| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is yfiQ [C]
Identifier: 118580013
GI number: 118580013
Start: 1698720
End: 1699391
Strand: Direct
Name: yfiQ [C]
Synonym: Ppro_1590
Alternate gene names: 118580013
Gene position: 1698720-1699391 (Clockwise)
Preceding gene: 118580012
Following gene: 118580014
Centisome position: 42.38
GC content: 56.25
Gene sequence:
>672_bases ATGACGACTGGAGACAGAATCGATGAATTCCTGCGAGCACGGTCGGATCGTGATCCCTTTCGCGAGCATGAAGTGAAGGA ATTACTCCGCGGACTGGGTCTATCCGTACCCAAAGGCATGTTTATTTCCCGCGGAACAAAGATCCTGTCCGTTGCCGGAC TCTCCTTTCCGCTGGTCGCCAAGGTTGTGTCATCACGGATTGCCTCCAAAAGCGACATCGGCGGTGTGCGGCTCGGCATA GGAAACGGGGATGAACTTCAAAAAGCAGTGTCGGAACTATCGCGGATGGAACATGCCGAAGGGGTCCTGGTGGAGGAGAT GGCCCGGCCCGGTTTCGAAGTGATTGTGGGCGGGATTGTGGACAACAGTTTCGGTCCCATCGTCATGTTCGGTCCGGGCG GTCTTTTCGTGGAGCTTTTCCGTGATGTATCCTTCGCCCTGGCGCCGGTTGACCGTCAGCAGGCCATCTGGCTGATGAAA GAGACCAAGGGGGAGAAGATCCTTAAGGGTTTTCGGGGGCAGCCTCCTCTGGACGTGTGTGCCTTGACCCACGTGATCGT GATGGTTTCTGAAGTGATTGCGAGCGGTCAGTTTCGGACCATCGACCTGAATCCGGTCATCCTCTACCCGTCAGGAACGC TGGTGCTGGACGCCAAGATGAGCAGGATTTGA
Upstream 100 bases:
>100_bases CCAGGCTCATGGAGAAAGGTAAGATACCCGTATATCCTTCCCCGGAGAGGGCCGTGCGGGCGCTGGCCATGCTGCTGCAT GGTCGGGGGGATGAAACCAG
Downstream 100 bases:
>100_bases CCACGTCCTGCTGCCCCAGGGGCGACAACTGCGCCAGATGCCCGGTCGGTGTCCCGATTCAGTCCTGCGCACCCCTCCCT GTCACACCTCTTATTCTGAG
Product: acyl-CoA synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTTGDRIDEFLRARSDRDPFREHEVKELLRGLGLSVPKGMFISRGTKILSVAGLSFPLVAKVVSSRIASKSDIGGVRLGI GNGDELQKAVSELSRMEHAEGVLVEEMARPGFEVIVGGIVDNSFGPIVMFGPGGLFVELFRDVSFALAPVDRQQAIWLMK ETKGEKILKGFRGQPPLDVCALTHVIVMVSEVIASGQFRTIDLNPVILYPSGTLVLDAKMSRI
Sequences:
>Translated_223_residues MTTGDRIDEFLRARSDRDPFREHEVKELLRGLGLSVPKGMFISRGTKILSVAGLSFPLVAKVVSSRIASKSDIGGVRLGI GNGDELQKAVSELSRMEHAEGVLVEEMARPGFEVIVGGIVDNSFGPIVMFGPGGLFVELFRDVSFALAPVDRQQAIWLMK ETKGEKILKGFRGQPPLDVCALTHVIVMVSEVIASGQFRTIDLNPVILYPSGTLVLDAKMSRI >Mature_222_residues TTGDRIDEFLRARSDRDPFREHEVKELLRGLGLSVPKGMFISRGTKILSVAGLSFPLVAKVVSSRIASKSDIGGVRLGIG NGDELQKAVSELSRMEHAEGVLVEEMARPGFEVIVGGIVDNSFGPIVMFGPGGLFVELFRDVSFALAPVDRQQAIWLMKE TKGEKILKGFRGQPPLDVCALTHVIVMVSEVIASGQFRTIDLNPVILYPSGTLVLDAKMSRI
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=211, Percent_Identity=27.9620853080569, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 24250; Mature: 24119
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGDRIDEFLRARSDRDPFREHEVKELLRGLGLSVPKGMFISRGTKILSVAGLSFPLVA CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEECCCCHHHHH KVVSSRIASKSDIGGVRLGIGNGDELQKAVSELSRMEHAEGVLVEEMARPGFEVIVGGIV HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEHHC DNSFGPIVMFGPGGLFVELFRDVSFALAPVDRQQAIWLMKETKGEKILKGFRGQPPLDVC CCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHEEHHHHCCCHHHHHCCCCCCCHHHH ALTHVIVMVSEVIASGQFRTIDLNPVILYPSGTLVLDAKMSRI HHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCEEEECCHHCC >Mature Secondary Structure TTGDRIDEFLRARSDRDPFREHEVKELLRGLGLSVPKGMFISRGTKILSVAGLSFPLVA CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEECCCCHHHHH KVVSSRIASKSDIGGVRLGIGNGDELQKAVSELSRMEHAEGVLVEEMARPGFEVIVGGIV HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEHHC DNSFGPIVMFGPGGLFVELFRDVSFALAPVDRQQAIWLMKETKGEKILKGFRGQPPLDVC CCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHEEHHHHCCCHHHHHCCCCCCCHHHH ALTHVIVMVSEVIASGQFRTIDLNPVILYPSGTLVLDAKMSRI HHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCEEEECCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]