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The map label for this gene is 119356182

Identifier: 119356182

GI number: 119356182

Start: 376201

End: 376872

Strand: Reverse

Name: 119356182

Synonym: Cpha266_0343

Alternate gene names: NA

Gene position: 376872-376201 (Counterclockwise)

Preceding gene: 119356183

Following gene: 119356181

Centisome position: 12.03

GC content: 49.85

Gene sequence:

>672_bases
ATGCACCCTTTCTTATTCAGCGATCATGACGACACGCTGCCTTCAGTTCAGTCTGAGGCTGGAGCTCCATTCAGAGATCT
GATCGGCCTCTCTCTGGCGGTTAAATCGTGCACTAAATGCCGGCTCTCCGCTTCAAGAAAAAACGTTGTATTCGGTGAAG
GAGATCCCCGCGCCGCCCTTGTGGTCATCGGAGAAGCACCCGGTGCGGATGAGGACAGCCAAGGCCGCCCGTTCGTTGGC
AGATCGGGACAACTGCTCGACAAGATTCTTCAAGCCGTACAGTTCAAGCGTGAGGAAGTTTTTATCTGTAATATTCTCAA
ATGTCGACCACCTCAAAACCGCAACCCGCTTGCTGATGAAATAGAGTGCTGCATGCCATGGCTGCTCCTGCAGCTTGAAC
TCCTCAATCCAAAACTGATTCTGCTGCTCGGCAAAGTCGCAGCCAATACCATTTTGCAGAACAGTTTATCGATGGGAGCG
ATGAGAGGACGAATTGTCAAATGGAAAGCGTACGACTGTATGGTTACCTATCATCCCGCCGCTCTGTTAAGAAATCCCGG
TTGGAAAAAAGCCTGCTGGGAGGATGTTCAGATGATGCGTCAGCACTATGATAAACTTTGCTCAGCCGAAGCACATTCAA
GAACCATGGTAACAAACAATGATCAAGCCTAA

Upstream 100 bases:

>100_bases
TCCTGCCTCTTTTGTCGAAACCGGATGCGGCAAACCGTCTTTTGGAAGCTGTAGAAAAACTCATCCAGCCTGACAGCTAA
TCGAAGAACCAGTTTTTCTC

Downstream 100 bases:

>100_bases
AGCGGATATACTGGATTTCAGCAAGGACATCGATTTCAACCTCGAAGGCCGTGTTCCCCCCTACTCAACCGAGATTGAAC
AGGAGGTGCTCGCCTGTGTT

Product: phage SPO1 DNA polymerase-related protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; DNA Polymerase-Related Protein; DNA Glycosylase; Phage DNA Polymerase; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; DNA Polymerase Domain-Containing Protein; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Phage SpO1 DNA Polymerase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Uracil DNA Glycosylase; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MHPFLFSDHDDTLPSVQSEAGAPFRDLIGLSLAVKSCTKCRLSASRKNVVFGEGDPRAALVVIGEAPGADEDSQGRPFVG
RSGQLLDKILQAVQFKREEVFICNILKCRPPQNRNPLADEIECCMPWLLLQLELLNPKLILLLGKVAANTILQNSLSMGA
MRGRIVKWKAYDCMVTYHPAALLRNPGWKKACWEDVQMMRQHYDKLCSAEAHSRTMVTNNDQA

Sequences:

>Translated_223_residues
MHPFLFSDHDDTLPSVQSEAGAPFRDLIGLSLAVKSCTKCRLSASRKNVVFGEGDPRAALVVIGEAPGADEDSQGRPFVG
RSGQLLDKILQAVQFKREEVFICNILKCRPPQNRNPLADEIECCMPWLLLQLELLNPKLILLLGKVAANTILQNSLSMGA
MRGRIVKWKAYDCMVTYHPAALLRNPGWKKACWEDVQMMRQHYDKLCSAEAHSRTMVTNNDQA
>Mature_223_residues
MHPFLFSDHDDTLPSVQSEAGAPFRDLIGLSLAVKSCTKCRLSASRKNVVFGEGDPRAALVVIGEAPGADEDSQGRPFVG
RSGQLLDKILQAVQFKREEVFICNILKCRPPQNRNPLADEIECCMPWLLLQLELLNPKLILLLGKVAANTILQNSLSMGA
MRGRIVKWKAYDCMVTYHPAALLRNPGWKKACWEDVQMMRQHYDKLCSAEAHSRTMVTNNDQA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 24892; Mature: 24892

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPFLFSDHDDTLPSVQSEAGAPFRDLIGLSLAVKSCTKCRLSASRKNVVFGEGDPRAAL
CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE
VVIGEAPGADEDSQGRPFVGRSGQLLDKILQAVQFKREEVFICNILKCRPPQNRNPLADE
EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHH
IECCMPWLLLQLELLNPKLILLLGKVAANTILQNSLSMGAMRGRIVKWKAYDCMVTYHPA
HHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCH
ALLRNPGWKKACWEDVQMMRQHYDKLCSAEAHSRTMVTNNDQA
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCEEECCCCCC
>Mature Secondary Structure
MHPFLFSDHDDTLPSVQSEAGAPFRDLIGLSLAVKSCTKCRLSASRKNVVFGEGDPRAAL
CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE
VVIGEAPGADEDSQGRPFVGRSGQLLDKILQAVQFKREEVFICNILKCRPPQNRNPLADE
EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHH
IECCMPWLLLQLELLNPKLILLLGKVAANTILQNSLSMGAMRGRIVKWKAYDCMVTYHPA
HHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCH
ALLRNPGWKKACWEDVQMMRQHYDKLCSAEAHSRTMVTNNDQA
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA