGCCGAACGCATTATTTATTTTGGTGATACGGCACGCGTTCCATACGGCACAAAGTCCCCGG CAACAATCCGCAAATACGCTCATGAAGACACGGCGATCCTTATGAGCCATCTGCCGAAAATTATTATTGTCGCCTGCAAC ACCGTATCGGCTCTCGCTCTTGATGTCGTTGAAAAAACAGCGGGAAGCATTCCGGTTATCGGCGTTCTCAAAGCAGGTGC TGACCTCGCCGTTCAGGTAACCCGAAACAAACATGTCGGAGTCATTGGAACGCAGGCTACCGTAAGCTCAAATGCCTACG CTGATGCGATCACCCTGCTTGATGCGAACATAGAGGTTGTATCAAAGGCCTGTCCTCTTTTTGTTCCCCTCGCTGAAGAG GGATTCACCGAACATGCAGCGACCCGACTTATCGCCAGTGATTACCTGGCCGCATTTGATGGACACGATATTGACACTCT CGTGCTTGGCTGTACCCATTACCCTATTCTTCGTCATGTGATTACTGAAACCCTGCACCGTGATATCCGCATTATTGACT CTGCAGAAGCCGTAGCGGGCAGAACGAGAAAACTTCTTGCTGACGCTAAACTCCTCAGCACAGAAAAGCATGCTCCGCCG CCACATCTGCTCGTCAGCGATCTGCCCCAGAAGTTCAGTATGCTCTATAAACTTTTTATGGAATCGGATCTCCCTGATGT CGAACTTGTTGAAGTATGA
Upstream 100 bases:
>100_bases AAACTCCGTTCGGAAGGAAGAGAGTATATCGTCAGGGATGGAGATATTATCGTATTCAGATTTAACGTATAAGAGCCCAA AAAGCACAATTTTTTCAGCA
Downstream 100 bases:
>100_bases ACGGTAACCGTCGGAACTTTCGTTCTCGCCTGATCAAGACAGCGACCCGTCCATCCTCTTTGTTTCCGGCAATTGTTGCC TTTTGACTCTGGACTTCTTA
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MQHHKATPESPIGIFDSGVGGLTVVRAIQAEMPAERIIYFGDTARVPYGTKSPATIRKYAHEDTAILMSHLPKIIIVACN TVSALALDVVEKTAGSIPVIGVLKAGADLAVQVTRNKHVGVIGTQATVSSNAYADAITLLDANIEVVSKACPLFVPLAEE GFTEHAATRLIASDYLAAFDGHDIDTLVLGCTHYPILRHVITETLHRDIRIIDSAEAVAGRTRKLLADAKLLSTEKHAPP PHLLVSDLPQKFSMLYKLFMESDLPDVELVEV
Sequences:
>Translated_272_residues MQHHKATPESPIGIFDSGVGGLTVVRAIQAEMPAERIIYFGDTARVPYGTKSPATIRKYAHEDTAILMSHLPKIIIVACN TVSALALDVVEKTAGSIPVIGVLKAGADLAVQVTRNKHVGVIGTQATVSSNAYADAITLLDANIEVVSKACPLFVPLAEE GFTEHAATRLIASDYLAAFDGHDIDTLVLGCTHYPILRHVITETLHRDIRIIDSAEAVAGRTRKLLADAKLLSTEKHAPP PHLLVSDLPQKFSMLYKLFMESDLPDVELVEV >Mature_272_residues MQHHKATPESPIGIFDSGVGGLTVVRAIQAEMPAERIIYFGDTARVPYGTKSPATIRKYAHEDTAILMSHLPKIIIVACN TVSALALDVVEKTAGSIPVIGVLKAGADLAVQVTRNKHVGVIGTQATVSSNAYADAITLLDANIEVVSKACPLFVPLAEE GFTEHAATRLIASDYLAAFDGHDIDTLVLGCTHYPILRHVITETLHRDIRIIDSAEAVAGRTRKLLADAKLLSTEKHAPP PHLLVSDLPQKFSMLYKLFMESDLPDVELVEV
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family
Homologues:
Organism=Escherichia coli, GI87082355, Length=230, Percent_Identity=33.0434782608696, Blast_Score=85, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURI_CHLPD (A1BDJ6)
Other databases:
- EMBL: CP000492 - RefSeq: YP_910897.1 - ProteinModelPortal: A1BDJ6 - SMR: A1BDJ6 - STRING: A1BDJ6 - GeneID: 4570969 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_0415 - NMPDR: fig|290317.7.peg.426 - eggNOG: COG0796 - HOGENOM: HBG645102 - OMA: AILGCTH - ProtClustDB: PRK00865 - HAMAP: MF_00258 - InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 - Gene3D: G3DSA:3.40.50.1860 - TIGRFAMs: TIGR00067
Pfam domain/function: PF01177 Asp_Glu_race; SSF53681 Asp/Glu_race
EC number: =5.1.1.3
Molecular weight: Translated: 29299; Mature: 29299
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00923 ASP_GLU_RACEMASE_1; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHHKATPESPIGIFDSGVGGLTVVRAIQAEMPAERIIYFGDTARVPYGTKSPATIRKYA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCHHHHHHH HEDTAILMSHLPKIIIVACNTVSALALDVVEKTAGSIPVIGVLKAGADLAVQVTRNKHVG CCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCEE VIGTQATVSSNAYADAITLLDANIEVVSKACPLFVPLAEEGFTEHAATRLIASDYLAAFD EEECCEEECCCCHHHEEEEEECCHHHHHCCCCEEEECHHCCCHHHHHHHHHHHHHHHHCC GHDIDTLVLGCTHYPILRHVITETLHRDIRIIDSAEAVAGRTRKLLADAKLLSTEKHAPP CCCCHHEEECCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCCCC PHLLVSDLPQKFSMLYKLFMESDLPDVELVEV CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure MQHHKATPESPIGIFDSGVGGLTVVRAIQAEMPAERIIYFGDTARVPYGTKSPATIRKYA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCHHHHHHH HEDTAILMSHLPKIIIVACNTVSALALDVVEKTAGSIPVIGVLKAGADLAVQVTRNKHVG CCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCEE VIGTQATVSSNAYADAITLLDANIEVVSKACPLFVPLAEEGFTEHAATRLIASDYLAAFD EEECCEEECCCCHHHEEEEEECCHHHHHCCCCEEEECHHCCCHHHHHHHHHHHHHHHHCC GHDIDTLVLGCTHYPILRHVITETLHRDIRIIDSAEAVAGRTRKLLADAKLLSTEKHAPP CCCCHHEEECCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCCCC PHLLVSDLPQKFSMLYKLFMESDLPDVELVEV CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA