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The map label for this gene is hdrB [H]

Identifier: 119356022

GI number: 119356022

Start: 200220

End: 201068

Strand: Reverse

Name: hdrB [H]

Synonym: Cpha266_0175

Alternate gene names: 119356022

Gene position: 201068-200220 (Counterclockwise)

Preceding gene: 119356023

Following gene: 119356021

Centisome position: 6.42

GC content: 47.82

Gene sequence:

>849_bases
ATGAAACGGTATGCATACTACCTGAGCTGTATAAACGAATCCATGACGAAGGAGCTCGACCGCTCAATCGACCTGTGGCA
AAAAGATCTTGATTTAGAACTGATCAAGCTGCATGAAAGCACATGTTGCGGAGGCAGCAACCTTGAGTATGTAAGTCCGA
AACATTTCGCGCTTGTCAATGCACGCAATATCGCACATGCTGAAAAACTCGGTCTTGATCTGGTCGTCTCCTGCAACACA
TGCCTGATGACCATACGAACGGCAAAGAAAAAGCTCGATTCATCTGCCGAACTGAAGTGTGAGGTCAATGAGATTTTGAA
AAAAGAAGGACTTGAATACAAAGGAACGTCGGAAGTTCGCCACCTGTTGTGGATATTGATCGAGGATGTCGGGCTTGACG
TGATCAAATCGAAAGTAAAGGTTCCGCTTAAAAACTATAAAATCGCCCCCTTTTACGGCTGTCATATTCTCAGACCATCG
ACAGTACTCGGCAAAGACAACCCCCTTGACCCAAGTTCGCTCGACCAGTTGATTGAAGCGCTTGGCGGAACAACCATACC
CTATGAGCATAAAAACCGCTGCTGCGGATTTCACACCCTGCTGGTGGCCGAAGAAGAGTCACTCAACGTTGCCGCAGAAG
CGCTCAACGAAGCCATCGAATCCAAAGCCGACTTTATTGTGACCCCCTGTCCGCTCTGCCATACCGTCCTTGACGGCTAT
CAGGCAAAAGCGCTCAAACAGGCTCATATCAATGCATCGATTCCTGTGTTTCATCTTTCGGAAATGGTAGGCCTTGCGCT
TGGCTACACCAAAAAGCAGCTTGGCATCAAAAGGCATATCGTCTCTTGA

Upstream 100 bases:

>100_bases
CAAGGGAATCAAGGCGTTCCGGGAAGAGTTCAGAGAGATGACGGAGCACGTCAAAGATGATCATCAGACACATAACAAAT
AATCGGGGGAGAATCGCGAG

Downstream 100 bases:

>100_bases
ACAAGAAATAAAGCAGATCGAGCAGCCGCTGCTCGATCTGCCGAAAAGTTTTAAAAAAAGGCTAAAAAAACGTAGCTTTG
CACGTTCACTTCGCTCTCAG

Product: succinate dehydrogenase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKRYAYYLSCINESMTKELDRSIDLWQKDLDLELIKLHESTCCGGSNLEYVSPKHFALVNARNIAHAEKLGLDLVVSCNT
CLMTIRTAKKKLDSSAELKCEVNEILKKEGLEYKGTSEVRHLLWILIEDVGLDVIKSKVKVPLKNYKIAPFYGCHILRPS
TVLGKDNPLDPSSLDQLIEALGGTTIPYEHKNRCCGFHTLLVAEEESLNVAAEALNEAIESKADFIVTPCPLCHTVLDGY
QAKALKQAHINASIPVFHLSEMVGLALGYTKKQLGIKRHIVS

Sequences:

>Translated_282_residues
MKRYAYYLSCINESMTKELDRSIDLWQKDLDLELIKLHESTCCGGSNLEYVSPKHFALVNARNIAHAEKLGLDLVVSCNT
CLMTIRTAKKKLDSSAELKCEVNEILKKEGLEYKGTSEVRHLLWILIEDVGLDVIKSKVKVPLKNYKIAPFYGCHILRPS
TVLGKDNPLDPSSLDQLIEALGGTTIPYEHKNRCCGFHTLLVAEEESLNVAAEALNEAIESKADFIVTPCPLCHTVLDGY
QAKALKQAHINASIPVFHLSEMVGLALGYTKKQLGIKRHIVS
>Mature_282_residues
MKRYAYYLSCINESMTKELDRSIDLWQKDLDLELIKLHESTCCGGSNLEYVSPKHFALVNARNIAHAEKLGLDLVVSCNT
CLMTIRTAKKKLDSSAELKCEVNEILKKEGLEYKGTSEVRHLLWILIEDVGLDVIKSKVKVPLKNYKIAPFYGCHILRPS
TVLGKDNPLDPSSLDQLIEALGGTTIPYEHKNRCCGFHTLLVAEEESLNVAAEALNEAIESKADFIVTPCPLCHTVLDGY
QAKALKQAHINASIPVFHLSEMVGLALGYTKKQLGIKRHIVS

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 31420; Mature: 31420

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: PS00071 GAPDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYAYYLSCINESMTKELDRSIDLWQKDLDLELIKLHESTCCGGSNLEYVSPKHFALVN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCCEECCCCEEEEE
ARNIAHAEKLGLDLVVSCNTCLMTIRTAKKKLDSSAELKCEVNEILKKEGLEYKGTSEVR
HHHHHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCHHHHH
HLLWILIEDVGLDVIKSKVKVPLKNYKIAPFYGCHILRPSTVLGKDNPLDPSSLDQLIEA
HHHHHHHHHHCHHHHHHHHCCCHHCEEECCEECEEEECCCEECCCCCCCCHHHHHHHHHH
LGGTTIPYEHKNRCCGFHTLLVAEEESLNVAAEALNEAIESKADFIVTPCPLCHTVLDGY
HCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCH
QAKALKQAHINASIPVFHLSEMVGLALGYTKKQLGIKRHIVS
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKRYAYYLSCINESMTKELDRSIDLWQKDLDLELIKLHESTCCGGSNLEYVSPKHFALVN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCCEECCCCEEEEE
ARNIAHAEKLGLDLVVSCNTCLMTIRTAKKKLDSSAELKCEVNEILKKEGLEYKGTSEVR
HHHHHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCHHHHH
HLLWILIEDVGLDVIKSKVKVPLKNYKIAPFYGCHILRPSTVLGKDNPLDPSSLDQLIEA
HHHHHHHHHHCHHHHHHHHCCCHHCEEECCEECEEEECCCEECCCCCCCCHHHHHHHHHH
LGGTTIPYEHKNRCCGFHTLLVAEEESLNVAAEALNEAIESKADFIVTPCPLCHTVLDGY
HCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCH
QAKALKQAHINASIPVFHLSEMVGLALGYTKKQLGIKRHIVS
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]