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The map label for this gene is rng [H]

Identifier: 119355890

GI number: 119355890

Start: 40727

End: 42424

Strand: Direct

Name: rng [H]

Synonym: Cpha266_0040

Alternate gene names: 119355890

Gene position: 40727-42424 (Clockwise)

Preceding gene: 119355885

Following gene: 119355891

Centisome position: 1.3

GC content: 49.41

Gene sequence:

>1698_bases
ATGAAGAAGAGTCTGAACAAGCAATTATTAATGAACAAGACCGGGGATGAGATTCAGGTCGCGCTTGTTGAAGAGGGCCG
GTTGGCAGAACTGATTATTGAACGGCCGGAGAGTCGCAGAAGCATAGGTGATATTTATCTTGGACGGGTTCATAAGGTTG
TCGAAGGCCTGAAGGCCGCATTTGTCGACATCGGGCAGAAATCCGACGGCTTTCTGCATTTTTCCGATGTCGGTACGACC
ACTGAGGACTATCGTGCTCTTATTGAGGACGATGACGATGATGATACGACTGGAACAGATGAGAGCGACGGCGACGAGAT
TGCCGCAGTACTATCCCAGCCCGCGGTTTTGCCGGAACAAAACGGCAAGTCTTCGGCTCGAAGCGGTGCAAAACGTCTGA
CGGCTCCCGCTCAGGATGGCGAAGATGGCGGCAGGCGGCAGTCTTACACCCAGATGATTGCCGGTAAACTGAAACCCAAC
GATTCGATTCTTGTCCAGGTGATCAAGGAGCCTATCAGCACGAAAGGCTCTCGTCTTACTTCCGATATTACCATTGCCGG
ACGATTTATGGTGCTCCTTCCGTTCGGAGGAGGTCAGGTTGCGGTTTCAAGAAGGGTTATTGCGCGCAAGGAGCGATCCC
GGCTGAAAAAGCTGGTACGTTCCATGCTCCCGGATGGTTTTGGCGCCATTATCCGTACGGTAGCGGAAATGCAGGAGGAG
ACGCTTTTGAAGCAGGATCTTGAAAAGCTGCTGGCAAAGTGGACGCAAATCGAGGAAAAACTTCAGGACGCTGTTCCGCC
GCAGTTGATATTCAAGGAAGATACGATCATTTCAAGCGTGTTACGTGATTCTCTCAATGCTGACGTGACGGAAATAGTGG
CAAATTCGCCGGTCATTTATAAGGAGACGCTGAACTATATCCAGTGGGCCGCTCCTGAAATGGAAAAAAACGTTACGCTT
TATCAGGGCAAGCTTCCCCTTTTTGAGGGATACAGCATTGCCAAGGATGTTGAGTCTATCTTTTCAAGAAAGGTGTGGTT
GAAATCTGGCGGATATATTATTATCGAGCACACTGAGGCTATGGTTGTTATCGATGTTAACAGCGGACGATATGCCGCAA
AGCGGGAACAGGAGGAAAACTCTCTGAAAACGAATCTCGAGGCGGCTCGGGAGATTGTTCGGCAGTTGCGGCTCAGGGAT
ATCGGCGGAATCATTGTTGTTGATTTTATTGATATGCTCGATCAGAAAAACGCTAAAAAGGTTTATGACTCCATGCGAAC
CGAGCTTCGCAATGATCGTGCGAAATCGAATATTCTTCCCATGTCTGATTTCGGCATCATGCAGATTACCCGGGAAAGAA
TACGACCCAGCCTTATGCAGCGGATGGGCGATCAATGCCCTGCCTGCGGCGGCACGGGCGTCGTACAGGCGAGATTTACC
ACGATCAATCAGATCGAGCGCTGGCTGAGAAAATATGCGCTTCAGAATACCATGAAGTTGCAGCAGCTTGATCTCTATGT
CAGCCCGACTGTTGCCGAACCTCTGCAGCAGAGCGAAATGAATACGGAACTGAAATGGTTTCTGCAGCATTTGCTCTTTG
TTCGGGTAAAGCCGGATGAAAGTCTCCGAAGCGATGATTTCAGATTCTACAGTAGAAAAAACAATAAGGAGATCACCGCA
GAATACGGTGATCTCTAA

Upstream 100 bases:

>100_bases
CCCTCTGTCGGGCACAACGGTTCGAGTTTCGGCAGAATCAAGAGTTGTAAATTAAGGGGTCGACCCCCCTGTTCTTAACA
TAAAAAAATTGAATGAACGA

Downstream 100 bases:

>100_bases
ACAGAAACATGCAGTTATGACAAGCTATGCTTCATTGAAAGAGGAAATATCGGGTCTGGCTCCCCTCAGTGCCGTTCAGC
TTGCTGACTATCCCGATGCC

Product: ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MKKSLNKQLLMNKTGDEIQVALVEEGRLAELIIERPESRRSIGDIYLGRVHKVVEGLKAAFVDIGQKSDGFLHFSDVGTT
TEDYRALIEDDDDDDTTGTDESDGDEIAAVLSQPAVLPEQNGKSSARSGAKRLTAPAQDGEDGGRRQSYTQMIAGKLKPN
DSILVQVIKEPISTKGSRLTSDITIAGRFMVLLPFGGGQVAVSRRVIARKERSRLKKLVRSMLPDGFGAIIRTVAEMQEE
TLLKQDLEKLLAKWTQIEEKLQDAVPPQLIFKEDTIISSVLRDSLNADVTEIVANSPVIYKETLNYIQWAAPEMEKNVTL
YQGKLPLFEGYSIAKDVESIFSRKVWLKSGGYIIIEHTEAMVVIDVNSGRYAAKREQEENSLKTNLEAAREIVRQLRLRD
IGGIIVVDFIDMLDQKNAKKVYDSMRTELRNDRAKSNILPMSDFGIMQITRERIRPSLMQRMGDQCPACGGTGVVQARFT
TINQIERWLRKYALQNTMKLQQLDLYVSPTVAEPLQQSEMNTELKWFLQHLLFVRVKPDESLRSDDFRFYSRKNNKEITA
EYGDL

Sequences:

>Translated_565_residues
MKKSLNKQLLMNKTGDEIQVALVEEGRLAELIIERPESRRSIGDIYLGRVHKVVEGLKAAFVDIGQKSDGFLHFSDVGTT
TEDYRALIEDDDDDDTTGTDESDGDEIAAVLSQPAVLPEQNGKSSARSGAKRLTAPAQDGEDGGRRQSYTQMIAGKLKPN
DSILVQVIKEPISTKGSRLTSDITIAGRFMVLLPFGGGQVAVSRRVIARKERSRLKKLVRSMLPDGFGAIIRTVAEMQEE
TLLKQDLEKLLAKWTQIEEKLQDAVPPQLIFKEDTIISSVLRDSLNADVTEIVANSPVIYKETLNYIQWAAPEMEKNVTL
YQGKLPLFEGYSIAKDVESIFSRKVWLKSGGYIIIEHTEAMVVIDVNSGRYAAKREQEENSLKTNLEAAREIVRQLRLRD
IGGIIVVDFIDMLDQKNAKKVYDSMRTELRNDRAKSNILPMSDFGIMQITRERIRPSLMQRMGDQCPACGGTGVVQARFT
TINQIERWLRKYALQNTMKLQQLDLYVSPTVAEPLQQSEMNTELKWFLQHLLFVRVKPDESLRSDDFRFYSRKNNKEITA
EYGDL
>Mature_565_residues
MKKSLNKQLLMNKTGDEIQVALVEEGRLAELIIERPESRRSIGDIYLGRVHKVVEGLKAAFVDIGQKSDGFLHFSDVGTT
TEDYRALIEDDDDDDTTGTDESDGDEIAAVLSQPAVLPEQNGKSSARSGAKRLTAPAQDGEDGGRRQSYTQMIAGKLKPN
DSILVQVIKEPISTKGSRLTSDITIAGRFMVLLPFGGGQVAVSRRVIARKERSRLKKLVRSMLPDGFGAIIRTVAEMQEE
TLLKQDLEKLLAKWTQIEEKLQDAVPPQLIFKEDTIISSVLRDSLNADVTEIVANSPVIYKETLNYIQWAAPEMEKNVTL
YQGKLPLFEGYSIAKDVESIFSRKVWLKSGGYIIIEHTEAMVVIDVNSGRYAAKREQEENSLKTNLEAAREIVRQLRLRD
IGGIIVVDFIDMLDQKNAKKVYDSMRTELRNDRAKSNILPMSDFGIMQITRERIRPSLMQRMGDQCPACGGTGVVQARFT
TINQIERWLRKYALQNTMKLQQLDLYVSPTVAEPLQQSEMNTELKWFLQHLLFVRVKPDESLRSDDFRFYSRKNNKEITA
EYGDL

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=536, Percent_Identity=31.7164179104478, Blast_Score=255, Evalue=4e-69,
Organism=Escherichia coli, GI1787325, Length=350, Percent_Identity=37.4285714285714, Blast_Score=232, Evalue=6e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 63798; Mature: 63798

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLNKQLLMNKTGDEIQVALVEEGRLAELIIERPESRRSIGDIYLGRVHKVVEGLKAA
CCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FVDIGQKSDGFLHFSDVGTTTEDYRALIEDDDDDDTTGTDESDGDEIAAVLSQPAVLPEQ
HHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
NGKSSARSGAKRLTAPAQDGEDGGRRQSYTQMIAGKLKPNDSILVQVIKEPISTKGSRLT
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
SDITIAGRFMVLLPFGGGQVAVSRRVIARKERSRLKKLVRSMLPDGFGAIIRTVAEMQEE
CCEEEECEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TLLKQDLEKLLAKWTQIEEKLQDAVPPQLIFKEDTIISSVLRDSLNADVTEIVANSPVIY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHCCCCHHHHHCCCCEEH
KETLNYIQWAAPEMEKNVTLYQGKLPLFEGYSIAKDVESIFSRKVWLKSGGYIIIEHTEA
HHHHHHHHHCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHEEECCCEEEEEECCE
MVVIDVNSGRYAAKREQEENSLKTNLEAAREIVRQLRLRDIGGIIVVDFIDMLDQKNAKK
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHH
VYDSMRTELRNDRAKSNILPMSDFGIMQITRERIRPSLMQRMGDQCPACGGTGVVQARFT
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHH
TINQIERWLRKYALQNTMKLQQLDLYVSPTVAEPLQQSEMNTELKWFLQHLLFVRVKPDE
HHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCHHHHHHHHHHHEEEECCCC
SLRSDDFRFYSRKNNKEITAEYGDL
CCCCCCHHHHHCCCCCEEECCCCCC
>Mature Secondary Structure
MKKSLNKQLLMNKTGDEIQVALVEEGRLAELIIERPESRRSIGDIYLGRVHKVVEGLKAA
CCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FVDIGQKSDGFLHFSDVGTTTEDYRALIEDDDDDDTTGTDESDGDEIAAVLSQPAVLPEQ
HHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
NGKSSARSGAKRLTAPAQDGEDGGRRQSYTQMIAGKLKPNDSILVQVIKEPISTKGSRLT
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
SDITIAGRFMVLLPFGGGQVAVSRRVIARKERSRLKKLVRSMLPDGFGAIIRTVAEMQEE
CCEEEECEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TLLKQDLEKLLAKWTQIEEKLQDAVPPQLIFKEDTIISSVLRDSLNADVTEIVANSPVIY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHCCCCHHHHHCCCCEEH
KETLNYIQWAAPEMEKNVTLYQGKLPLFEGYSIAKDVESIFSRKVWLKSGGYIIIEHTEA
HHHHHHHHHCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHEEECCCEEEEEECCE
MVVIDVNSGRYAAKREQEENSLKTNLEAAREIVRQLRLRDIGGIIVVDFIDMLDQKNAKK
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHH
VYDSMRTELRNDRAKSNILPMSDFGIMQITRERIRPSLMQRMGDQCPACGGTGVVQARFT
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHH
TINQIERWLRKYALQNTMKLQQLDLYVSPTVAEPLQQSEMNTELKWFLQHLLFVRVKPDE
HHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCHHHHHHHHHHHEEEECCCC
SLRSDDFRFYSRKNNKEITAEYGDL
CCCCCCHHHHHCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]