Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is yfiQ [C]

Identifier: 118580012

GI number: 118580012

Start: 1697368

End: 1698723

Strand: Direct

Name: yfiQ [C]

Synonym: Ppro_1589

Alternate gene names: 118580012

Gene position: 1697368-1698723 (Clockwise)

Preceding gene: 118580011

Following gene: 118580013

Centisome position: 42.35

GC content: 61.28

Gene sequence:

>1356_bases
ATGGCGGAGCTTGATTCACTCTTTTCCCCCACACGTGTCGCCCTCATCGGGGCAGCGGCGAGCGAGGAGAAACTGGGGGG
CATTGTCCTGAAAAACCTGCTCGGTTTGAAAGGGGAGGTGTATCCGGTCAATCCCAACTATGCGGAACTCATGGGGCGCA
CAGCCTATCGCTCCATAGGTGATCTCCCCTGTCCCGTGGATCTCTCCATCATCATGCGTCCCGCGGCAGAGGTTCCCGGC
ATCCTGCACCAGCACGCGGGCAAGGTCCGGTTTGCGCTGATAGTAAGCGCCGGATTCGCTGAAGTCGGCGCCTGGGAGTT
GCAGGAAGAGATTAAGCACATCGGCAGGGAAGCCGGAATCAGGCTCATAGGGCCGAACTGTCTCGGCGTTTACAATCCCC
GCCACGGCCTGGATACGATGTTTCTCCCCCATGCGCTGTTGAAAAAACCGGGCAAGGGGAACGTGGCGATCGTTTCCCAG
AGCGGCGCGCTCGTGGTCTGCCTGTTGGAGGCGGTCCGGCAGGCGAACATGGGCGTTTCAAAGGTCATCAATTATGGAAA
CGCAGTCGACCTGGACGCGGCCGATGTGTACGAATACCTGGCCGAAGACCGGGAAACCCGCGTGGTCATTTCATACCTGG
AATCCGTCGGCAACGGCCGCAGGTTCATCGAAGCGGCGCGGAATCTGGATAACACCAAGCCTCTGCTTGTCCTCAAGGCG
GGCAAGGGAGCCGGTGGCCAGAAGGCTGCATGTTCCCATACCGGGCGGCTTGCCGGCAGCTACGAGGTGTTCCGCTCGAT
CCTCAGACAGTTCCGGATACAGGAGGCCATTGATTACGAGTCCCTTCTGGATGGGGCGAAAGCCCTGTCGCTGCAGCGGC
CGGCGTCCGGGAAACGGGTCTGCGTCATCACCAATGGCGGCGGTTCGGGGGTGCTGGCCGCGGATGAGTGTGGCCGGGCC
GGACTGGAACTCCCACCCCTGCCCGAAGCGGTCGTGGAACGTCTCATAGTGTCTTTCCCCTCATTTTACGCCATCGCTAA
CCCCATCGATCTCACCGGCCAGGTGAGGGCGGAGGATTACCGGGTGGCCCTCGATGCGGTGCGCGAAGCCTATGACGGGT
TCATCGTCATAGCCCTGACCGCAGTCTCCGGGGTTACCCTGGCGGTGGCAGAGATGGTGCACGATTTTAGCATGGCAACG
GGCAAGCCGGTGGTTGCCCATGTCGCTCAGGGCGGAATCTCCCGCAAACTGGCCAGGCTCATGGAGAAAGGTAAGATACC
CGTATATCCTTCCCCGGAGAGGGCCGTGCGGGCGCTGGCCATGCTGCTGCATGGTCGGGGGGATGAAACCAGATGA

Upstream 100 bases:

>100_bases
ATACTGATAGGCAATCAGACTGTTTAAGAATTGGATTCGTCTGATAAAAACGAATTTCTACGTAAACACCGATCTATCAC
GATACCGGAAGGACCTGGGC

Downstream 100 bases:

>100_bases
CGACTGGAGACAGAATCGATGAATTCCTGCGAGCACGGTCGGATCGTGATCCCTTTCGCGAGCATGAAGTGAAGGAATTA
CTCCGCGGACTGGGTCTATC

Product: CoA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MAELDSLFSPTRVALIGAAASEEKLGGIVLKNLLGLKGEVYPVNPNYAELMGRTAYRSIGDLPCPVDLSIIMRPAAEVPG
ILHQHAGKVRFALIVSAGFAEVGAWELQEEIKHIGREAGIRLIGPNCLGVYNPRHGLDTMFLPHALLKKPGKGNVAIVSQ
SGALVVCLLEAVRQANMGVSKVINYGNAVDLDAADVYEYLAEDRETRVVISYLESVGNGRRFIEAARNLDNTKPLLVLKA
GKGAGGQKAACSHTGRLAGSYEVFRSILRQFRIQEAIDYESLLDGAKALSLQRPASGKRVCVITNGGGSGVLAADECGRA
GLELPPLPEAVVERLIVSFPSFYAIANPIDLTGQVRAEDYRVALDAVREAYDGFIVIALTAVSGVTLAVAEMVHDFSMAT
GKPVVAHVAQGGISRKLARLMEKGKIPVYPSPERAVRALAMLLHGRGDETR

Sequences:

>Translated_451_residues
MAELDSLFSPTRVALIGAAASEEKLGGIVLKNLLGLKGEVYPVNPNYAELMGRTAYRSIGDLPCPVDLSIIMRPAAEVPG
ILHQHAGKVRFALIVSAGFAEVGAWELQEEIKHIGREAGIRLIGPNCLGVYNPRHGLDTMFLPHALLKKPGKGNVAIVSQ
SGALVVCLLEAVRQANMGVSKVINYGNAVDLDAADVYEYLAEDRETRVVISYLESVGNGRRFIEAARNLDNTKPLLVLKA
GKGAGGQKAACSHTGRLAGSYEVFRSILRQFRIQEAIDYESLLDGAKALSLQRPASGKRVCVITNGGGSGVLAADECGRA
GLELPPLPEAVVERLIVSFPSFYAIANPIDLTGQVRAEDYRVALDAVREAYDGFIVIALTAVSGVTLAVAEMVHDFSMAT
GKPVVAHVAQGGISRKLARLMEKGKIPVYPSPERAVRALAMLLHGRGDETR
>Mature_450_residues
AELDSLFSPTRVALIGAAASEEKLGGIVLKNLLGLKGEVYPVNPNYAELMGRTAYRSIGDLPCPVDLSIIMRPAAEVPGI
LHQHAGKVRFALIVSAGFAEVGAWELQEEIKHIGREAGIRLIGPNCLGVYNPRHGLDTMFLPHALLKKPGKGNVAIVSQS
GALVVCLLEAVRQANMGVSKVINYGNAVDLDAADVYEYLAEDRETRVVISYLESVGNGRRFIEAARNLDNTKPLLVLKAG
KGAGGQKAACSHTGRLAGSYEVFRSILRQFRIQEAIDYESLLDGAKALSLQRPASGKRVCVITNGGGSGVLAADECGRAG
LELPPLPEAVVERLIVSFPSFYAIANPIDLTGQVRAEDYRVALDAVREAYDGFIVIALTAVSGVTLAVAEMVHDFSMATG
KPVVAHVAQGGISRKLARLMEKGKIPVYPSPERAVRALAMLLHGRGDETR

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=457, Percent_Identity=27.3522975929978, Blast_Score=182, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 48150; Mature: 48019

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELDSLFSPTRVALIGAAASEEKLGGIVLKNLLGLKGEVYPVNPNYAELMGRTAYRSIG
CCCCHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
DLPCPVDLSIIMRPAAEVPGILHQHAGKVRFALIVSAGFAEVGAWELQEEIKHIGREAGI
CCCCCCCHHHHCCCHHHCCHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCE
RLIGPNCLGVYNPRHGLDTMFLPHALLKKPGKGNVAIVSQSGALVVCLLEAVRQANMGVS
EEECCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHH
KVINYGNAVDLDAADVYEYLAEDRETRVVISYLESVGNGRRFIEAARNLDNTKPLLVLKA
HHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEC
GKGAGGQKAACSHTGRLAGSYEVFRSILRQFRIQEAIDYESLLDGAKALSLQRPASGKRV
CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEE
CVITNGGGSGVLAADECGRAGLELPPLPEAVVERLIVSFPSFYAIANPIDLTGQVRAEDY
EEEECCCCCCEEEHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCEEHHHH
RVALDAVREAYDGFIVIALTAVSGVTLAVAEMVHDFSMATGKPVVAHVAQGGISRKLARL
HHHHHHHHHHHCCEEEEEEHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH
MEKGKIPVYPSPERAVRALAMLLHGRGDETR
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AELDSLFSPTRVALIGAAASEEKLGGIVLKNLLGLKGEVYPVNPNYAELMGRTAYRSIG
CCCHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
DLPCPVDLSIIMRPAAEVPGILHQHAGKVRFALIVSAGFAEVGAWELQEEIKHIGREAGI
CCCCCCCHHHHCCCHHHCCHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCE
RLIGPNCLGVYNPRHGLDTMFLPHALLKKPGKGNVAIVSQSGALVVCLLEAVRQANMGVS
EEECCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHH
KVINYGNAVDLDAADVYEYLAEDRETRVVISYLESVGNGRRFIEAARNLDNTKPLLVLKA
HHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEC
GKGAGGQKAACSHTGRLAGSYEVFRSILRQFRIQEAIDYESLLDGAKALSLQRPASGKRV
CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEE
CVITNGGGSGVLAADECGRAGLELPPLPEAVVERLIVSFPSFYAIANPIDLTGQVRAEDY
EEEECCCCCCEEEHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCEEHHHH
RVALDAVREAYDGFIVIALTAVSGVTLAVAEMVHDFSMATGKPVVAHVAQGGISRKLARL
HHHHHHHHHHHCCEEEEEEHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH
MEKGKIPVYPSPERAVRALAMLLHGRGDETR
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]