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The map label for this gene is bepC [H]

Identifier: 119355946

GI number: 119355946

Start: 110611

End: 111936

Strand: Reverse

Name: bepC [H]

Synonym: Cpha266_0096

Alternate gene names: 119355946

Gene position: 111936-110611 (Counterclockwise)

Preceding gene: 119355948

Following gene: 119355945

Centisome position: 3.57

GC content: 54.75

Gene sequence:

>1326_bases
ATGAAGAAGACGCTGAAAATACACGCATGCATAGCAACAGCCGCATTGATGCTGGCCATCCCCCACCGGACGGATGCCGT
CATGCCGCCTCCCGGCGCTCCGATGACGCTTGAAGAGACCATCATGCTTGTCAAAGAGAACAACCCTGCACTGAAAGCCG
CAGCCGAAGAGGTCAATGCCGCAGATGCCCGCATAAGGCAGCAAAAAAGCGCCTATTATCCGCAGATCTCCGCCAGTGCC
GGGTACCGGTACATCGATCCGGTCTCTGAAATGGGATTTGGAGGAAGCGAACCGTTGCAGTTTATGCCGAACAACAACTA
TGAGGCAAAAATATCGGCAAAGGCAACCCTGCTGGATTTCGGAAGACGAGGTGTTGAGATCGATCTTGCCGAATCAGGAA
AAAACTCAGCCGTCCACACCCTTACCCTGACCCGAAGAGACCTCTCCTTCAGCACGGTAGAGCTCTTTTACGGCATCCTT
TTTCTCCGTGAAAGCATCAGAGTCGAAGAAAAGGAGATTACTGCCCTCCAGAAAGCGTTCGACTATACCTCAAAGCGCTA
TCAGGCGGGAACAGCTACTCGATTCGATGTCCTCACGACCGACGTGCGCATTCAGGCCGCACGCTCAAAAAAACTCAATC
TCGAACATCAGGTGCGGCGAAATGAGCTCGCCCTTTACCGGCTGACGGGAATCGCGACCGACAGACCGCTCGAACTGAAA
GGATCGTTCTCCGTTCACCCTGCCAGGCCCCTTGAATCGACACTTGTTGCCGAGGCAATGAAACAGCGACCTGAAGTGCA
GCTTGCCGGCGAAAACGAACAGTCGGCAAAGCTCCGCCGCTCTCTTGCCGTAAAGGCAGGACTGCCTGTCGTGAGCGCAA
CAGCCTCATGGGGCGCAGCAAACGGCTATCAGCCTGATATCGACGAAATCCGCGAAAACATTGCTGCAGGAATTCATATC
GAACTGCCGATCTTTACAGGTTTCCGCACCACTGCGGAACGCCAGGAAGCGTCGGCAAGACTCCGTGCGGCGACACTGCG
AAAACTCGATACCGAGGAGCAGGTAAAAACGGATGTCGAAGAGACCCTGCACGCGCTTGAGACGGCACGAAAAAACATAC
TCACAACCCAGTCGCAGGTTCAGTTGGCCAATCTTGCCGCCGAACACGCCCGTGCACGCTACCAAAACGGTATCGCAACA
ACCCTCGACCTGCTCGATACCGAGTCATCGCTTGCGCAGGCTGAGCTTTCGCGACTTCAGGCCGCTTACGACTATGTCAT
GAACAGCTATACCCTGAAACGCGCAACCGGAGAAACGTTCTGGTAA

Upstream 100 bases:

>100_bases
AGCTCTATTTCCGGCACATAAATTGCAAGGTATACTTACAAAAGGCATCGTCAAGCCTCTTCCGGCTAAGCCGAAAGAAA
CCACTCCATAAAAAGCACCG

Downstream 100 bases:

>100_bases
TCATGAAAACAAAACCGAAAAAAATCATCTGTGCGGTAGATTTTTCGCCGCTGTCAGACAATCTGGTGACCTATGCCGCT
GGACTCAGACCATACGATGC

Product: outer membrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MKKTLKIHACIATAALMLAIPHRTDAVMPPPGAPMTLEETIMLVKENNPALKAAAEEVNAADARIRQQKSAYYPQISASA
GYRYIDPVSEMGFGGSEPLQFMPNNNYEAKISAKATLLDFGRRGVEIDLAESGKNSAVHTLTLTRRDLSFSTVELFYGIL
FLRESIRVEEKEITALQKAFDYTSKRYQAGTATRFDVLTTDVRIQAARSKKLNLEHQVRRNELALYRLTGIATDRPLELK
GSFSVHPARPLESTLVAEAMKQRPEVQLAGENEQSAKLRRSLAVKAGLPVVSATASWGAANGYQPDIDEIRENIAAGIHI
ELPIFTGFRTTAERQEASARLRAATLRKLDTEEQVKTDVEETLHALETARKNILTTQSQVQLANLAAEHARARYQNGIAT
TLDLLDTESSLAQAELSRLQAAYDYVMNSYTLKRATGETFW

Sequences:

>Translated_441_residues
MKKTLKIHACIATAALMLAIPHRTDAVMPPPGAPMTLEETIMLVKENNPALKAAAEEVNAADARIRQQKSAYYPQISASA
GYRYIDPVSEMGFGGSEPLQFMPNNNYEAKISAKATLLDFGRRGVEIDLAESGKNSAVHTLTLTRRDLSFSTVELFYGIL
FLRESIRVEEKEITALQKAFDYTSKRYQAGTATRFDVLTTDVRIQAARSKKLNLEHQVRRNELALYRLTGIATDRPLELK
GSFSVHPARPLESTLVAEAMKQRPEVQLAGENEQSAKLRRSLAVKAGLPVVSATASWGAANGYQPDIDEIRENIAAGIHI
ELPIFTGFRTTAERQEASARLRAATLRKLDTEEQVKTDVEETLHALETARKNILTTQSQVQLANLAAEHARARYQNGIAT
TLDLLDTESSLAQAELSRLQAAYDYVMNSYTLKRATGETFW
>Mature_441_residues
MKKTLKIHACIATAALMLAIPHRTDAVMPPPGAPMTLEETIMLVKENNPALKAAAEEVNAADARIRQQKSAYYPQISASA
GYRYIDPVSEMGFGGSEPLQFMPNNNYEAKISAKATLLDFGRRGVEIDLAESGKNSAVHTLTLTRRDLSFSTVELFYGIL
FLRESIRVEEKEITALQKAFDYTSKRYQAGTATRFDVLTTDVRIQAARSKKLNLEHQVRRNELALYRLTGIATDRPLELK
GSFSVHPARPLESTLVAEAMKQRPEVQLAGENEQSAKLRRSLAVKAGLPVVSATASWGAANGYQPDIDEIRENIAAGIHI
ELPIFTGFRTTAERQEASARLRAATLRKLDTEEQVKTDVEETLHALETARKNILTTQSQVQLANLAAEHARARYQNGIAT
TLDLLDTESSLAQAELSRLQAAYDYVMNSYTLKRATGETFW

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 48840; Mature: 48840

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLKIHACIATAALMLAIPHRTDAVMPPPGAPMTLEETIMLVKENNPALKAAAEEVNA
CCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHH
ADARIRQQKSAYYPQISASAGYRYIDPVSEMGFGGSEPLQFMPNNNYEAKISAKATLLDF
HHHHHHHHHHHCCCCEECCCCCEEECCHHHCCCCCCCCCEECCCCCCEEEEEEEHHHHHH
GRRGVEIDLAESGKNSAVHTLTLTRRDLSFSTVELFYGILFLRESIRVEEKEITALQKAF
CCCCCEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DYTSKRYQAGTATRFDVLTTDVRIQAARSKKLNLEHQVRRNELALYRLTGIATDRPLELK
HHHHHHHCCCCCCEEEEEEECEEEEECCCCCCCHHHHHHHCCEEEEEEECCCCCCCEEEC
GSFSVHPARPLESTLVAEAMKQRPEVQLAGENEQSAKLRRSLAVKAGLPVVSATASWGAA
CCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCC
NGYQPDIDEIRENIAAGIHIELPIFTGFRTTAERQEASARLRAATLRKLDTEEQVKTDVE
CCCCCCHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ETLHALETARKNILTTQSQVQLANLAAEHARARYQNGIATTLDLLDTESSLAQAELSRLQ
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHH
AAYDYVMNSYTLKRATGETFW
HHHHHHHCCEEEECCCCCCCC
>Mature Secondary Structure
MKKTLKIHACIATAALMLAIPHRTDAVMPPPGAPMTLEETIMLVKENNPALKAAAEEVNA
CCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHH
ADARIRQQKSAYYPQISASAGYRYIDPVSEMGFGGSEPLQFMPNNNYEAKISAKATLLDF
HHHHHHHHHHHCCCCEECCCCCEEECCHHHCCCCCCCCCEECCCCCCEEEEEEEHHHHHH
GRRGVEIDLAESGKNSAVHTLTLTRRDLSFSTVELFYGILFLRESIRVEEKEITALQKAF
CCCCCEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DYTSKRYQAGTATRFDVLTTDVRIQAARSKKLNLEHQVRRNELALYRLTGIATDRPLELK
HHHHHHHCCCCCCEEEEEEECEEEEECCCCCCCHHHHHHHCCEEEEEEECCCCCCCEEEC
GSFSVHPARPLESTLVAEAMKQRPEVQLAGENEQSAKLRRSLAVKAGLPVVSATASWGAA
CCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCC
NGYQPDIDEIRENIAAGIHIELPIFTGFRTTAERQEASARLRAATLRKLDTEEQVKTDVE
CCCCCCHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ETLHALETARKNILTTQSQVQLANLAAEHARARYQNGIATTLDLLDTESSLAQAELSRLQ
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHH
AAYDYVMNSYTLKRATGETFW
HHHHHHHCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]