| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580909
Identifier: 118580909
GI number: 118580909
Start: 2704204
End: 2705490
Strand: Reverse
Name: 118580909
Synonym: Ppro_2496
Alternate gene names: NA
Gene position: 2705490-2704204 (Counterclockwise)
Preceding gene: 118580910
Following gene: 118580908
Centisome position: 67.5
GC content: 66.51
Gene sequence:
>1287_bases ATGATTCTGTTTCGCACCCCCACCCATCGCCTGTTCGTGGCCTGTATCCTGCTCTTTCCCCTGCTGTCCGCCTGCACCGC TTTCTCCGCATGGGATACATCGTGGCAGCGCGGGGATGCGCCGCCGCCCGCCCCTCTGGCCGTGGAGCGTTCCCCGGTGC CAGCCGCTTCCGAAATGCCGGCAGGCGAAATCCCGGTTGCAGCTCCCCAGTTGCCGGACACCGTCGATCCCCCTCTGCCG GACCCTGGACGCCCGCCGGTTGTCAGCCAGGGCGATATCAGCTACGAAAATACCACCATAACCGAGGATGTGGTCTGGAG CGGGAGCGTGCTGGTGCGGGGATACCTGGTGATCGCTTCCCCGGCGACCGTGCGCATCGAACCGGGCACGGTGGTGCGTT TCATGAAATCGCTCCTTTCGCGGCAGACGCCCCGTCTGGTGGTCATGGGCAGGCTGCACTGCAACGGCTCTGCGGGGCAA CCGGTGCGCTTCACCCCCAACGTTGCCCGGCCCGAGCGGGGCGACTGGGGGGGGATCCTGCTGCTGTCCAGCGAGAAGCG CAACCAGTTGGACCATGTGCTCATCGAGGGGGCCACGGCGGGAATCGAGGCCGGTTTCTCAACCCTTTCCGCCACCGATG TCGCCATCCGCCGCTGCACCGTCGGCATGCTGCTGAGGGACAGCAGCGCGAGCCTCAGCGCCGCCAGCGTTGATGACTGC GAGACCGGGCTTGAACTCCTCGACAGCGAGGTCGACCTGCGGGACAGCGCCCTGAGCAGCAACCAGCGCGGCATTGTCGC TCGCCGCACCACCCTGGTCCTGCTCGCCGTCTCCCTCAGGGAGAACCAGCAGAGTGGCGTAACCGCGCTCGACTGCCGGG TCAGATTCACCTCCTGTCAACTGGCTGCCAACGGAGGCGGCGGCGCGCATCTGGCGGAAAGCGAGGGGAATATATCCGGG TCGCGTTTCGTGGCCAACCGTGGCGTCGGCCTGGAGCTGGTCTCTTCGCGCCTCAAGGTTCAGGGGAGTCTGTTTACGGC TACGGCCGGCGACGGCATGCGGGTCAACGACGGCCGCAGCCTGGTCTGGGGCAACTCCTTCGAGGGGAACAGCGGCTACA ACCTGGCCATCAGCGGCCATGACCGCATCGTTGCCGTGGGGAACTGGTGGGGCAGCGACCAGGAATCCAGTATTGCGGCG AAACTGCTGGACGGGACCAAGGACCCCCGCGGCGGCCGGGTCGAGTTCTTCCCCTGGCTGGTGCAGCGGCCGGTAAACGT ACCATGA
Upstream 100 bases:
>100_bases CCTGTTCCATTACCCTGCTGGCCATGGCCGACCAGCTGCTCTACCAGGCCAAGCGGACTGGGCGGAACCGCGTCCTGGTG GCGGAGGATGATGCCGCTTG
Downstream 100 bases:
>100_bases CCTCCCGTTCCCCCCTCACCATCTATCTGGATAACGCGGCCACGTCCCACCCCAAGCCGGAATGCGTCTACCAGGCCGTC GTGCATGCCATGCGCCACAT
Product: putative lipoprotein
Products: NA
Alternate protein names: Parallel Beta-Helix Repeat-Containing Protein; Parallel Beta-Helix Repeat Protein
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MILFRTPTHRLFVACILLFPLLSACTAFSAWDTSWQRGDAPPPAPLAVERSPVPAASEMPAGEIPVAAPQLPDTVDPPLP DPGRPPVVSQGDISYENTTITEDVVWSGSVLVRGYLVIASPATVRIEPGTVVRFMKSLLSRQTPRLVVMGRLHCNGSAGQ PVRFTPNVARPERGDWGGILLLSSEKRNQLDHVLIEGATAGIEAGFSTLSATDVAIRRCTVGMLLRDSSASLSAASVDDC ETGLELLDSEVDLRDSALSSNQRGIVARRTTLVLLAVSLRENQQSGVTALDCRVRFTSCQLAANGGGGAHLAESEGNISG SRFVANRGVGLELVSSRLKVQGSLFTATAGDGMRVNDGRSLVWGNSFEGNSGYNLAISGHDRIVAVGNWWGSDQESSIAA KLLDGTKDPRGGRVEFFPWLVQRPVNVP
Sequences:
>Translated_428_residues MILFRTPTHRLFVACILLFPLLSACTAFSAWDTSWQRGDAPPPAPLAVERSPVPAASEMPAGEIPVAAPQLPDTVDPPLP DPGRPPVVSQGDISYENTTITEDVVWSGSVLVRGYLVIASPATVRIEPGTVVRFMKSLLSRQTPRLVVMGRLHCNGSAGQ PVRFTPNVARPERGDWGGILLLSSEKRNQLDHVLIEGATAGIEAGFSTLSATDVAIRRCTVGMLLRDSSASLSAASVDDC ETGLELLDSEVDLRDSALSSNQRGIVARRTTLVLLAVSLRENQQSGVTALDCRVRFTSCQLAANGGGGAHLAESEGNISG SRFVANRGVGLELVSSRLKVQGSLFTATAGDGMRVNDGRSLVWGNSFEGNSGYNLAISGHDRIVAVGNWWGSDQESSIAA KLLDGTKDPRGGRVEFFPWLVQRPVNVP >Mature_428_residues MILFRTPTHRLFVACILLFPLLSACTAFSAWDTSWQRGDAPPPAPLAVERSPVPAASEMPAGEIPVAAPQLPDTVDPPLP DPGRPPVVSQGDISYENTTITEDVVWSGSVLVRGYLVIASPATVRIEPGTVVRFMKSLLSRQTPRLVVMGRLHCNGSAGQ PVRFTPNVARPERGDWGGILLLSSEKRNQLDHVLIEGATAGIEAGFSTLSATDVAIRRCTVGMLLRDSSASLSAASVDDC ETGLELLDSEVDLRDSALSSNQRGIVARRTTLVLLAVSLRENQQSGVTALDCRVRFTSCQLAANGGGGAHLAESEGNISG SRFVANRGVGLELVSSRLKVQGSLFTATAGDGMRVNDGRSLVWGNSFEGNSGYNLAISGHDRIVAVGNWWGSDQESSIAA KLLDGTKDPRGGRVEFFPWLVQRPVNVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45545; Mature: 45545
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILFRTPTHRLFVACILLFPLLSACTAFSAWDTSWQRGDAPPPAPLAVERSPVPAASEMP CEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCC AGEIPVAAPQLPDTVDPPLPDPGRPPVVSQGDISYENTTITEDVVWSGSVLVRGYLVIAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHEECCCEEEEEEEEEEC PATVRIEPGTVVRFMKSLLSRQTPRLVVMGRLHCNGSAGQPVRFTPNVARPERGDWGGIL CEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCEE LLSSEKRNQLDHVLIEGATAGIEAGFSTLSATDVAIRRCTVGMLLRDSSASLSAASVDDC EEECCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHH ETGLELLDSEVDLRDSALSSNQRGIVARRTTLVLLAVSLRENQQSGVTALDCRVRFTSCQ HHHHHHHCCCCCCHHHHHCCCCCCEEEEEEEEEEEEEEHHCCCCCCCEEEEEEEEEEEEE LAANGGGGAHLAESEGNISGSRFVANRGVGLELVSSRLKVQGSLFTATAGDGMRVNDGRS EEECCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHEECCEEEEEECCCCEEECCCCE LVWGNSFEGNSGYNLAISGHDRIVAVGNWWGSDQESSIAAKLLDGTKDPRGGRVEFFPWL EEECCCCCCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEHHH VQRPVNVP HCCCCCCC >Mature Secondary Structure MILFRTPTHRLFVACILLFPLLSACTAFSAWDTSWQRGDAPPPAPLAVERSPVPAASEMP CEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCC AGEIPVAAPQLPDTVDPPLPDPGRPPVVSQGDISYENTTITEDVVWSGSVLVRGYLVIAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHEECCCEEEEEEEEEEC PATVRIEPGTVVRFMKSLLSRQTPRLVVMGRLHCNGSAGQPVRFTPNVARPERGDWGGIL CEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCEE LLSSEKRNQLDHVLIEGATAGIEAGFSTLSATDVAIRRCTVGMLLRDSSASLSAASVDDC EEECCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHH ETGLELLDSEVDLRDSALSSNQRGIVARRTTLVLLAVSLRENQQSGVTALDCRVRFTSCQ HHHHHHHCCCCCCHHHHHCCCCCCEEEEEEEEEEEEEEHHCCCCCCCEEEEEEEEEEEEE LAANGGGGAHLAESEGNISGSRFVANRGVGLELVSSRLKVQGSLFTATAGDGMRVNDGRS EEECCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHEECCEEEEEECCCCEEECCCCE LVWGNSFEGNSGYNLAISGHDRIVAVGNWWGSDQESSIAAKLLDGTKDPRGGRVEFFPWL EEECCCCCCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEHHH VQRPVNVP HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA