| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119355945
Identifier: 119355945
GI number: 119355945
Start: 110135
End: 110608
Strand: Reverse
Name: 119355945
Synonym: Cpha266_0095
Alternate gene names: NA
Gene position: 110608-110135 (Counterclockwise)
Preceding gene: 119355946
Following gene: 119355944
Centisome position: 3.53
GC content: 53.38
Gene sequence:
>474_bases ATGAAAACAAAACCGAAAAAAATCATCTGTGCGGTAGATTTTTCGCCGCTGTCAGACAATCTGGTGACCTATGCCGCTGG ACTCAGACCATACGATGCGGAACTCACCCTCCTCTATATTGAAAAAGAGGGCAAAAGAACCCTGAACATGCTGCAGAATC GCCTGCACGCCTTCTCCCGCTACAGCGAGCTCCTTGTTCAAGCCAACAGAAGCGCCCGCTTCGCCGTAGAGTGCGGCGAC CCTGCCGCGGAAATTCTCGCCTATGCAGACCGCGTGCATGCAGATCTGCTTCTGCTTGGCTCTCATGGAAGCACGGCCTT CACCCGACTGCTCATGGGCAGTACAGCCGAAACCGTCCTGCGCAGAGCAGCCTGCCCGGTAGCCATCTATAAAGTCCCCG ACAGAAGAACTCCCGCAAGGAAACGGCAGGAAGCCACAACACTTCTTTTAAAAGACAACAAACAAACAGCATAA
Upstream 100 bases:
>100_bases CGCTTGCGCAGGCTGAGCTTTCGCGACTTCAGGCCGCTTACGACTATGTCATGAACAGCTATACCCTGAAACGCGCAACC GGAGAAACGTTCTGGTAATC
Downstream 100 bases:
>100_bases CATGGCCGAACAGGAAAAGAACATCGGAACCGCAGAAAAACCGGAAGAAAAAGCAACCAACCCGCTGCGTCTTGTCATCA CAGTCCTGCTCGTTCTGGCT
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKTKPKKIICAVDFSPLSDNLVTYAAGLRPYDAELTLLYIEKEGKRTLNMLQNRLHAFSRYSELLVQANRSARFAVECGD PAAEILAYADRVHADLLLLGSHGSTAFTRLLMGSTAETVLRRAACPVAIYKVPDRRTPARKRQEATTLLLKDNKQTA
Sequences:
>Translated_157_residues MKTKPKKIICAVDFSPLSDNLVTYAAGLRPYDAELTLLYIEKEGKRTLNMLQNRLHAFSRYSELLVQANRSARFAVECGD PAAEILAYADRVHADLLLLGSHGSTAFTRLLMGSTAETVLRRAACPVAIYKVPDRRTPARKRQEATTLLLKDNKQTA >Mature_157_residues MKTKPKKIICAVDFSPLSDNLVTYAAGLRPYDAELTLLYIEKEGKRTLNMLQNRLHAFSRYSELLVQANRSARFAVECGD PAAEILAYADRVHADLLLLGSHGSTAFTRLLMGSTAETVLRRAACPVAIYKVPDRRTPARKRQEATTLLLKDNKQTA
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17478; Mature: 17478
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKPKKIICAVDFSPLSDNLVTYAAGLRPYDAELTLLYIEKEGKRTLNMLQNRLHAFSR CCCCCCEEEEEEECCCCCCCCEEHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH YSELLVQANRSARFAVECGDPAAEILAYADRVHADLLLLGSHGSTAFTRLLMGSTAETVL HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHCCCHHHHH RRAACPVAIYKVPDRRTPARKRQEATTLLLKDNKQTA HHHCCCEEEEECCCCCCCHHHHHHHEEEEEECCCCCC >Mature Secondary Structure MKTKPKKIICAVDFSPLSDNLVTYAAGLRPYDAELTLLYIEKEGKRTLNMLQNRLHAFSR CCCCCCEEEEEEECCCCCCCCEEHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH YSELLVQANRSARFAVECGDPAAEILAYADRVHADLLLLGSHGSTAFTRLLMGSTAETVL HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHCCCHHHHH RRAACPVAIYKVPDRRTPARKRQEATTLLLKDNKQTA HHHCCCEEEEECCCCCCCHHHHHHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA