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The map label for this gene is bioC [H]

Identifier: 119355965

GI number: 119355965

Start: 134949

End: 135731

Strand: Direct

Name: bioC [H]

Synonym: Cpha266_0115

Alternate gene names: 119355965

Gene position: 134949-135731 (Clockwise)

Preceding gene: 119355964

Following gene: 119355966

Centisome position: 4.31

GC content: 53.51

Gene sequence:

>783_bases
GTGTTGCAAGTGATCGACAAAGGGCTTGTGCGTGAGCGGTTTTCCAGAACCCTTCACTCCTACGGCAGCAATGCTCCGGT
TCAGAATGCCATGGCTGTCGAACTTGCGCGCCTGATCTGCCGGGAAGAGCCGACATGCCGGTTTGAGCGGGTGCTTGAGG
TCGGTGCCGGCACAGGCGCGCTTACGGCCGAACTGTTGAAGCGGTGCCGGATATCGCTCTATGTCGCAAACGATCTTGTG
GGAGAGAGTCTCCGGTATATATCGAGGGAGATCGAGCCGTGGCAGCCTGAAGCGTTTCGTTTTCTTGAGGGCGATGTCGA
AACCTTGACGGAACTTCCCGACAGGCTGGATCTCGTGCTCTCAAATGCAGCCCTCCAGTGGCTCAGCGACCTGGAGGGAT
TTTTCCGGAGAGTGTCGGCATTGCTCAAGCCGGGAGGTCTTTTTGCATTTACGACTTTCAGCGCAAGGAATATGGAGGAG
CTTTCATCGATACAGAAGGTCGGGCTTGCCTATCCAACAGCTCTTGATATAGAGCGTTTCGCATCGGGTTCTTTCACCCC
TCTCCTGATCCGCGAAGATCGAAAGCGGCTTGAATTCGCCTCTCCTGAAGAGGTGCTTCGCCACCTCAGCAGAACAGGAG
TGAACGGTATTTCACGTCATGCATGGACAAAAAGCAGCTATGAAAGATTTCTTCATCGATACAGGCAGGAGTTCTCCTCC
GGCGGCAAGGTTTACCTGACCTATAATCCGCTCTACTGTTGTTTCAGAAAACGTTTATCATGA

Upstream 100 bases:

>100_bases
AACGCCAGGTGATAGCCTGGGATGGTTTCGGGGTGAGCCTTGTTGAGGGGATGCCCCATTTTCCTTTTTTTCATCTCAAG
AGTTTCAGGGAGGTTTTGCT

Downstream 100 bases:

>100_bases
AAGGCAGCGTAACGGCAATATCCGGCATAGGCACCGGGGTTGGAAAAACCGTTGTGACCGGTCTTCTGGCTCAAGGGCTT
CAGAAATGCGATCGAAAAGT

Product: biotin biosynthesis protein BioC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLQVIDKGLVRERFSRTLHSYGSNAPVQNAMAVELARLICREEPTCRFERVLEVGAGTGALTAELLKRCRISLYVANDLV
GESLRYISREIEPWQPEAFRFLEGDVETLTELPDRLDLVLSNAALQWLSDLEGFFRRVSALLKPGGLFAFTTFSARNMEE
LSSIQKVGLAYPTALDIERFASGSFTPLLIREDRKRLEFASPEEVLRHLSRTGVNGISRHAWTKSSYERFLHRYRQEFSS
GGKVYLTYNPLYCCFRKRLS

Sequences:

>Translated_260_residues
MLQVIDKGLVRERFSRTLHSYGSNAPVQNAMAVELARLICREEPTCRFERVLEVGAGTGALTAELLKRCRISLYVANDLV
GESLRYISREIEPWQPEAFRFLEGDVETLTELPDRLDLVLSNAALQWLSDLEGFFRRVSALLKPGGLFAFTTFSARNMEE
LSSIQKVGLAYPTALDIERFASGSFTPLLIREDRKRLEFASPEEVLRHLSRTGVNGISRHAWTKSSYERFLHRYRQEFSS
GGKVYLTYNPLYCCFRKRLS
>Mature_260_residues
MLQVIDKGLVRERFSRTLHSYGSNAPVQNAMAVELARLICREEPTCRFERVLEVGAGTGALTAELLKRCRISLYVANDLV
GESLRYISREIEPWQPEAFRFLEGDVETLTELPDRLDLVLSNAALQWLSDLEGFFRRVSALLKPGGLFAFTTFSARNMEE
LSSIQKVGLAYPTALDIERFASGSFTPLLIREDRKRLEFASPEEVLRHLSRTGVNGISRHAWTKSSYERFLHRYRQEFSS
GGKVYLTYNPLYCCFRKRLS

Specific function: BioC is involved in an early, but chemically unexplored, step in the conversion of pimelic acid to biotin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011814
- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 29740; Mature: 29740

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQVIDKGLVRERFSRTLHSYGSNAPVQNAMAVELARLICREEPTCRFERVLEVGAGTGA
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH
LTAELLKRCRISLYVANDLVGESLRYISREIEPWQPEAFRFLEGDVETLTELPDRLDLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHCHHHHHHHH
SNAALQWLSDLEGFFRRVSALLKPGGLFAFTTFSARNMEELSSIQKVGLAYPTALDIERF
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHH
ASGSFTPLLIREDRKRLEFASPEEVLRHLSRTGVNGISRHAWTKSSYERFLHRYRQEFSS
CCCCCCEEEECCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCC
GGKVYLTYNPLYCCFRKRLS
CCEEEEEECHHHHHHHHHCC
>Mature Secondary Structure
MLQVIDKGLVRERFSRTLHSYGSNAPVQNAMAVELARLICREEPTCRFERVLEVGAGTGA
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH
LTAELLKRCRISLYVANDLVGESLRYISREIEPWQPEAFRFLEGDVETLTELPDRLDLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHCHHHHHHHH
SNAALQWLSDLEGFFRRVSALLKPGGLFAFTTFSARNMEELSSIQKVGLAYPTALDIERF
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHH
ASGSFTPLLIREDRKRLEFASPEEVLRHLSRTGVNGISRHAWTKSSYERFLHRYRQEFSS
CCCCCCEEEECCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCC
GGKVYLTYNPLYCCFRKRLS
CCEEEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]