| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119355964
Identifier: 119355964
GI number: 119355964
Start: 134275
End: 134961
Strand: Direct
Name: 119355964
Synonym: Cpha266_0114
Alternate gene names: NA
Gene position: 134275-134961 (Clockwise)
Preceding gene: 119355963
Following gene: 119355965
Centisome position: 4.28
GC content: 53.28
Gene sequence:
>687_bases ATGAAAACAGCGTGGATTTCAAGGACGGGAGAATTGGAACTGCTCCTGTTTTTTGCCGGGTGGGGCATGGACAGCGCTCT TGCCGAGCATCTTTGGGCACATGACGACAAAGAGGGTTTCGGGATGGATATTCTTGCTTTTCATGATTACGGGTCTCTTG AAATAAGCCCCGGTATCAGGGAGCATTTCGAGTCCTATTCGAAAATTACCCTGATAGCCTGGTCGCTCGGAGTCTGGGCT GCCGCTCATGCGGCGTTGCCTCGTGTTGACCGGGCTGTCGCGCTCAACGGCACACTGCGCCCACTCAGCGAGCGATACGG GATTTCGCCGGAGGTTTTTTTTGCCACGCATGCCGGATGGAGTGAGCAAAACCGAACCCGCTTTTACCGGAGAATGTGCG GAAGCGGCGAAGCGCTTGATCACTTTCTCTCCATGGCCCCTCTGCGATCTCCCGCCGACCAGAAAGAGGAGCTTGGTTTT CTCGGAGAGAGCTTGATCGCTTCCGAAAATTCTCCTCTGCCATGGGGGTACGATCAGATCATTATTGGCGACAGGGATAT GGTTTTTCCTTTTCAACGCCAGGTGATAGCCTGGGATGGTTTCGGGGTGAGCCTTGTTGAGGGGATGCCCCATTTTCCTT TTTTTCATCTCAAGAGTTTCAGGGAGGTTTTGCTGTGTTGCAAGTGA
Upstream 100 bases:
>100_bases GTTCCTGAAAACAGCGCACGTCTTCGGCTTTCACTAAGGGCGGATTTGCAGTGGGAAGATATCGAGTCTGTTCCTGAACT TCTTCAAGGTTTATGAGATC
Downstream 100 bases:
>100_bases TCGACAAAGGGCTTGTGCGTGAGCGGTTTTCCAGAACCCTTCACTCCTACGGCAGCAATGCTCCGGTTCAGAATGCCATG GCTGTCGAACTTGCGCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKTAWISRTGELELLLFFAGWGMDSALAEHLWAHDDKEGFGMDILAFHDYGSLEISPGIREHFESYSKITLIAWSLGVWA AAHAALPRVDRAVALNGTLRPLSERYGISPEVFFATHAGWSEQNRTRFYRRMCGSGEALDHFLSMAPLRSPADQKEELGF LGESLIASENSPLPWGYDQIIIGDRDMVFPFQRQVIAWDGFGVSLVEGMPHFPFFHLKSFREVLLCCK
Sequences:
>Translated_228_residues MKTAWISRTGELELLLFFAGWGMDSALAEHLWAHDDKEGFGMDILAFHDYGSLEISPGIREHFESYSKITLIAWSLGVWA AAHAALPRVDRAVALNGTLRPLSERYGISPEVFFATHAGWSEQNRTRFYRRMCGSGEALDHFLSMAPLRSPADQKEELGF LGESLIASENSPLPWGYDQIIIGDRDMVFPFQRQVIAWDGFGVSLVEGMPHFPFFHLKSFREVLLCCK >Mature_228_residues MKTAWISRTGELELLLFFAGWGMDSALAEHLWAHDDKEGFGMDILAFHDYGSLEISPGIREHFESYSKITLIAWSLGVWA AAHAALPRVDRAVALNGTLRPLSERYGISPEVFFATHAGWSEQNRTRFYRRMCGSGEALDHFLSMAPLRSPADQKEELGF LGESLIASENSPLPWGYDQIIIGDRDMVFPFQRQVIAWDGFGVSLVEGMPHFPFFHLKSFREVLLCCK
Specific function: Unknown
COG id: COG2830
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007398 [H]
Pfam domain/function: PF04301 DUF452 [H]
EC number: NA
Molecular weight: Translated: 25758; Mature: 25758
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTAWISRTGELELLLFFAGWGMDSALAEHLWAHDDKEGFGMDILAFHDYGSLEISPGIR CCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEECCCHH EHFESYSKITLIAWSLGVWAAAHAALPRVDRAVALNGTLRPLSERYGISPEVFFATHAGW HHHHHHCEEEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHCCCCCEEEEEECCCC SEQNRTRFYRRMCGSGEALDHFLSMAPLRSPADQKEELGFLGESLIASENSPLPWGYDQI CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEE IIGDRDMVFPFQRQVIAWDGFGVSLVEGMPHFPFFHLKSFREVLLCCK EECCCCEECCCCCEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKTAWISRTGELELLLFFAGWGMDSALAEHLWAHDDKEGFGMDILAFHDYGSLEISPGIR CCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEECCCHH EHFESYSKITLIAWSLGVWAAAHAALPRVDRAVALNGTLRPLSERYGISPEVFFATHAGW HHHHHHCEEEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHCCCCCEEEEEECCCC SEQNRTRFYRRMCGSGEALDHFLSMAPLRSPADQKEELGFLGESLIASENSPLPWGYDQI CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEE IIGDRDMVFPFQRQVIAWDGFGVSLVEGMPHFPFFHLKSFREVLLCCK EECCCCEECCCCCEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]